BLASTX 7.6.2
Query= UN48547 /QuerySize=507
(506 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|B1A926|RPOC1_CARPA DNA-directed RNA polymerase subunit beta' ... 154 2e-037
sp|A9LYH6|RPOC1_ACOAM DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q3V543|RPOC1_ACOCL DNA-directed RNA polymerase subunit gamma ... 154 3e-037
sp|Q5QA71|RPOC1_ACOGR DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QJA6|RPOC1_AETCO DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QK09|RPOC1_ARAHI DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|P56763|RPOC1_ARATH DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q8S8Y0|RPOC1_ATRBE DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QK96|RPOC1_BARVE DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QKI3|RPOC1_CAPBU DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QKS2|RPOC1_CRUWA DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QL10|RPOC1_DRANE DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q2L8Z4|RPOC1_GOSHI DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QL97|RPOC1_LEPVR DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QLI5|RPOC1_LOBMA DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QLS4|RPOC1_NASOF DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q3C1G8|RPOC1_NICSY DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q33C47|RPOC1_NICTO DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|A4QJS4|RPOC1_OLIPU DNA-directed RNA polymerase subunit beta' ... 154 3e-037
sp|Q68S15|RPOC1_PANGI DNA-directed RNA polymerase subunit beta' ... 154 3e-037
>sp|B1A926|RPOC1_CARPA DNA-directed RNA polymerase subunit beta' OS=Carica
papaya GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (389), Expect = 2e-037
Identities = 78/86 (90%), Positives = 79/86 (91%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA*TSSGLKIKL 249
LFQTFVIRGLIRQHLA K K+
Sbjct: 405 LFQTFVIRGLIRQHLASNMGVAKSKI 430
>sp|A9LYH6|RPOC1_ACOAM DNA-directed RNA polymerase subunit beta' OS=Acorus
americanus GN=rpoC1 PE=3 SV=1
Length = 682
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q3V543|RPOC1_ACOCL DNA-directed RNA polymerase subunit gamma OS=Acorus
calamus GN=rpoC1 PE=3 SV=1
Length = 682
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q5QA71|RPOC1_ACOGR DNA-directed RNA polymerase subunit beta' OS=Acorus
gramineus GN=rpoC1 PE=3 SV=2
Length = 682
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QJA6|RPOC1_AETCO DNA-directed RNA polymerase subunit beta' OS=Aethionema
cordifolium GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QK09|RPOC1_ARAHI DNA-directed RNA polymerase subunit beta' OS=Arabis
hirsuta GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|P56763|RPOC1_ARATH DNA-directed RNA polymerase subunit beta' OS=Arabidopsis
thaliana GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q8S8Y0|RPOC1_ATRBE DNA-directed RNA polymerase subunit beta' OS=Atropa
belladonna GN=rpoC1 PE=3 SV=2
Length = 681
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QK96|RPOC1_BARVE DNA-directed RNA polymerase subunit beta' OS=Barbarea
verna GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QKI3|RPOC1_CAPBU DNA-directed RNA polymerase subunit beta' OS=Capsella
bursa-pastoris GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QKS2|RPOC1_CRUWA DNA-directed RNA polymerase subunit beta'
OS=Crucihimalaya wallichii GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QL10|RPOC1_DRANE DNA-directed RNA polymerase subunit beta' OS=Draba
nemorosa GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q2L8Z4|RPOC1_GOSHI DNA-directed RNA polymerase subunit beta' OS=Gossypium
hirsutum GN=rpoC1 PE=3 SV=1
Length = 685
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QL97|RPOC1_LEPVR DNA-directed RNA polymerase subunit beta' OS=Lepidium
virginicum GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QLI5|RPOC1_LOBMA DNA-directed RNA polymerase subunit beta' OS=Lobularia
maritima GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QLS4|RPOC1_NASOF DNA-directed RNA polymerase subunit beta' OS=Nasturtium
officinale GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q3C1G8|RPOC1_NICSY DNA-directed RNA polymerase subunit beta' OS=Nicotiana
sylvestris GN=rpoC1 PE=3 SV=2
Length = 681
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q33C47|RPOC1_NICTO DNA-directed RNA polymerase subunit beta' OS=Nicotiana
tomentosiformis GN=rpoC1 PE=3 SV=2
Length = 681
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|A4QJS4|RPOC1_OLIPU DNA-directed RNA polymerase subunit beta'
OS=Olimarabidopsis pumila GN=rpoC1 PE=3 SV=1
Length = 680
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
>sp|Q68S15|RPOC1_PANGI DNA-directed RNA polymerase subunit beta' OS=Panax
ginseng GN=rpoC1 PE=3 SV=2
Length = 682
Score = 154 bits (388), Expect = 3e-037
Identities = 76/76 (100%)
Frame = -1
Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404
Query: 326 LFQTFVIRGLIRQHLA 279
LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 182,561,833,118
Number of Sequences: 518415
Number of Extensions: 182561833118
Number of Successful Extensions: 1116914633
Number of sequences better than 0.0: 0
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