BLASTX 7.6.2
Query= UN47980 /QuerySize=930
(929 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21790.1 | Symbols: | FUNCTIONS IN: molecular... 192 4e-049
>TAIR9_protein||AT1G21790.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
(InterPro:IPR006634); Has 127 Blast hits to 127 proteins in 26 species:
Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 41; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:7654357-7655691
FORWARD
Length = 289
Score = 192 bits (486), Expect = 4e-049
Identities = 95/127 (74%), Positives = 104/127 (81%), Gaps = 7/127 (5%)
Frame = +1
Query: 328 RSYTQSSPPPQVSLPLSLSLLYSD*R*FCIGCVVVFILLNQCLEKGVDEMFDHSELVGGA 507
RS+ P + + S+SLL+S VVFILLNQCL KG+DEMFDHSELVGG
Sbjct: 61 RSWISRDP---IFVNTSVSLLHS----IITSASVVFILLNQCLAKGLDEMFDHSELVGGT 113
Query: 508 WNWAHPALCFSCGYFAYDQWDMLRYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI 687
W WA+PALCFSCGYFAYDQWDML+YRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI
Sbjct: 114 WKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI 173
Query: 688 LTLICEV 708
LTLICE+
Sbjct: 174 LTLICEM 180
Score = 139 bits (348), Expect = 4e-033
Identities = 71/86 (82%), Positives = 74/86 (86%), Gaps = 5/86 (5%)
Frame = +3
Query: 117 MARTGTG-----KNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVISGGCFFQSANWFV 281
MAR G G KNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVI GGCFFQ NW V
Sbjct: 1 MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVV 60
Query: 282 RACLSRDPLFVNTSVSLLHSIITSAS 359
R+ +SRDP+FVNTSVSLLHSIITSAS
Sbjct: 61 RSWISRDPIFVNTSVSLLHSIITSAS 86
Score = 103 bits (256), Expect = 2e-022
Identities = 48/52 (92%), Positives = 50/52 (96%)
Frame = +2
Query: 773 QMHSIFLHVRKLRRMAGIRDSGTALVKLEWVLNWAAFVFARCIPHILITVKL 928
+MHSIFLHVRKLRRMAGIRDS TALVKLEWVLNW AFVFARCIPHILIT+KL
Sbjct: 179 EMHSIFLHVRKLRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKL 230
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0
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