BLASTX 7.6.2
Query= UN48075 /QuerySize=1405
(1404 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant ... 363 2e-100
TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich gly... 203 2e-052
TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich gly... 114 2e-025
TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular... 99 8e-021
>TAIR9_protein||AT1G63720.1 | Symbols: | EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: hydroxyproline-rich glycoprotein family protein
(TAIR:AT5G52430.1); Has 406 Blast hits to 313 proteins in 78 species:
Archae - 0; Bacteria - 2; Metazoa - 123; Fungi - 81; Plants - 111;
Viruses - 14; Other Eukaryotes - 75 (source: NCBI BLink). |
chr1:23636122-23637348 REVERSE
Length = 359
Score = 363 bits (931), Expect = 2e-100
Identities = 206/291 (70%), Positives = 224/291 (76%), Gaps = 35/291 (12%)
Frame = +1
Query: 100 MRGGASGNNVLETINAAATAFASSDDRVHHQPSPIHQKKRRWWNRFI---CFRPSTQRKK 270
MR GA+GNNV +TINAAA+A ASSDDR+ HQ SPIH KKR+WWNR+ CF S QR K
Sbjct: 1 MRSGANGNNVFDTINAAASAIASSDDRL-HQSSPIH-KKRKWWNRWSLLKCFGSSRQR-K 57
Query: 271 RIGKAALAPEPVPTDS----TSNSGYRSVMTALPFIAPPSSPASFFQSEPPSATQSPVGI 438
RIG + L PEPV S TSNSGYRSV+T LPFIAPPSSPASFFQSEPPSATQSPVGI
Sbjct: 58 RIGNSVLVPEPVSMSSSNSTTSNSGYRSVITTLPFIAPPSSPASFFQSEPPSATQSPVGI 117
Query: 439 LSFSPLPSNNHNNNNNSEERPSIFAIGPYAHEPQLVSPPVFSTYTTEPSSAPVTPPLDE- 615
LSFSPLP NN RPSIFAIGPYAHE QLVSPPVFSTYTTEPSSAP+TPPLD+
Sbjct: 118 LSFSPLPCNN---------RPSIFAIGPYAHETQLVSPPVFSTYTTEPSSAPITPPLDDS 168
Query: 616 SFYLTTTTPSSPEVPFAQLFNS---SSNYGVRSPV-SNYEFQFYQLPPGSPLAQLISPSS 783
S YLTTTTPSSPEVPFAQLFNS + +YG + P+ S+YEFQFYQLPPGSPL QLISPS
Sbjct: 169 SIYLTTTTPSSPEVPFAQLFNSNHQTGSYGYKFPMSSSYEFQFYQLPPGSPLGQLISPS- 227
Query: 784 VMSGSGATSPFPDG----VAQFQVSDPPKLLSPGKLRCSKSVTTPKEQNKI 924
GSG TSPFPDG FQVSDPPKLLSP + VTTP ++ KI
Sbjct: 228 --PGSGPTSPFPDGETSLFPHFQVSDPPKLLSPK----TAGVTTPCKEQKI 272
Score = 126 bits (316), Expect = 3e-029
Identities = 67/93 (72%), Positives = 75/93 (80%), Gaps = 3/93 (3%)
Frame = +2
Query: 908 KSRTRLRPNKPVSFDLDADHFIRCVDKKLRTTFPEA-SDQEAAQHSSSGSNKEFDFGTTD 1084
K + +RP+KPVSFDLDADH IRCVD+KLRTTFPEA SDQE+ HSS GSNKEF+FG TD
Sbjct: 268 KEQKIVRPHKPVSFDLDADHVIRCVDQKLRTTFPEASSDQESMNHSSLGSNKEFNFG-TD 326
Query: 1085 EIHLTGDDEHRDSTKNSSDWS-FPVMQSGTLS* 1180
E HLT D+ S KNS+DWS FPVMQSGTLS*
Sbjct: 327 EKHLTVDEHRSASPKNSNDWSFFPVMQSGTLS* 359
>TAIR9_protein||AT5G52430.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr5:21283093-21285045 REVERSE
Length = 439
Score = 203 bits (516), Expect = 2e-052
Identities = 124/267 (46%), Positives = 162/267 (60%), Gaps = 34/267 (12%)
Frame = +1
Query: 121 NNVLETINAAATAFASSDDRVHHQPSPIHQKKRRW---WNRFICFRPSTQRKKRIGKAAL 291
NN +ET+NAAATA +++ RV P +K RW W+ + CF + + KRIG A L
Sbjct: 6 NNSVETVNAAATAIVTAESRV----QPSSSQKGRWGKCWSLYSCF-GTQKNNKRIGNAVL 60
Query: 292 APEP----VPTDSTSNSGYRSVMTALPFIAPPSSPASFFQSEPPSATQSPVGILSFSPLP 459
PEP VP + NS S LPFIAPPSSPASF QS+P S + SPVG LS +
Sbjct: 61 VPEPVTSGVPVVTVQNSA-TSTTVVLPFIAPPSSPASFLQSDPSSVSHSPVGPLSLT--- 116
Query: 460 SNNHNNNNNSEERPSIFAIGPYAHEPQLVSPPVFSTYTTEPSSAPVTPPLDESFYLTTTT 639
+N + +E S+F +GPYA+E Q V+PPVFS + TEPS+AP TPP + S ++ TT
Sbjct: 117 ----SNTFSPKEPQSVFTVGPYANETQPVTPPVFSAFITEPSTAPYTPPPESSVHI--TT 170
Query: 640 PSSPEVPFAQLFNSS---------SNYGVRSPVSNYEFQFYQLPPGSP-LAQLISPSSVM 789
PSSPEVPFAQL SS S + S+YEF+ Q+ PGSP LISP SV+
Sbjct: 171 PSSPEVPFAQLLTSSLELTRRDSTSGMNQKFSSSHYEFRSNQVCPGSPGGGNLISPGSVI 230
Query: 790 SGSGATSPFP--DGVAQFQVSDPPKLL 864
S SG +SP+P + +F++ +PPK L
Sbjct: 231 SNSGTSSPYPGKSPMVEFRIGEPPKFL 257
>TAIR9_protein||AT4G25620.1 | Symbols: | hydroxyproline-rich glycoprotein
family protein | chr4:13067447-13069296 REVERSE
Length = 450
Score = 114 bits (283), Expect = 2e-025
Identities = 64/135 (47%), Positives = 81/135 (60%), Gaps = 24/135 (17%)
Frame = +1
Query: 493 ERPSIFAIGPYAHEPQLVSPPVFSTYTTEPSSAPVTPPLDESFYLTTTTPSSPEVPFAQL 672
E PS F IGPYAHE Q V+PPVFS +TTEPS+AP TPP + +PSSPEVPFAQL
Sbjct: 121 EPPSAFTIGPYAHETQPVTPPVFSAFTTEPSTAPFTPPPE--------SPSSPEVPFAQL 172
Query: 673 F---------NSSSNYGVRSPVSNYEFQFYQLPPGSPLAQLISPSSVMSGSGATSPFPD- 822
NS + ++YEF+ Q+ PGSP LISP GSG +SP+P
Sbjct: 173 LTSSLERARRNSGGGMNQKFSAAHYEFKSCQVYPGSPGGNLISP-----GSGTSSPYPGK 227
Query: 823 -GVAQFQVSDPPKLL 864
+ +F++ +PPK L
Sbjct: 228 CSIIEFRIGEPPKFL 242
Score = 91 bits (224), Expect = 2e-018
Identities = 48/107 (44%), Positives = 66/107 (61%), Gaps = 7/107 (6%)
Frame = +1
Query: 121 NNVLETINAAATAFASSDDRVHHQPSPIHQKKRRWWNRFICFRPSTQRKKRIGKAALAPE 300
N+ ++T+NAAA+A S++ R QPS + +K+ WW+ + CF S + KRIG A L PE
Sbjct: 6 NSSVDTVNAAASAIVSAESRT--QPSSVQKKRGSWWSLYWCF-GSKKNNKRIGHAVLVPE 62
Query: 301 PVPTDS----TSNSGYRSVMTALPFIAPPSSPASFFQSEPPSATQSP 429
P + + NS S +PFIAPPSSPASF S PPSA+ +P
Sbjct: 63 PAASGAAVAPVQNSSSNSTSIFMPFIAPPSSPASFLPSGPPSASHTP 109
>TAIR9_protein||AT1G76660.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
hydroxyproline-rich glycoprotein family protein (TAIR:AT5G52430.1); Has
280 Blast hits to 160 proteins in 42 species: Archae - 0; Bacteria - 4;
Metazoa - 55; Fungi - 17; Plants - 64; Viruses - 4; Other Eukaryotes -
136 (source: NCBI BLink). | chr1:28769157-28771036 REVERSE
Length = 432
Score = 99 bits (244), Expect = 8e-021
Identities = 62/139 (44%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Frame = +1
Query: 400 SEPPSATQSPVGILSFSPLPSNNHNNNNNSEERPSIFAIGPYAHEPQLVSPPVFSTYTTE 579
S P S T S + + SP + N+ S++A GPYAHE QLVSPPVFST+TTE
Sbjct: 73 SSPASFTNSALPSTTQSPNCYLSLAANSPGGPSSSMYATGPYAHETQLVSPPVFSTFTTE 132
Query: 580 PSSAPVTPPLDESFYLTTTTPSSPEVPFAQLFNSSSNYGVRSPVSNYEFQ-FYQLPPGSP 756
PS+AP TPP + T PSSP+VP+A+ SS + + Q Y L PGSP
Sbjct: 133 PSTAPFTPPPE---LARLTAPSSPDVPYARFLTSSMDLKNSGKGHYNDLQATYSLYPGSP 189
Query: 757 LAQLISPSSVMSGSGATSP 813
+ L SP S SG G SP
Sbjct: 190 ASALRSPISRASGDGLLSP 208
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,997,268,764
Number of Sequences: 33410
Number of Extensions: 22997268764
Number of Successful Extensions: 733918333
Number of sequences better than 0.0: 0
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