BLASTX 7.6.2
Query= UN47959 /QuerySize=997
(996 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O64425|RMA1_ARATH E3 ubiquitin-protein ligase RMA1 OS=Arabido... 362 3e-099
sp|Q8GUK7|RMA3_ARATH E3 ubiquitin-protein ligase RMA3 OS=Arabido... 153 2e-036
sp|P93030|RMA2_ARATH E3 ubiquitin-protein ligase RMA2 OS=Arabido... 117 1e-025
sp|Q6R567|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1 OS=Capsi... 112 5e-024
sp|Q5ZIR9|RN185_CHICK RING finger protein 185 OS=Gallus gallus G... 104 1e-021
sp|Q96GF1|RN185_HUMAN RING finger protein 185 OS=Homo sapiens GN... 98 9e-020
sp|Q91YT2|RN185_MOUSE RING finger protein 185 OS=Mus musculus GN... 98 9e-020
sp|Q5RFK9|RN185_PONAB RING finger protein 185 OS=Pongo abelii GN... 98 9e-020
sp|Q568Y3|RN185_RAT RING finger protein 185 OS=Rattus norvegicus... 98 9e-020
sp|Q6PC78|RN185_DANRE RING finger protein 185 OS=Danio rerio GN=... 97 2e-019
sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis ele... 96 4e-019
sp|Q99942|RNF5_HUMAN E3 ubiquitin-protein ligase RNF5 OS=Homo sa... 91 9e-018
sp|O35445|RNF5_MOUSE E3 ubiquitin-protein ligase RNF5 OS=Mus mus... 91 9e-018
sp|Q5M807|RNF5_RAT E3 ubiquitin-protein ligase RNF5 OS=Rattus no... 91 9e-018
sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus m... 52 6e-006
>sp|O64425|RMA1_ARATH E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana
GN=RMA1 PE=1 SV=1
Length = 249
Score = 362 bits (928), Expect = 3e-099
Identities = 189/255 (74%), Positives = 215/255 (84%), Gaps = 16/255 (6%)
Frame = +3
Query: 153 MAMDQSFEDAS--GELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQE 326
MA+DQSFEDA+ GELYGEGAF F + KP+PIT S+ PSDD DS+FDCNICLDSVQE
Sbjct: 1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSV-PSDD--TDDSNFDCNICLDSVQE 57
Query: 327 PVVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNS 500
PVVTLCGHLFCWPCIHKWL VQ +T +++QRH +QCPVCKSKVS STLVPLYGRG +
Sbjct: 58 PVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH-RQCPVCKSKVSHSTLVPLYGRGRCTT 116
Query: 501 QDKDKTCAVPRR---PVYKLEMANS---STDVRLSQRVHFNNRHDGYYPVSGVMSSNSLS 662
Q++ K +VP+R PVY+LEM NS STD+RLSQRVHFN+ +GYYPVSGVMSSNSLS
Sbjct: 117 QEEGKN-SVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLS 175
Query: 663 YSPVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRI 842
YS V+DP+MVMVGEMVATRLFGTRVMDRF YPDTYNLA TS PRMRR+IM+ADKSLGRI
Sbjct: 176 YS-AVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRI 234
Query: 843 FLFLLCCVALCLVLF 887
F F +CCV LCL+LF
Sbjct: 235 FFFFMCCVVLCLLLF 249
>sp|Q8GUK7|RMA3_ARATH E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana
GN=RMA3 PE=1 SV=1
Length = 243
Score = 153 bits (386), Expect = 2e-036
Identities = 89/232 (38%), Positives = 124/232 (53%), Gaps = 24/232 (10%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ 407
KP+ TA P+ N FDCNICLD+ +PVVTLCGHLFCWPCI+KWLHVQ +
Sbjct: 24 KPNLTTA---PTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVS 80
Query: 408 HQRHNKQCPVCKSKVSLSTLVPLYGRG--------GGNSQDKDKTCAVPRRP----VYKL 551
+H CPVCKS +++++LVPLYGRG G QD T +PRRP +
Sbjct: 81 VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALST-DIPRRPAPSALRNP 139
Query: 552 EMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYSPVVMDPMMVMVGEMVATRLFG 731
+ SS + L + + H+ Y G ++ S + VM + V +FG
Sbjct: 140 ITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPV-----IGMFG 194
Query: 732 TRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF 887
V R T +A+ P +++M+ +KSL R+ +F LCC+ LCL+LF
Sbjct: 195 DLVYTRIFGTFTNTIAQ---PYQSQRMMQREKSLNRVSIFFLCCIILCLLLF 243
>sp|P93030|RMA2_ARATH E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana
GN=RMA2 PE=1 SV=1
Length = 193
Score = 117 bits (293), Expect = 1e-025
Identities = 64/135 (47%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Frame = +3
Query: 264 DDDTNGDS--SFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ------HQRH 419
DD T DS FDCNICLD V++PVVTLCGHLFCWPCIHKW + Q H+R
Sbjct: 8 DDTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKRE 67
Query: 420 NKQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKTCAVPRRPVYKLEMANSSTDVRLSQRVH 599
+CPVCKS VS +TLVP+YGRG Q + P PVY L SQR
Sbjct: 68 PPKCPVCKSDVSEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 127
Query: 600 FNNRHDGYYPVSGVM 644
+ PV GV+
Sbjct: 128 YRMPD----PVMGVV 138
>sp|Q6R567|RMA1_CAPAN E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum
GN=RMA1H1 PE=1 SV=1
Length = 252
Score = 112 bits (279), Expect = 5e-024
Identities = 48/96 (50%), Positives = 66/96 (68%), Gaps = 6/96 (6%)
Frame = +3
Query: 270 DTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQT-TDEQHQRHNKQCPVCKS 446
+ N FDCNICLD V EPV+TLCGHL+CWPCI+KW++ Q+ + E + QCPVCK+
Sbjct: 32 EENISGGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKA 91
Query: 447 KVSLSTLVPLYGRGGGNSQDKDKTC-----AVPRRP 539
+VS TL+PLYGRGG +++ + +P+RP
Sbjct: 92 EVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRP 127
Score = 80 bits (197), Expect = 2e-014
Identities = 48/123 (39%), Positives = 65/123 (52%), Gaps = 3/123 (2%)
Frame = +3
Query: 528 PRRPVYKLEMANSSTDVRLSQRVHFNNRHDGYYPV--SGVMSSNSLSYSPVVMDPMM-VM 698
PR + L S +L QR + + P MSS LS + + M
Sbjct: 130 PRCGGHFLLPTTDSNPSQLLQRRGYQQQSQTRQPAYQGSYMSSPMLSPGGATANMLQHSM 189
Query: 699 VGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCL 878
+GE+ R+FG +TYP++YNLA +S PRMRRQ+ +AD+SLGRI FL CC CL
Sbjct: 190 IGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQADRSLGRICFFLFCCFVTCL 249
Query: 879 VLF 887
+LF
Sbjct: 250 ILF 252
>sp|Q5ZIR9|RN185_CHICK RING finger protein 185 OS=Gallus gallus GN=RNF185 PE=2
SV=1
Length = 194
Score = 104 bits (258), Expect = 1e-021
Identities = 48/101 (47%), Positives = 70/101 (69%), Gaps = 13/101 (12%)
Frame = +3
Query: 243 TASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHN 422
++S + + D+TN D++F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N
Sbjct: 23 SSSSNGAGDNTNQDNTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET--------RPN 74
Query: 423 KQ-CPVCKSKVSLSTLVPLYGRGGGNSQD-KDKTCAVPRRP 539
+Q CPVCK+ +S ++PLYGRG QD ++KT P RP
Sbjct: 75 RQVCPVCKAGISRDKVIPLYGRGSTGQQDPREKT---PPRP 112
>sp|Q96GF1|RN185_HUMAN RING finger protein 185 OS=Homo sapiens GN=RNF185 PE=2
SV=1
Length = 192
Score = 98 bits (242), Expect = 9e-020
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 13/88 (14%)
Frame = +3
Query: 282 DSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQ-CPVCKSKVSL 458
DS+F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N+Q CPVCK+ +S
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET--------RPNRQVCPVCKAGISR 85
Query: 459 STLVPLYGRGGGNSQD-KDKTCAVPRRP 539
++PLYGRG QD ++KT P RP
Sbjct: 86 DKVIPLYGRGSTGQQDPREKT---PPRP 110
>sp|Q91YT2|RN185_MOUSE RING finger protein 185 OS=Mus musculus GN=Rnf185 PE=2
SV=1
Length = 192
Score = 98 bits (242), Expect = 9e-020
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 13/88 (14%)
Frame = +3
Query: 282 DSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQ-CPVCKSKVSL 458
DS+F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N+Q CPVCK+ +S
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET--------RPNRQVCPVCKAGISR 85
Query: 459 STLVPLYGRGGGNSQD-KDKTCAVPRRP 539
++PLYGRG QD ++KT P RP
Sbjct: 86 DKVIPLYGRGSTGQQDPREKT---PPRP 110
>sp|Q5RFK9|RN185_PONAB RING finger protein 185 OS=Pongo abelii GN=RNF185 PE=2
SV=1
Length = 192
Score = 98 bits (242), Expect = 9e-020
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 13/88 (14%)
Frame = +3
Query: 282 DSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQ-CPVCKSKVSL 458
DS+F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N+Q CPVCK+ +S
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET--------RPNRQVCPVCKAGISR 85
Query: 459 STLVPLYGRGGGNSQD-KDKTCAVPRRP 539
++PLYGRG QD ++KT P RP
Sbjct: 86 DKVIPLYGRGSTGQQDPREKT---PPRP 110
>sp|Q568Y3|RN185_RAT RING finger protein 185 OS=Rattus norvegicus GN=Rnf185 PE=2
SV=1
Length = 192
Score = 98 bits (242), Expect = 9e-020
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 13/88 (14%)
Frame = +3
Query: 282 DSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQ-CPVCKSKVSL 458
DS+F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N+Q CPVCK+ +S
Sbjct: 34 DSTFECNICLDTAKDAVISLCGHLFCWPCLHQWLET--------RPNRQVCPVCKAGISR 85
Query: 459 STLVPLYGRGGGNSQD-KDKTCAVPRRP 539
++PLYGRG QD ++KT P RP
Sbjct: 86 DKVIPLYGRGSTGQQDPREKT---PPRP 110
>sp|Q6PC78|RN185_DANRE RING finger protein 185 OS=Danio rerio GN=rnf185 PE=2
SV=1
Length = 194
Score = 97 bits (240), Expect = 2e-019
Identities = 45/88 (51%), Positives = 61/88 (69%), Gaps = 13/88 (14%)
Frame = +3
Query: 282 DSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQ-CPVCKSKVSL 458
DS+F+CNICLD+ ++ V++LCGHLFCWPC+H+WL R N+Q CPVCK+ +S
Sbjct: 36 DSTFECNICLDTSKDAVISLCGHLFCWPCLHQWLET--------RPNRQVCPVCKAGISR 87
Query: 459 STLVPLYGRGGGNSQD-KDKTCAVPRRP 539
++PLYGRG QD ++KT P RP
Sbjct: 88 DKVIPLYGRGSTGQQDPREKT---PPRP 112
>sp|Q09463|RNF5_CAEEL RING finger protein 5 OS=Caenorhabditis elegans GN=rnf-5
PE=1 SV=1
Length = 235
Score = 96 bits (237), Expect = 4e-019
Identities = 47/99 (47%), Positives = 65/99 (65%), Gaps = 15/99 (15%)
Frame = +3
Query: 258 PSDDDT---NGDSS--FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHN 422
PS++ T N D S F+CNICLD+ ++ VV+LCGHLFCWPC+ +WL + +N
Sbjct: 8 PSEEPTSSSNKDESARFECNICLDAAKDAVVSLCGHLFCWPCLSQWLDTRP-------NN 60
Query: 423 KQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKTCAVPRRP 539
+ CPVCKS + + +VP+YGRGG +S + K VP RP
Sbjct: 61 QVCPVCKSAIDGNKVVPIYGRGGDSSDPRKK---VPPRP 96
>sp|Q99942|RNF5_HUMAN E3 ubiquitin-protein ligase RNF5 OS=Homo sapiens GN=RNF5
PE=1 SV=1
Length = 180
Score = 91 bits (225), Expect = 9e-018
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +3
Query: 258 PSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPV 437
P+ + ++F+CNICL++ +E VV++CGHL+CWPC+H+WL + ++CPV
Sbjct: 14 PNRERGGAGATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------ERQECPV 66
Query: 438 CKSKVSLSTLVPLYGRGGGNSQD 506
CK+ +S +VPLYGRG QD
Sbjct: 67 CKAGISREKVVPLYGRGSQKPQD 89
>sp|O35445|RNF5_MOUSE E3 ubiquitin-protein ligase RNF5 OS=Mus musculus GN=Rnf5
PE=1 SV=1
Length = 180
Score = 91 bits (225), Expect = 9e-018
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +3
Query: 258 PSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPV 437
P+ + ++F+CNICL++ +E VV++CGHL+CWPC+H+WL + ++CPV
Sbjct: 14 PNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------DRQECPV 66
Query: 438 CKSKVSLSTLVPLYGRGGGNSQD 506
CK+ +S +VPLYGRG QD
Sbjct: 67 CKAGISREKVVPLYGRGSQKPQD 89
>sp|Q5M807|RNF5_RAT E3 ubiquitin-protein ligase RNF5 OS=Rattus norvegicus
GN=Rnf5 PE=2 SV=1
Length = 180
Score = 91 bits (225), Expect = 9e-018
Identities = 36/83 (43%), Positives = 55/83 (66%), Gaps = 7/83 (8%)
Frame = +3
Query: 258 PSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPV 437
P+ + ++F+CNICL++ +E VV++CGHL+CWPC+H+WL + ++CPV
Sbjct: 14 PNRERGGASATFECNICLETAREAVVSVCGHLYCWPCLHQWLETRP-------DRQECPV 66
Query: 438 CKSKVSLSTLVPLYGRGGGNSQD 506
CK+ +S +VPLYGRG QD
Sbjct: 67 CKAGISREKVVPLYGRGSQKPQD 89
>sp|Q6PCN7|HLTF_MOUSE Helicase-like transcription factor OS=Mus musculus GN=Hltf
PE=1 SV=1
Length = 1003
Score = 52 bits (123), Expect = 6e-006
Identities = 24/56 (42%), Positives = 35/56 (62%), Gaps = 7/56 (12%)
Frame = +3
Query: 285 SSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVCKSKV 452
S +C ICLDS+ PV+T C H+FC PCI + +H Q H K CP+C++++
Sbjct: 750 SDEECAICLDSLTFPVITHCAHVFCKPCICQVIH------SEQPHAK-CPLCRNEI 798
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 179,029,612,548
Number of Sequences: 518415
Number of Extensions: 179029612548
Number of Successful Extensions: 1096623871
Number of sequences better than 0.0: 0
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