Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN47987


BLASTX 7.6.2

Query= UN47987 /QuerySize=843
        (842 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G19190.1 | Symbols:  | unknown protein | chr5:...    161   6e-040
TAIR9_protein||AT3G06070.1 | Symbols:  | unknown protein | chr3:...     89   3e-018

>TAIR9_protein||AT5G19190.1 | Symbols:  | unknown protein | chr5:6457349-6457918
        FORWARD

          Length = 155

 Score =  161 bits (406), Expect = 6e-040
 Identities = 84/123 (68%), Positives = 98/123 (79%), Gaps = 6/123 (4%)
 Frame = +1

Query: 238 PLSNCLFLESLWKQGMFRGSYQTAPYMYHKEPSKGTGVFIPKSSQSRRRP-HHPKQGRFS 414
           P+S      SL  QG+FRG YQTAPYMY +E SKGTGVFIPKSSQ RRRP HH KQGR+S
Sbjct:  33 PVSLSSSSSSLSFQGLFRGGYQTAPYMYQQEQSKGTGVFIPKSSQPRRRPHHHQKQGRYS 92

Query: 415 SFNAKQHNPLHQNRQQYQ---DNSRCTLTTH--SNNKSSMITNNVHASIPKRTYRDAASI 579
           SFNAKQ + LHQNRQ+YQ   +NSR TLTTH  +NNKS+M + +VHASIP+R+YRDA+SI
Sbjct:  93 SFNAKQQHSLHQNRQEYQQNHENSRSTLTTHNNNNNKSNMNSTSVHASIPRRSYRDASSI 152

Query: 580 YT* 588
           YT*
Sbjct: 153 YT* 155


 Score =  73 bits (177), Expect = 2e-013
 Identities = 40/46 (86%), Positives = 42/46 (91%), Gaps = 2/46 (4%)
 Frame = +3

Query:  60 MAMELELDDDVFFADISKQISLLIMDEDEQLNHVSL--STSSLAFQ 191
           MAMELELDDDVFFADISKQISLLIMDEDE LN VSL  S+SSL+FQ
Sbjct:   1 MAMELELDDDVFFADISKQISLLIMDEDEHLNPVSLSSSSSSLSFQ 46

>TAIR9_protein||AT3G06070.1 | Symbols:  | unknown protein | chr3:1831305-1831846
        REVERSE

          Length = 152

 Score =  89 bits (219), Expect = 3e-018
 Identities = 58/119 (48%), Positives = 73/119 (61%), Gaps = 23/119 (19%)
 Frame = +1

Query: 277 QGMFRGSYQTA--PYMYHKE--------PSKGTGVFIPKSSQSRRR----PHHPKQGRF- 411
           QG+FRG+YQT+  PYM + E         SKGTGVFIP+SSQ RR+    PH  KQGRF 
Sbjct:  42 QGLFRGNYQTSATPYMMYNEQINYNVIRESKGTGVFIPRSSQPRRKHNHHPHQKKQGRFI 101

Query: 412 SSFNAKQHNPLHQNRQQYQDNSRCTLTTHSNNKSSMITNNVHASIPKRTYRDAASIYT* 588
            SF  KQ  P H +     DN+   LTT +NN    IT +  ++ P+RTYRDAAS++T*
Sbjct: 102 GSFIPKQQFPHHGH-----DNN---LTTLNNNNQESITFHHASTNPRRTYRDAASLFT* 152


 Score =  63 bits (151), Expect = 2e-010
 Identities = 35/44 (79%), Positives = 40/44 (90%), Gaps = 2/44 (4%)
 Frame = +3

Query:  60 MAMELELDDDVFFADISKQISLLIMDEDEQLNHVSLSTSSLAFQ 191
           MAMELELDDDVFFADISKQ++LLI DEDEQ N +SLS SS++FQ
Sbjct:   1 MAMELELDDDVFFADISKQLNLLITDEDEQ-NPISLS-SSVSFQ 42

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,907,053,864
Number of Sequences: 33410
Number of Extensions: 22907053864
Number of Successful Extensions: 728506909
Number of sequences better than 0.0: 0