Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN48488


BLASTX 7.6.2

Query= UN48488 /QuerySize=859
        (858 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q8GYN5|RIN4_ARATH RPM1-interacting protein 4 OS=Arabidopsis t...    307   6e-083

>sp|Q8GYN5|RIN4_ARATH RPM1-interacting protein 4 OS=Arabidopsis thaliana GN=RIN4
        PE=1 SV=1

          Length = 211

 Score =  307 bits (786), Expect = 6e-083
 Identities = 162/217 (74%), Positives = 178/217 (82%), Gaps = 20/217 (9%)
 Frame = -2

Query: 779 RSNVPKFGNWEGEENVPYTAYFEKARKGRAAPGSRVTNPNDPEYNSD-----------SR 633
           RSNVPKFGNWE EENVPYTAYF+KARK R APGS++ NPNDPEYNSD           SR
Sbjct:   3 RSNVPKFGNWEAEENVPYTAYFDKARKTR-APGSKIMNPNDPEYNSDSQSQAPPHPPSSR 61

Query: 632 TKPEEVVDHPVRKSREGTRSREESGLKQFGGGGGDDSGSSSNEKRQGKSSQNNSYDNKSP 453
           TKPE+V    VR+SRE  RSREES LKQFG  GG  S + +  KRQG++SQNNSYDNKSP
Sbjct:  62 TKPEQV--DTVRRSREHMRSREESELKQFGDAGG--SSNEAANKRQGRASQNNSYDNKSP 117

Query: 452 LHKNSYDGGAARSKPKP-NLRPDESPEKVTVVPKFGDWDENNPASADGYTHIFNKVREER 276
           LHKNSYD G  +S+PKP NLR DESPEKVTVVPKFGDWDENNP+SADGYTHIFNKVREER
Sbjct: 118 LHKNSYD-GTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHIFNKVREER 176

Query: 275 STGANNVSGSSRTPTHASSRNSHSSSSKCCCFGFGGK 165
           S+GA NVSGSSRTPTH SSRN +++SS CCCFGFGGK
Sbjct: 177 SSGA-NVSGSSRTPTHQSSRNPNNTSS-CCCFGFGGK 211


 Score =  225 bits (572), Expect = 4e-058
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 8/161 (4%)
 Frame = -2

Query: 656 PEYNSDSRTKPEEVVDHPVRKSREGTRSREESGLKQFGGGGGDDSGSSSNEKRQGKSSQN 477
           P +   SRTKPE+V    VR+SRE  RSREES LKQFG  GG  S + +  KRQG++SQN
Sbjct:  54 PPHPPSSRTKPEQV--DTVRRSREHMRSREESELKQFGDAGG--SSNEAANKRQGRASQN 109

Query: 476 NSYDNKSPLHKNSYDGGAARSKPKP-NLRPDESPEKVTVVPKFGDWDENNPASADGYTHI 300
           NSYDNKSPLHKNSYD G  +S+PKP NLR DESPEKVTVVPKFGDWDENNP+SADGYTHI
Sbjct: 110 NSYDNKSPLHKNSYD-GTGKSRPKPTNLRADESPEKVTVVPKFGDWDENNPSSADGYTHI 168

Query: 299 FNKVREERSTGANNVSGSSRTPTHASSRNSHSSSSKCCCFG 177
           FNKVREERS+GA NVSGSSRTPTH SSRN +++SS CCCFG
Sbjct: 169 FNKVREERSSGA-NVSGSSRTPTHQSSRNPNNTSS-CCCFG 207

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,561,833,118
Number of Sequences: 518415
Number of Extensions: 182561833118
Number of Successful Extensions: 1116914633
Number of sequences better than 0.0: 0