Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN47980


BLASTX 7.6.2

Query= UN47980 /QuerySize=930
        (929 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G21790.1 | Symbols:  | FUNCTIONS IN: molecular...    192   4e-049

>TAIR9_protein||AT1G21790.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; INVOLVED IN: biological_process unknown; LOCATED IN: integral
        to membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
        growth stages; CONTAINS InterPro DOMAIN/s: TRAM, LAG1 and CLN8 homology
        (InterPro:IPR006634); Has 127 Blast hits to 127 proteins in 26 species:
        Archae - 0; Bacteria - 0; Metazoa - 84; Fungi - 0; Plants - 41; Viruses
        - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:7654357-7655691
        FORWARD

          Length = 289

 Score =  192 bits (486), Expect = 4e-049
 Identities = 95/127 (74%), Positives = 104/127 (81%), Gaps = 7/127 (5%)
 Frame = +1

Query: 328 RSYTQSSPPPQVSLPLSLSLLYSD*R*FCIGCVVVFILLNQCLEKGVDEMFDHSELVGGA 507
           RS+    P   + +  S+SLL+S          VVFILLNQCL KG+DEMFDHSELVGG 
Sbjct:  61 RSWISRDP---IFVNTSVSLLHS----IITSASVVFILLNQCLAKGLDEMFDHSELVGGT 113

Query: 508 WNWAHPALCFSCGYFAYDQWDMLRYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI 687
           W WA+PALCFSCGYFAYDQWDML+YRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI
Sbjct: 114 WKWAYPALCFSCGYFAYDQWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLI 173

Query: 688 LTLICEV 708
           LTLICE+
Sbjct: 174 LTLICEM 180


 Score =  139 bits (348), Expect = 4e-033
 Identities = 71/86 (82%), Positives = 74/86 (86%), Gaps = 5/86 (5%)
 Frame = +3

Query: 117 MARTGTG-----KNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVISGGCFFQSANWFV 281
           MAR G G     KNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVI GGCFFQ  NW V
Sbjct:   1 MARNGIGSSGGKKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVV 60

Query: 282 RACLSRDPLFVNTSVSLLHSIITSAS 359
           R+ +SRDP+FVNTSVSLLHSIITSAS
Sbjct:  61 RSWISRDPIFVNTSVSLLHSIITSAS 86


 Score =  103 bits (256), Expect = 2e-022
 Identities = 48/52 (92%), Positives = 50/52 (96%)
 Frame = +2

Query: 773 QMHSIFLHVRKLRRMAGIRDSGTALVKLEWVLNWAAFVFARCIPHILITVKL 928
           +MHSIFLHVRKLRRMAGIRDS TALVKLEWVLNW AFVFARCIPHILIT+KL
Sbjct: 179 EMHSIFLHVRKLRRMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKL 230

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0