BLASTX 7.6.2
Query= UN47959 /QuerySize=997
(996 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G03510.1 | Symbols: RMA1 | RMA1; protein bindi... 362 2e-100
TAIR9_protein||AT4G03510.2 | Symbols: RMA1 | RMA1; protein bindi... 362 2e-100
TAIR9_protein||AT4G27470.1 | Symbols: | zinc finger (C3HC4-type... 154 1e-037
TAIR9_protein||AT4G28270.1 | Symbols: | zinc finger (C3HC4-type... 117 1e-026
TAIR9_protein||AT1G19310.1 | Symbols: | zinc finger (C3HC4-type... 109 4e-024
TAIR9_protein||AT2G23780.1 | Symbols: | zinc finger (C3HC4-type... 106 4e-023
TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type... 103 2e-022
TAIR9_protein||AT2G44410.1 | Symbols: | protein binding / zinc ... 72 5e-013
TAIR9_protein||AT3G58030.1 | Symbols: | zinc finger (C3HC4-type... 66 3e-011
TAIR9_protein||AT3G58030.2 | Symbols: | zinc finger (C3HC4-type... 66 3e-011
TAIR9_protein||AT3G58030.3 | Symbols: | zinc finger (C3HC4-type... 66 3e-011
TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type... 62 7e-010
>TAIR9_protein||AT4G03510.1 | Symbols: RMA1 | RMA1; protein binding /
ubiquitin-protein ligase/ zinc ion binding | chr4:1557905-1558654
REVERSE
Length = 250
Score = 362 bits (929), Expect = 2e-100
Identities = 189/256 (73%), Positives = 215/256 (83%), Gaps = 16/256 (6%)
Frame = +3
Query: 153 MAMDQSFEDAS--GELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQE 326
MA+DQSFEDA+ GELYGEGAF F + KP+PIT S+ PSDD DS+FDCNICLDSVQE
Sbjct: 1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSV-PSDD--TDDSNFDCNICLDSVQE 57
Query: 327 PVVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNS 500
PVVTLCGHLFCWPCIHKWL VQ +T +++QRH +QCPVCKSKVS STLVPLYGRG +
Sbjct: 58 PVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH-RQCPVCKSKVSHSTLVPLYGRGRCTT 116
Query: 501 QDKDKTCAVPRR---PVYKLEMANS---STDVRLSQRVHFNNRHDGYYPVSGVMSSNSLS 662
Q++ K +VP+R PVY+LEM NS STD+RLSQRVHFN+ +GYYPVSGVMSSNSLS
Sbjct: 117 QEEGKN-SVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLS 175
Query: 663 YSPVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRI 842
YS V+DP+MVMVGEMVATRLFGTRVMDRF YPDTYNLA TS PRMRR+IM+ADKSLGRI
Sbjct: 176 YS-AVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRI 234
Query: 843 FLFLLCCVALCLVLF* 890
F F +CCV LCL+LF*
Sbjct: 235 FFFFMCCVVLCLLLF* 250
>TAIR9_protein||AT4G03510.2 | Symbols: RMA1 | RMA1; protein binding /
ubiquitin-protein ligase/ zinc ion binding | chr4:1557905-1558654
REVERSE
Length = 250
Score = 362 bits (929), Expect = 2e-100
Identities = 189/256 (73%), Positives = 215/256 (83%), Gaps = 16/256 (6%)
Frame = +3
Query: 153 MAMDQSFEDAS--GELYGEGAFSFNNPKPDPITASLHPSDDDTNGDSSFDCNICLDSVQE 326
MA+DQSFEDA+ GELYGEGAF F + KP+PIT S+ PSDD DS+FDCNICLDSVQE
Sbjct: 1 MALDQSFEDAALLGELYGEGAFCFKSKKPEPITVSV-PSDD--TDDSNFDCNICLDSVQE 57
Query: 327 PVVTLCGHLFCWPCIHKWLHVQ--TTDEQHQRHNKQCPVCKSKVSLSTLVPLYGRGGGNS 500
PVVTLCGHLFCWPCIHKWL VQ +T +++QRH +QCPVCKSKVS STLVPLYGRG +
Sbjct: 58 PVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRH-RQCPVCKSKVSHSTLVPLYGRGRCTT 116
Query: 501 QDKDKTCAVPRR---PVYKLEMANS---STDVRLSQRVHFNNRHDGYYPVSGVMSSNSLS 662
Q++ K +VP+R PVY+LEM NS STD+RLSQRVHFN+ +GYYPVSGVMSSNSLS
Sbjct: 117 QEEGKN-SVPKRPVGPVYRLEMPNSPYASTDLRLSQRVHFNSPQEGYYPVSGVMSSNSLS 175
Query: 663 YSPVVMDPMMVMVGEMVATRLFGTRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRI 842
YS V+DP+MVMVGEMVATRLFGTRVMDRF YPDTYNLA TS PRMRR+IM+ADKSLGRI
Sbjct: 176 YS-AVLDPVMVMVGEMVATRLFGTRVMDRFAYPDTYNLAGTSGPRMRRRIMQADKSLGRI 234
Query: 843 FLFLLCCVALCLVLF* 890
F F +CCV LCL+LF*
Sbjct: 235 FFFFMCCVVLCLLLF* 250
>TAIR9_protein||AT4G27470.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:13735576-13736307 FORWARD
Length = 244
Score = 154 bits (387), Expect = 1e-037
Identities = 89/233 (38%), Positives = 124/233 (53%), Gaps = 24/233 (10%)
Frame = +3
Query: 228 KPDPITASLHPSDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ 407
KP+ TA P+ N FDCNICLD+ +PVVTLCGHLFCWPCI+KWLHVQ +
Sbjct: 24 KPNLTTA---PTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHVQLSSVS 80
Query: 408 HQRHNKQCPVCKSKVSLSTLVPLYGRG--------GGNSQDKDKTCAVPRRP----VYKL 551
+H CPVCKS +++++LVPLYGRG G QD T +PRRP +
Sbjct: 81 VDQHQNNCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALST-DIPRRPAPSALRNP 139
Query: 552 EMANSSTDVRLSQRVHFNNRHDGYYPVSGVMSSNSLSYSPVVMDPMMVMVGEMVATRLFG 731
+ SS + L + + H+ Y G ++ S + VM + V +FG
Sbjct: 140 ITSASSLNPSLQHQTLSPSFHNHQYSPRGFTTTESTDLANAVMMSFLYPV-----IGMFG 194
Query: 732 TRVMDRFTYPDTYNLAETSCPRMRRQIMKADKSLGRIFLFLLCCVALCLVLF* 890
V R T +A+ P +++M+ +KSL R+ +F LCC+ LCL+LF*
Sbjct: 195 DLVYTRIFGTFTNTIAQ---PYQSQRMMQREKSLNRVSIFFLCCIILCLLLF* 244
>TAIR9_protein||AT4G28270.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr4:14007614-14008195 REVERSE
Length = 194
Score = 117 bits (293), Expect = 1e-026
Identities = 64/135 (47%), Positives = 74/135 (54%), Gaps = 12/135 (8%)
Frame = +3
Query: 264 DDDTNGDS--SFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQ------HQRH 419
DD T DS FDCNICLD V++PVVTLCGHLFCWPCIHKW + Q H+R
Sbjct: 8 DDTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKRE 67
Query: 420 NKQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKTCAVPRRPVYKLEMANSSTDVRLSQRVH 599
+CPVCKS VS +TLVP+YGRG Q + P PVY L SQR
Sbjct: 68 PPKCPVCKSDVSEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGESQRYM 127
Query: 600 FNNRHDGYYPVSGVM 644
+ PV GV+
Sbjct: 128 YRMPD----PVMGVV 138
>TAIR9_protein||AT1G19310.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:6676424-6677104 REVERSE
Length = 227
Score = 109 bits (271), Expect = 4e-024
Identities = 47/96 (48%), Positives = 64/96 (66%), Gaps = 10/96 (10%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
+D + N S+F+CNICLD Q+P+VTLCGHLFCWPC++KWLH+ + +K CPVC
Sbjct: 11 NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHS-------QSKDCPVC 63
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDKT---CAVPRRP 539
K+ + LVPLYGRG ++ + K+ VP RP
Sbjct: 64 KAVIEEDRLVPLYGRGKSSADPRSKSIPGLEVPNRP 99
>TAIR9_protein||AT2G23780.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:10123551-10124234 REVERSE
Length = 228
Score = 106 bits (262), Expect = 4e-023
Identities = 47/103 (45%), Positives = 64/103 (62%), Gaps = 11/103 (10%)
Frame = +3
Query: 243 TASLHPSDDDTNGD-SSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRH 419
+ S S++DTN F+CNIC + Q+P+VTLCGHLFCWPC+++WLH H H
Sbjct: 9 STSYSDSNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLH-------HHSH 61
Query: 420 NKQCPVCKSKVSLSTLVPLYGRGGGNSQDKDKT---CAVPRRP 539
+++CPVCK+ V LVPLYGRG + + K +P RP
Sbjct: 62 SQECPVCKAVVQDDKLVPLYGRGKNQTDPRSKRYPGLRIPNRP 104
>TAIR9_protein||AT1G74990.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:28159837-28160250 REVERSE
Length = 138
Score = 103 bits (256), Expect = 2e-022
Identities = 52/124 (41%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Frame = +3
Query: 261 SDDDTNGDSSFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVC 440
++++ + ++F CNICL+ +EP+VTLCGHLFCWPC++KWLH H + N CPVC
Sbjct: 7 TNEEDDASNNFGCNICLELAREPIVTLCGHLFCWPCLYKWLH------YHSKSN-HCPVC 59
Query: 441 KSKVSLSTLVPLYGRGGGNSQDKDKT---CAVPRRPVYKLEMANSSTDVRLSQRVHFNNR 611
K+ V TLVPLYG G +S + K VP RP + RL QR H ++
Sbjct: 60 KALVKEDTLVPLYGMGKPSSDPRSKLNSGVTVPNRPA---ATRTETARPRLEQRHHGSSF 116
Query: 612 HDGY 623
G+
Sbjct: 117 FGGH 120
>TAIR9_protein||AT2G44410.1 | Symbols: | protein binding / zinc ion binding |
chr2:18328873-18330114 FORWARD
Length = 414
Score = 72 bits (175), Expect = 5e-013
Identities = 32/87 (36%), Positives = 52/87 (59%), Gaps = 11/87 (12%)
Frame = +3
Query: 291 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDEQHQRHNKQCPVCKSKVSLSTLV 470
FDCNICL+ ++P++T CGHLFCW C ++ + + K+CPVC +V+ + ++
Sbjct: 123 FDCNICLEKAEDPILTCCGHLFCWGCFYQLPLIYL-------NIKECPVCDGEVTDAEVI 175
Query: 471 PLYGRG----GGNSQDKDKTCAVPRRP 539
P+YG G G + +D ++P RP
Sbjct: 176 PIYGNGDDCDGTKPKLEDCGISLPPRP 202
>TAIR9_protein||AT3G58030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 66 bits (160), Expect = 3e-011
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 291 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDE 404
FDCNICLD +EPV+T CGHL+CWPC+++WL + E
Sbjct: 137 FDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE 174
>TAIR9_protein||AT3G58030.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 66 bits (160), Expect = 3e-011
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 291 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDE 404
FDCNICLD +EPV+T CGHL+CWPC+++WL + E
Sbjct: 137 FDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE 174
>TAIR9_protein||AT3G58030.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:21485527-21486837 FORWARD
Length = 437
Score = 66 bits (160), Expect = 3e-011
Identities = 23/38 (60%), Positives = 30/38 (78%)
Frame = +3
Query: 291 FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDE 404
FDCNICLD +EPV+T CGHL+CWPC+++WL + E
Sbjct: 137 FDCNICLDLSKEPVLTCCGHLYCWPCLYQWLQISDAKE 174
>TAIR9_protein||AT2G42030.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:17539069-17540346 REVERSE
Length = 426
Score = 62 bits (148), Expect = 7e-010
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Frame = +3
Query: 234 DPITASLHPSDDDTNGDSS-FDCNICLDSVQEPVVTLCGHLFCWPCIHKWLHVQTTDE 404
D +T + D S FDC ICLD ++PVVT CGHL+CW C+++WL V E
Sbjct: 119 DNVTEEKRDVEKSVGSDGSFFDCYICLDLSKDPVVTNCGHLYCWSCLYQWLQVSEAKE 176
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0
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