BLASTX 7.6.2
Query= UN48513 /QuerySize=790
(789 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo ... 239 2e-063
TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo ... 239 2e-063
TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOS... 50 1e-006
TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide nucl... 49 3e-006
>TAIR9_protein||AT4G29060.1 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 954
Score = 239 bits (608), Expect = 2e-063
Identities = 143/213 (67%), Positives = 158/213 (74%), Gaps = 22/213 (10%)
Frame = +1
Query: 202 MATASPSSIISKAWLIPGAAFTVKKNDC-----FSPKAGQKQTPSSTQRLFLPLSTSLKL 366
MAT +PSS IS AWLIPGA+FTVKK+DC FS KAG KQ SSTQRL LPLSTSL+L
Sbjct: 1 MATITPSS-ISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 367 FPT---QFVLHPRRSRAAIGTDVVATVEEQDSPPPIADDA---------APTTTTTTTTT 510
FPT QFVLHP R A GTDVVA VEEQDS P +A+D AP T+ + T
Sbjct: 59 FPTHGRQFVLHPH--RRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGT 116
Query: 511 SQPRGRKSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKD 690
++P GRKSEMPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKD
Sbjct: 117 ARP-GRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKD 175
Query: 691 VASVVTIGQEVKVSLWKLTLSPNAFSYYA*DDD 789
V+SVVTIGQEVKV L + + S ++D
Sbjct: 176 VSSVVTIGQEVKVRLVEADIESKRISLTMREND 208
>TAIR9_protein||AT4G29060.2 | Symbols: emb2726 | emb2726 (embryo defective
2726); RNA binding / translation elongation factor |
chr4:14317744-14321315 FORWARD
Length = 710
Score = 239 bits (608), Expect = 2e-063
Identities = 143/213 (67%), Positives = 158/213 (74%), Gaps = 22/213 (10%)
Frame = +1
Query: 202 MATASPSSIISKAWLIPGAAFTVKKNDC-----FSPKAGQKQTPSSTQRLFLPLSTSLKL 366
MAT +PSS IS AWLIPGA+FTVKK+DC FS KAG KQ SSTQRL LPLSTSL+L
Sbjct: 1 MATITPSS-ISNAWLIPGASFTVKKSDCSIKCSFSRKAG-KQILSSTQRLVLPLSTSLRL 58
Query: 367 FPT---QFVLHPRRSRAAIGTDVVATVEEQDSPPPIADDA---------APTTTTTTTTT 510
FPT QFVLHP R A GTDVVA VEEQDS P +A+D AP T+ + T
Sbjct: 59 FPTHGRQFVLHPH--RRATGTDVVAAVEEQDSTPVVAEDKETVASEKSDAPAPTSQSRGT 116
Query: 511 SQPRGRKSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKD 690
++P GRKSEMPAVKNEELV GATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSD FVKD
Sbjct: 117 ARP-GRKSEMPAVKNEELVPGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDNFVKD 175
Query: 691 VASVVTIGQEVKVSLWKLTLSPNAFSYYA*DDD 789
V+SVVTIGQEVKV L + + S ++D
Sbjct: 176 VSSVVTIGQEVKVRLVEADIESKRISLTMREND 208
>TAIR9_protein||AT5G30510.1 | Symbols: RPS1, ARRPS1 | RPS1 (RIBOSOMAL PROTEIN
S1); RNA binding / structural constituent of ribosome |
chr5:11619262-11621223 REVERSE
Length = 417
Score = 50 bits (118), Expect = 1e-006
Identities = 24/59 (40%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +1
Query: 559 ELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVVTIGQEVKVSL 735
+L G+ G V++++P+GAF+D G +GL+HVSQ+S V D+A+V+ G +KV +
Sbjct: 260 QLGIGSVVLGVVQSLKPYGAFIDIGGI-NGLLHVSQISHDRVSDIATVLQPGDTLKVMI 317
>TAIR9_protein||AT5G14580.1 | Symbols: | polyribonucleotide
nucleotidyltransferase, putative | chr5:4697612-4703013 REVERSE
Length = 992
Score = 49 bits (115), Expect = 3e-006
Identities = 24/63 (38%), Positives = 38/63 (60%)
Frame = +1
Query: 529 KSEMPAVKNEELVAGATFTGKVRAIQPFGAFVDFGAFTDGLVHVSQLSDTFVKDVASVVT 708
+ ++ + ELV G + G V +I+ +GAFV+F GL+H+S+LS V V+ V+
Sbjct: 664 QEQVDFIIGRELVVGGVYKGTVSSIKEYGAFVEFPGGQQGLLHMSELSHEPVSKVSDVLD 723
Query: 709 IGQ 717
IGQ
Sbjct: 724 IGQ 726
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,170,570,536
Number of Sequences: 33410
Number of Extensions: 23170570536
Number of Successful Extensions: 734050235
Number of sequences better than 0.0: 0
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