BLASTX 7.6.2
Query= UN47959 /QuerySize=997
(996 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15236326|ref|NP_192260.1| E3 ubiquitin-protein ligase RMA1 [A... 362 6e-098
gi|297809777|ref|XP_002872772.1| hypothetical protein ARALYDRAFT... 347 2e-093
gi|255639433|gb|ACU20011.1| unknown [Glycine max] 192 8e-047
gi|22795037|gb|AAN05420.1| putative RING protein [Populus tremul... 168 2e-039
gi|297803354|ref|XP_002869561.1| zinc finger family protein [Ara... 158 2e-036
gi|30687607|ref|NP_194477.2| E3 ubiquitin-protein ligase RMA3 [A... 153 4e-035
gi|4972072|emb|CAB43879.1| putative RING zinc finger protein [Ar... 134 3e-029
gi|302143025|emb|CBI20320.3| unnamed protein product [Vitis vini... 126 7e-027
gi|255635730|gb|ACU18214.1| unknown [Glycine max] 124 4e-026
gi|255553769|ref|XP_002517925.1| rnf5, putative [Ricinus communis] 123 6e-026
gi|225446337|ref|XP_002272136.1| PREDICTED: similar to ring doma... 122 8e-026
gi|224121892|ref|XP_002330679.1| predicted protein [Populus tric... 122 1e-025
gi|255638201|gb|ACU19414.1| unknown [Glycine max] 122 1e-025
gi|297792779|ref|XP_002864274.1| hypothetical protein ARALYDRAFT... 122 1e-025
gi|224128161|ref|XP_002329096.1| predicted protein [Populus tric... 121 2e-025
gi|224127182|ref|XP_002329420.1| predicted protein [Populus tric... 121 2e-025
gi|225461411|ref|XP_002282248.1| PREDICTED: hypothetical protein... 121 2e-025
gi|224114956|ref|XP_002316902.1| predicted protein [Populus tric... 116 7e-024
gi|297850320|ref|XP_002893041.1| zinc finger family protein [Ara... 110 4e-022
gi|18394721|ref|NP_564078.1| RING/U-box domain-containing protei... 109 9e-022
>gi|15236326|ref|NP_192260.1| E3 ubiquitin-protein ligase RMA1 [Arabidopsis
thaliana]
Length = 249
Score = 362 bits (928), Expect = 6e-098
Identities = 189/255 (74%), Positives = 215/255 (84%), Gaps = 16/255 (6%)
Frame = +3
Query: 153 MAMDQSFEDAS--GELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQE 326
MA+DQSFEDA+ GELYGEGAF F + KP+PIT S+ PSDD DS+FDCNICLDSVQE
Sbjct: 1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSV-PSDD--TDDSNFDCNICLDSVQE 57
Query: 327 PVVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNS 500
PVVTLCGHLFCWPCIHKWL VQ +T +++QRH +QCPVCKSKVS STLVPLYGRG +
Sbjct: 58 PVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH-RQCPVCKSKVSHSTLVPLYGRGRCTT 116
Query: 501 QDKDKTCAVPRR---PVYKLEMANS---STDVRLSQRVHFNNRHDGYYPVSGVMSSNSLS 662
Q++ K +VP+R PVY+LEM NS STD+RLSQRVHFN+ +GYYPVSGVMSSNSLS
Sbjct: 117 QEEGKN-SVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLS 175
Query: 663 YSPVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRI 842
YS V+DP+MVMVGEMVATRLFGTRVMDRF YPDTYNLA TS PRMRR+IM+ADKSLGRI
Sbjct: 176 YS-AVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRI 234
Query: 843 FLFLLCCVALCLVLF 887
F F +CCV LCL+LF
Sbjct: 235 FFFFMCCVVLCLLLF 249
>gi|297809777|ref|XP_002872772.1| hypothetical protein ARALYDRAFT_911843
[Arabidopsis lyrata subsp. lyrata]
Length = 246
Score = 347 bits (889), Expect = 2e-093
Identities = 181/253 (71%), Positives = 206/253 (81%), Gaps = 15/253 (5%)
Frame = +3
Query: 153 MAMDQSFEDASGELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPV 332
MA+DQS EDAS LYGEGAF F + KP+PI+ S+ D D DS+FDCNICLDSVQEPV
Sbjct: 1 MALDQSLEDAS-VLYGEGAFCFKSKKPEPISVSVSSDDGD---DSNFDCNICLDSVQEPV 56
Query: 333 VTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNSQD 506
VTLCGHLFCWPCIHKWL VQ +T +++QRH +QCPVCKSKVS STLVPLYGRG +Q+
Sbjct: 57 VTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH-RQCPVCKSKVSHSTLVPLYGRGRCTTQE 115
Query: 507 KDKTCAVPRR---PVYKLEMAN---SSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYS 668
+ K P+R PVY+ EM N SSTD+RLSQRVHFN+ +GYYPVSGVMSSNSLSYS
Sbjct: 116 EGKNIG-PKRPVGPVYRFEMPNSPYSSTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLSYS 174
Query: 669 PVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFL 848
V+DP+MVMVGEMVATRLFGTRVMDRF YPDTYNLA TS PRMR +IM+ADKSLGRIF
Sbjct: 175 -AVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRWRIMQADKSLGRIFF 233
Query: 849 FLLCCVALCLVLF 887
F +CCV LCL+LF
Sbjct: 234 FFMCCVVLCLLLF 246
>gi|255639433|gb|ACU20011.1| unknown [Glycine max]
Length = 249
Score = 192 bits (487), Expect = 8e-047
Identities = 94/216 (43%), Positives = 134/216 (62%), Gaps = 7/216 (3%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
+D D N FDCNICL+ VQ+PVVTLC HL+CWPCI+KWL++QT +++ +QCPVC
Sbjct: 34 ADSDRNASGGFDCNICLECVQDPVVTLCDHLYCWPCIYKWLNLQTASSENEEEKQQCPVC 93
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDK----TCAVPRRPV-YKLEMANSSTDVRLSQRVHFN 605
KS++S S+LVPLYGRG K K +PRRP+ L+ A S + H+
Sbjct: 94 KSEISQSSLVPLYGRGQTVLPSKGKGHQVGVVIPRRPLGPTLDSATVSPPISHVYHRHYP 153
Query: 606 NRHDGYYPVSGVMSS--NSLSYSPVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLA 779
N + + G +S N+ D + GEM+ R+FG ++ + +TYP++Y+L+
Sbjct: 154 NHPQQFNSIPGSYTSMFNTGGSLANAFDTTYGVFGEMIYARVFGNQMTNTYTYPNSYDLS 213
Query: 780 ETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF 887
S PR+RR +M+ D+SL RI FLLCC+ LCL+LF
Sbjct: 214 RNSNPRIRRHLMQVDRSLNRITFFLLCCIVLCLLLF 249
>gi|22795037|gb|AAN05420.1| putative RING protein [Populus tremula x Populus
alba]
Length = 233
Score = 168 bits (423), Expect = 2e-039
Identities = 92/224 (41%), Positives = 123/224 (54%), Gaps = 23/224 (10%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
+ D N FDCNIC D EPVVTLCGHL+CWPCI+KWLHVQ+ H QCPVC
Sbjct: 18 ASDSENPSGCFDCNICFDFAHEPVVTLCGHLYCWPCIYKWLHVQSASLASDEH-PQCPVC 76
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDKT----CAVPRRPVYKLEMANSSTDVRLSQRVHFNN 608
K+ +S +T+VPLYGRG G+++ + KT +P RP S QR+ + N
Sbjct: 77 KADISHTTMVPLYGRGQGSTEAEGKTPYRGMIIPPRPSACGAQGVVSNTSNTGQRLPYRN 136
Query: 609 RHDGY-YPVSGVMSSNSLSYSPV----------VMDPMMVMVGEMVATRLFGTRVMDRFT 755
+ + Y + S S SP+ + P + M EMV R+FG
Sbjct: 137 PYRNHNYNANPYGSFEEASPSPLLNLGDPAMTGLQQPAVGMFREMVYARVFG-------P 189
Query: 756 YPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF 887
+P++Y+L T PR+RR + ADKSL RI +FL CC LCL++F
Sbjct: 190 FPNSYHLMGTGSPRLRRHELMADKSLNRISIFLFCCFLLCLIVF 233
>gi|297803354|ref|XP_002869561.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 243
Score = 158 bits (398), Expect = 2e-036
Identities = 90/232 (38%), Positives = 126/232 (54%), Gaps = 24/232 (10%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ 407
KP+ ITA P+ N FDCNICLD+ +PVVTLCGHLFCWPCI+KWLHVQ +
Sbjct: 24 KPNLITA---PTGGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVS 80
Query: 408 HQRHNKQCPVCKSKVSLSTLVPLYGRG--------GGNSQDKDKTCAVPRRP----VYKL 551
+H+ CPVCKS +++++LVPLYGRG G QD T +PRRP +
Sbjct: 81 IDQHHNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDAQST-DIPRRPAPSTLNSP 139
Query: 552 EMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYSPVVMDPMMVMVGEMVATRLFG 731
+ SS + L + + H+ Y G ++ S + VM + V +FG
Sbjct: 140 ITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPV-----IGMFG 194
Query: 732 TRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF 887
V R T +A+ P +++M+ +KSL R+ +F LCC+ LCL+LF
Sbjct: 195 DMVYTRIFGTFTNTIAQ---PYQSQRMMQREKSLNRVSIFFLCCIILCLLLF 243
>gi|30687607|ref|NP_194477.2| E3 ubiquitin-protein ligase RMA3 [Arabidopsis
thaliana]
Length = 243
Score = 153 bits (386), Expect = 4e-035
Identities = 89/232 (38%), Positives = 124/232 (53%), Gaps = 24/232 (10%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ 407
KP+ TA P+ N FDCNICLD+ +PVVTLCGHLFCWPCI+KWLHVQ +
Sbjct: 24 KPNLTTA---PTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVS 80
Query: 408 HQRHNKQCPVCKSKVSLSTLVPLYGRG--------GGNSQDKDKTCAVPRRP----VYKL 551
+H CPVCKS +++++LVPLYGRG G QD T +PRRP +
Sbjct: 81 VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALST-DIPRRPAPSALRNP 139
Query: 552 EMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYSPVVMDPMMVMVGEMVATRLFG 731
+ SS + L + + H+ Y G ++ S + VM + V +FG
Sbjct: 140 ITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPV-----IGMFG 194
Query: 732 TRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF 887
V R T +A+ P +++M+ +KSL R+ +F LCC+ LCL+LF
Sbjct: 195 DLVYTRIFGTFTNTIAQ---PYQSQRMMQREKSLNRVSIFFLCCIILCLLLF 243
>gi|4972072|emb|CAB43879.1| putative RING zinc finger protein [Arabidopsis
thaliana]
Length = 264
Score = 134 bits (335), Expect = 3e-029
Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 24/223 (10%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ 407
KP+ TA P+ N FDCNICLD+ +PVVTLCGHLFCWPCI+KWLHVQ +
Sbjct: 36 KPNLTTA---PTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVS 92
Query: 408 HQRHNKQCPVCKSKVSLSTLVPLYGRG--------GGNSQDKDKTCAVPRRP----VYKL 551
+H CPVCKS +++++LVPLYGRG G QD T +PRRP +
Sbjct: 93 VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALST-DIPRRPAPSALRNP 151
Query: 552 EMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYSPVVMDPMMVMVGEMVATRLFG 731
+ SS + L + + H+ Y G ++ S + VM + V +FG
Sbjct: 152 ITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPV-----IGMFG 206
Query: 732 TRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLC 860
V R T +A+ P +++M+ +KSL R +++ C
Sbjct: 207 DLVYTRIFGTFTNTIAQ---PYQSQRMMQREKSLNRYVMYIGC 246
>gi|302143025|emb|CBI20320.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 126 bits (315), Expect = 7e-027
Identities = 64/133 (48%), Positives = 87/133 (65%), Gaps = 9/133 (6%)
Frame = +3
Query: 153 MAMDQSFEDASGELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPV 332
MA++Q F + + + +G S K I+AS S+ N + SFDCNICLDS +PV
Sbjct: 101 MALEQDFPELAAQHESDGDVSLQK-KWKAISASEAASE---NSNGSFDCNICLDSAHDPV 156
Query: 333 VTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNSQDKD 512
VTLCGHL+CWPCI+KWLHVQ+T ++ + CPVCK+ +S ++LVPLYGRG S+ +
Sbjct: 157 VTLCGHLYCWPCIYKWLHVQSTSPVTEQ-QQNCPVCKANISHTSLVPLYGRGPSPSESET 215
Query: 513 KTC----AVPRRP 539
K A+PRRP
Sbjct: 216 KKLHVGPAIPRRP 228
>gi|255635730|gb|ACU18214.1| unknown [Glycine max]
Length = 240
Score = 124 bits (309), Expect = 4e-026
Identities = 59/100 (59%), Positives = 70/100 (70%), Gaps = 9/100 (9%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTT---DEQHQRHNKQC 431
+D D N FDCNICL+ VQ+PVVTLCGHL+CWPCI+KWLH Q+T DE+ QR QC
Sbjct: 24 ADSDRNASGDFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTSLDDEEQQR--PQC 81
Query: 432 PVCKSKVSLSTLVPLYGRGGGNSQDKDKT----CAVPRRP 539
PVCKS+VS S+LVPLYGRG K K +P+RP
Sbjct: 82 PVCKSEVSQSSLVPLYGRGQTTLPSKGKPRQVGTVIPQRP 121
>gi|255553769|ref|XP_002517925.1| rnf5, putative [Ricinus communis]
Length = 225
Score = 123 bits (307), Expect = 6e-026
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 12/136 (8%)
Frame = +3
Query: 156 AMDQSFEDASGELYGEGAFSFNNPKPDPITASLHPS--DDDTNGDSSFDCNICLDSVQEP 329
A+DQ E+ E +S N P S+ S D D + S FDCNICLD VQ+P
Sbjct: 5 AVDQYVEEG----LSESNYSRENTSPLENWKSISNSVIDSDESPSSGFDCNICLDPVQDP 60
Query: 330 VVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNSQ 503
VVTLCGHL+CWPCI+KWLH Q +T+ + + ++QCPVCK++VS TLVPL+GRG
Sbjct: 61 VVTLCGHLYCWPCIYKWLHFQSISTENEDLQLHQQCPVCKAEVSEGTLVPLFGRGQTTKP 120
Query: 504 DKDKT----CAVPRRP 539
K K +PRRP
Sbjct: 121 SKSKAPNLGIIIPRRP 136
>gi|225446337|ref|XP_002272136.1| PREDICTED: similar to ring domain containing
protein isoform 2 [Vitis vinifera]
Length = 260
Score = 122 bits (306), Expect = 8e-026
Identities = 66/133 (49%), Positives = 82/133 (61%), Gaps = 13/133 (9%)
Frame = +3
Query: 165 QSFEDA--SGELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVT 338
Q F++A +L E S N KP S + D N FDCNICLD VQ+PVVT
Sbjct: 3 QYFQEAMPQNDLNKEDGSSMENWKP----VSAADNGSDKNSYGGFDCNICLDFVQDPVVT 58
Query: 339 LCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRG----GGNS 500
LCGHLFCWPCI+KWLH Q +T+ Q+H QCPVCK++VS +TL+PLYGRG N+
Sbjct: 59 LCGHLFCWPCIYKWLHFQSISTENPDQKH-PQCPVCKAEVSDTTLIPLYGRGQATKPSNA 117
Query: 501 QDKDKTCAVPRRP 539
+ +PRRP
Sbjct: 118 KAPHPDIFIPRRP 130
>gi|224121892|ref|XP_002330679.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 122 bits (304), Expect = 1e-025
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 6/98 (6%)
Frame = +3
Query: 264 DDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPV 437
D D + S FDCNICLDSV +PVVTLCGHL+CWPCI+KWLH Q + + Q Q +QCPV
Sbjct: 36 DSDDSRSSGFDCNICLDSVHDPVVTLCGHLYCWPCIYKWLHFQSISAENQDQHPQQQCPV 95
Query: 438 CKSKVSLSTLVPLYGRGGGNSQDKDKT----CAVPRRP 539
CK++VS ST+VPL+GRG K K +PRRP
Sbjct: 96 CKAEVSQSTIVPLFGRGQTTKPCKGKAPNLGIIIPRRP 133
>gi|255638201|gb|ACU19414.1| unknown [Glycine max]
Length = 236
Score = 122 bits (304), Expect = 1e-025
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 5/98 (5%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNK-QCPV 437
+D N SFDCNICL+ VQ+PVVTLCGHL+CWPCI+KWLH Q+T ++ K QCPV
Sbjct: 24 ADSGRNASGSFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTSLDNEEQQKPQCPV 83
Query: 438 CKSKVSLSTLVPLYGRGGGNSQDKDKT----CAVPRRP 539
CKS+VS S+LVPLYGRG K K +P+RP
Sbjct: 84 CKSEVSQSSLVPLYGRGQTTIPSKGKPHQVGTVIPQRP 121
>gi|297792779|ref|XP_002864274.1| hypothetical protein ARALYDRAFT_918469
[Arabidopsis lyrata subsp. lyrata]
Length = 227
Score = 122 bits (304), Expect = 1e-025
Identities = 58/148 (39%), Positives = 89/148 (60%), Gaps = 6/148 (4%)
Frame = +3
Query: 291 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVCKSKVSLSTLV 470
FDCNICL++ +PVVTLCGHL+CWPCI++WL VQ + + CPVCKS +S+ +LV
Sbjct: 38 FDCNICLETAHDPVVTLCGHLYCWPCIYRWLDVQKSSSFSIIQQQNCPVCKSNISIGSLV 97
Query: 471 PLYGRGGGNSQDKDKTCAVPRRPVYKLEMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSS 650
PLYGRG +S + +P+R L + ++ + H ++RH G + + +
Sbjct: 98 PLYGRGMSSSSSSSELTIIPQRTASSL-----NPSLQHHHQAH-SSRHYGGFTATESSTD 151
Query: 651 NSLSYSPVVMDPMMVMVGEMVATRLFGT 734
+ + + P++ M G+MV TR+FGT
Sbjct: 152 LANAVMMSFLYPVIGMFGDMVHTRIFGT 179
>gi|224128161|ref|XP_002329096.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 121 bits (303), Expect = 2e-025
Identities = 56/121 (46%), Positives = 79/121 (65%), Gaps = 6/121 (4%)
Frame = +3
Query: 258 PSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPV 437
P+ N F+CNICLDS +PVVTLCGHL+CWPCI+KWLHV+T+ + CPV
Sbjct: 10 PTAVSDNDSGYFECNICLDSAHDPVVTLCGHLYCWPCIYKWLHVKTSSPDASQQQPSCPV 69
Query: 438 CKSKVSLSTLVPLYGRGGGNSQDKDK----TCAVPRRPV-YKLEMANSSTDVRLSQRVHF 602
CK+ +S ++LVPLYGRG S+ K K +PRRP+ +L N++T + ++++H
Sbjct: 70 CKADISPNSLVPLYGRGPSTSESKSKKDPADVVIPRRPLPSELNTVNANTSPQ-NRQLHS 128
Query: 603 N 605
N
Sbjct: 129 N 129
>gi|224127182|ref|XP_002329420.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 121 bits (302), Expect = 2e-025
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 10/110 (9%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQ--TTD 401
KP P TA D D + + FDCNICLDSVQ+PVVTLCGHL+CWPCI+KWLH Q + +
Sbjct: 28 KPIPKTA----IDSDESPSNGFDCNICLDSVQDPVVTLCGHLYCWPCIYKWLHSQSISAE 83
Query: 402 EQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKT----CAVPRRP 539
Q Q+ +QCPVCK++VS ST+VPL+GRG K +P RP
Sbjct: 84 NQDQQPQQQCPVCKAEVSQSTIVPLFGRGQTTKPSMRKAPNVGIIIPHRP 133
>gi|225461411|ref|XP_002282248.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 253
Score = 121 bits (302), Expect = 2e-025
Identities = 62/129 (48%), Positives = 83/129 (64%), Gaps = 9/129 (6%)
Frame = +3
Query: 165 QSFEDASGELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLC 344
Q F + + + +G S K I+AS S+ N + SFDCNICLDS +PVVTLC
Sbjct: 5 QDFPELAAQHESDGDVSLQK-KWKAISASEAASE---NSNGSFDCNICLDSAHDPVVTLC 60
Query: 345 GHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKTC- 521
GHL+CWPCI+KWLHVQ+T ++ + CPVCK+ +S ++LVPLYGRG S+ + K
Sbjct: 61 GHLYCWPCIYKWLHVQSTSPVTEQ-QQNCPVCKANISHTSLVPLYGRGPSPSESETKKLH 119
Query: 522 ---AVPRRP 539
A+PRRP
Sbjct: 120 VGPAIPRRP 128
>gi|224114956|ref|XP_002316902.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 116 bits (289), Expect = 7e-024
Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
Frame = +3
Query: 258 PSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPV 437
P+ N F+CNICLDS +PVVT CGHL+CWPC++KWLHV+T+ + CPV
Sbjct: 10 PAAVSDNDSDLFECNICLDSAHDPVVTFCGHLYCWPCMYKWLHVKTSSPDAVQQQPSCPV 69
Query: 438 CKSKVSLSTLVPLYGRGGGNSQDKDK----TCAVPRRPVYKLEMANSSTDVRLSQRVHFN 605
CK+ +S ++LVPLYGRG +S+ K A+PRRP+ S R S++ H N
Sbjct: 70 CKAAISPTSLVPLYGRGPPSSESKSMGSSVDAALPRRPLPSGLNTVSPNTSRQSRQPHSN 129
Query: 606 N 608
+
Sbjct: 130 S 130
>gi|297850320|ref|XP_002893041.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 226
Score = 110 bits (274), Expect = 4e-022
Identities = 47/96 (48%), Positives = 66/96 (68%), Gaps = 10/96 (10%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
+D ++N S+F+CNICLD Q+P+VTLCGHLFCWPC++KWLH+ + +K+CPVC
Sbjct: 11 NDTNSNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHS-------QSKECPVC 63
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDKT---CAVPRRP 539
K+ + LVPLYGRG ++ + K+ VP RP
Sbjct: 64 KAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRP 99
>gi|18394721|ref|NP_564078.1| RING/U-box domain-containing protein [Arabidopsis
thaliana]
Length = 226
Score = 109 bits (271), Expect = 9e-022
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
+D + N S+F+CNICLD Q+P+VTLCGHLFCWPC++KWLH+ + +K CPVC
Sbjct: 11 NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHS-------QSKDCPVC 63
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDKT---CAVPRRP 539
K+ + LVPLYGRG ++ + K+ VP RP
Sbjct: 64 KAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRP 99
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,159,296,754,985
Number of Sequences: 15229318
Number of Extensions: 5159296754985
Number of Successful Extensions: 1204912839
Number of sequences better than 0.0: 0
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