BLASTX 7.6.2

Query= UN48547 /QuerySize=507
        (506 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||ATCG00180.1 | Symbols: RPOC1 | RNA polymerase bet...    154   3e-038
TAIR9_protein||AT4G35800.1 | Symbols: NRPB1, RPB1, RNA_POL_II_LS...     50   7e-007

>TAIR9_protein||ATCG00180.1 | Symbols: RPOC1 | RNA polymerase beta' subunit-1 |
        chrC:20251-23084 REVERSE

          Length = 681

 Score =  154 bits (388), Expect = 3e-038
 Identities = 76/76 (100%)
 Frame = -1

Query: 506 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 327
           MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE
Sbjct: 345 MRDGHNKVYKSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIE 404

Query: 326 LFQTFVIRGLIRQHLA 279
           LFQTFVIRGLIRQHLA
Sbjct: 405 LFQTFVIRGLIRQHLA 420

>TAIR9_protein||AT4G35800.1 | Symbols: NRPB1, RPB1, RNA_POL_II_LSRNA_POL_II_LS,
        RNA_POL_II_LS | NRPB1 (RNA POLYMERASE II LARGE SUBUNIT); DNA binding /
        DNA-directed RNA polymerase | chr4:16961115-16967892 REVERSE

          Length = 1841

 Score =  50 bits (118), Expect = 7e-007
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = -1

Query: 479 KSFSDVIEGKEGRFRETLLGKRVDYSGRSVIVVGPSLSLHRCGLPREIAIEL 324
           KS    ++ KEGR R  L+GKRVD+S R+VI   P++++   G+P  IA+ L
Sbjct: 335 KSICSRLKAKEGRIRGNLMGKRVDFSARTVITPDPTINIDELGVPWSIALNL 386

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,170,570,536
Number of Sequences: 33410
Number of Extensions: 23170570536
Number of Successful Extensions: 734050235
Number of sequences better than 0.0: 0