BLASTX 7.6.2
Query= UN47848 /QuerySize=704
(703 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S... 284 4e-077
TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S... 274 5e-074
TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S... 273 7e-074
>TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S19 (RPS19C) |
chr5:24611158-24612202 FORWARD
Length = 144
Score = 284 bits (726), Expect = 4e-077
Identities = 139/144 (96%), Positives = 141/144 (97%)
Frame = -3
Query: 641 MATGKTVKDMSPHEFVKAYAAHLKRSGKIELPPWTDIVKTGKLKELAPYDPDWYYIRAAS 462
MATGKTVKD+SPHEFVKAYAAHLKRSGKIELP WTDIVKTGKLKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHEFVKAYAAHLKRSGKIELPLWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 461 MARKVYLRGGLGVGGFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMSIVDLDTKG 282
MARKVYLRGGLGVG FRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTM+IVDLDTKG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMNIVDLDTKG 120
Query: 281 GRKITSSGQRDLDQVAGRIAAAV* 210
GRKITSSGQRDLDQVAGRIAAAV*
Sbjct: 121 GRKITSSGQRDLDQVAGRIAAAV* 144
>TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S19 (RPS19B) |
chr5:5037242-5038136 REVERSE
Length = 144
Score = 274 bits (699), Expect = 5e-074
Identities = 130/141 (92%), Positives = 139/141 (98%)
Frame = -3
Query: 641 MATGKTVKDMSPHEFVKAYAAHLKRSGKIELPPWTDIVKTGKLKELAPYDPDWYYIRAAS 462
MATGKTVKD+SPH+FVKAYA+HLKRSGKIELP WTDIVKTG+LKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPLWTDIVKTGRLKELAPYDPDWYYIRAAS 60
Query: 461 MARKVYLRGGLGVGGFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMSIVDLDTKG 282
MARK+YLRGGLGVG FRRIYGGSKRNGSRPPHFCKSSGG+ARHILQQL+TMSIV+LDTKG
Sbjct: 61 MARKIYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMSIVELDTKG 120
Query: 281 GRKITSSGQRDLDQVAGRIAA 219
GR+ITSSGQRDLDQVAGRIAA
Sbjct: 121 GRRITSSGQRDLDQVAGRIAA 141
>TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S19 (RPS19A) |
chr3:364138-365161 REVERSE
Length = 144
Score = 273 bits (698), Expect = 7e-074
Identities = 130/140 (92%), Positives = 138/140 (98%)
Frame = -3
Query: 641 MATGKTVKDMSPHEFVKAYAAHLKRSGKIELPPWTDIVKTGKLKELAPYDPDWYYIRAAS 462
MATGKTVKD+SPH+FVKAYA+HLKRSGKIELP WTDIVKTGKLKELAPYDPDWYYIRAAS
Sbjct: 1 MATGKTVKDVSPHDFVKAYASHLKRSGKIELPTWTDIVKTGKLKELAPYDPDWYYIRAAS 60
Query: 461 MARKVYLRGGLGVGGFRRIYGGSKRNGSRPPHFCKSSGGVARHILQQLQTMSIVDLDTKG 282
MARKVYLRGGLGVG FRRIYGGSKRNGSRPPHFCKSSGG+ARHILQQL+TM+IV+LDTKG
Sbjct: 61 MARKVYLRGGLGVGAFRRIYGGSKRNGSRPPHFCKSSGGIARHILQQLETMNIVELDTKG 120
Query: 281 GRKITSSGQRDLDQVAGRIA 222
GR+ITSSGQRDLDQVAGRIA
Sbjct: 121 GRRITSSGQRDLDQVAGRIA 140
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0
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