BLASTX 7.6.2
Query= UN48557 /QuerySize=465
(464 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15225401|ref|NP_182033.1| protein transport protein sec61 sub... 153 6e-036
gi|297828225|ref|XP_002881995.1| SEC61 beta [Arabidopsis lyrata ... 153 6e-036
gi|15232357|ref|NP_191613.1| Preprotein translocase Sec, Sec61-b... 131 3e-029
gi|26450635|dbj|BAC42429.1| putative transport protein subunit [... 130 7e-029
gi|297820916|ref|XP_002878341.1| SEC61 beta [Arabidopsis lyrata ... 130 7e-029
gi|255630067|gb|ACU15387.1| unknown [Glycine max] 124 3e-027
gi|224067618|ref|XP_002302515.1| predicted protein [Populus tric... 123 6e-027
gi|224136268|ref|XP_002326819.1| predicted protein [Populus tric... 122 1e-026
gi|118481181|gb|ABK92542.1| unknown [Populus trichocarpa] 121 4e-026
gi|297734549|emb|CBI16600.3| unnamed protein product [Vitis vini... 120 5e-026
gi|297734544|emb|CBI16595.3| unnamed protein product [Vitis vini... 119 1e-025
gi|225453502|ref|XP_002277890.1| PREDICTED: similar to sec61beta... 119 2e-025
gi|225453513|ref|XP_002278236.1| PREDICTED: similar to sec61beta... 117 3e-025
gi|255541162|ref|XP_002511645.1| Protein transport protein Sec61... 115 2e-024
gi|116778810|gb|ABK21007.1| unknown [Picea sitchensis] 104 4e-021
gi|116792962|gb|ABK26570.1| unknown [Picea sitchensis] 102 1e-020
gi|226502354|ref|NP_001147265.1| protein transport protein Sec61... 102 1e-020
gi|242089283|ref|XP_002440474.1| hypothetical protein SORBIDRAFT... 100 7e-020
gi|297727869|ref|NP_001176298.1| Os11g0103900 [Oryza sativa Japo... 99 1e-019
gi|77552788|gb|ABA95584.1| Sec61beta family protein, expressed [... 99 1e-019
>gi|15225401|ref|NP_182033.1| protein transport protein sec61 subunit beta
[Arabidopsis thaliana]
Length = 82
Score = 153 bits (386), Expect = 6e-036
Identities = 76/82 (92%), Positives = 78/82 (95%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK 336
MSIGFIAFVAVLHVMGKLYFVK
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK 82
>gi|297828225|ref|XP_002881995.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
Length = 82
Score = 153 bits (386), Expect = 6e-036
Identities = 76/82 (92%), Positives = 78/82 (95%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPASGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK 336
MSIGFIAFVAVLHVMGKLYFVK
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK 82
>gi|15232357|ref|NP_191613.1| Preprotein translocase Sec, Sec61-beta subunit
protein [Arabidopsis thaliana]
Length = 81
Score = 131 bits (328), Expect = 3e-029
Identities = 66/78 (84%), Positives = 71/78 (91%), Gaps = 3/78 (3%)
Frame = +1
Query: 103 GAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIG 282
GAPQRGSAAA ASMRRRKP+ GG ++GG AG+MLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 5 GAPQRGSAAATASMRRRKPA---GGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61
Query: 283 FIAFVAVLHVMGKLYFVK 336
FIAFVAVLHVMGKLYFVK
Sbjct: 62 FIAFVAVLHVMGKLYFVK 79
>gi|26450635|dbj|BAC42429.1| putative transport protein subunit [Arabidopsis
thaliana]
Length = 81
Score = 130 bits (325), Expect = 7e-029
Identities = 65/78 (83%), Positives = 71/78 (91%), Gaps = 3/78 (3%)
Frame = +1
Query: 103 GAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIG 282
GAPQRGSAAA ASMR+RKP+ GG ++GG AG+MLQFYTDDAPGLKISPNVVL+MSIG
Sbjct: 5 GAPQRGSAAATASMRKRKPA---GGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLIMSIG 61
Query: 283 FIAFVAVLHVMGKLYFVK 336
FIAFVAVLHVMGKLYFVK
Sbjct: 62 FIAFVAVLHVMGKLYFVK 79
>gi|297820916|ref|XP_002878341.1| SEC61 beta [Arabidopsis lyrata subsp. lyrata]
Length = 79
Score = 130 bits (325), Expect = 7e-029
Identities = 67/77 (87%), Positives = 69/77 (89%), Gaps = 5/77 (6%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
APQRGSAAA ASMRRRKP GG A GGAAG+MLQFYTDDAPGLKISPNVVL+MSIGF
Sbjct: 6 APQRGSAAATASMRRRKP-----GGSAGGGAAGTMLQFYTDDAPGLKISPNVVLIMSIGF 60
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVAVLHVMGKLYFVK
Sbjct: 61 IAFVAVLHVMGKLYFVK 77
>gi|255630067|gb|ACU15387.1| unknown [Glycine max]
Length = 82
Score = 124 bits (311), Expect = 3e-027
Identities = 64/77 (83%), Positives = 69/77 (89%), Gaps = 4/77 (5%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
AP RGSAAA ASMRRR+ + GG ASGGAAG+MLQFYTDDAPGLKISPNVVLVMSIGF
Sbjct: 7 APPRGSAAATASMRRRRTT----GGAASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVA+LHVMGKLYFV+
Sbjct: 63 IAFVAILHVMGKLYFVR 79
>gi|224067618|ref|XP_002302515.1| predicted protein [Populus trichocarpa]
Length = 84
Score = 123 bits (308), Expect = 6e-027
Identities = 64/81 (79%), Positives = 69/81 (85%), Gaps = 2/81 (2%)
Frame = +1
Query: 94 VGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVM 273
VG AP RGSAAAAASMRRR+ G GGA GAAG+MLQFYTDDAPGLKISPNVVLVM
Sbjct: 3 VGGTAPPRGSAAAAASMRRRRTVSGGASGGA--GAAGTMLQFYTDDAPGLKISPNVVLVM 60
Query: 274 SIGFIAFVAVLHVMGKLYFVK 336
SIGFIAFVA+LHV+GKLY V+
Sbjct: 61 SIGFIAFVAILHVVGKLYLVR 81
>gi|224136268|ref|XP_002326819.1| predicted protein [Populus trichocarpa]
Length = 82
Score = 122 bits (305), Expect = 1e-026
Identities = 63/77 (81%), Positives = 69/77 (89%), Gaps = 4/77 (5%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
AP RGSAAAAASMRRR+ + GGASGGAAG+MLQFYTDDAPGLKISPNVVLVMSIGF
Sbjct: 7 APPRGSAAAAASMRRRRTT----SGGASGGAAGTMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVA+LHV+GKLY V+
Sbjct: 63 IAFVAILHVVGKLYLVR 79
>gi|118481181|gb|ABK92542.1| unknown [Populus trichocarpa]
Length = 84
Score = 121 bits (301), Expect = 4e-026
Identities = 63/81 (77%), Positives = 68/81 (83%), Gaps = 2/81 (2%)
Frame = +1
Query: 94 VGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVM 273
VG AP RGSAAAAASMRRR+ G GGA GAAG+MLQFYTDDAPGLKISPNVVLVM
Sbjct: 3 VGGTAPPRGSAAAAASMRRRRTVSGGASGGA--GAAGTMLQFYTDDAPGLKISPNVVLVM 60
Query: 274 SIGFIAFVAVLHVMGKLYFVK 336
SI FIAFVA+LHV+GKLY V+
Sbjct: 61 SIDFIAFVAILHVVGKLYLVR 81
>gi|297734549|emb|CBI16600.3| unnamed protein product [Vitis vinifera]
Length = 123
Score = 120 bits (300), Expect = 5e-026
Identities = 63/84 (75%), Positives = 73/84 (86%), Gaps = 5/84 (5%)
Frame = +1
Query: 88 RMVGSG-APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVV 264
+MV +G AP RGSAAAAAS+RRR+ + G +GGA+G+MLQFYTDDAPGLKISPNVV
Sbjct: 41 KMVQNGAAPPRGSAAAAASLRRRRTT----SGATAGGASGNMLQFYTDDAPGLKISPNVV 96
Query: 265 LVMSIGFIAFVAVLHVMGKLYFVK 336
LVMSIGFIAFVA+LHVMGKLYFV+
Sbjct: 97 LVMSIGFIAFVAILHVMGKLYFVR 120
>gi|297734544|emb|CBI16595.3| unnamed protein product [Vitis vinifera]
Length = 112
Score = 119 bits (297), Expect = 1e-025
Identities = 63/84 (75%), Positives = 73/84 (86%), Gaps = 5/84 (5%)
Frame = +1
Query: 88 RMVGSG-APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVV 264
+MV +G AP RGSAAAAAS+RRR+ + GG +G A+G+MLQFYTDDAPGLKISPNVV
Sbjct: 30 KMVQNGAAPPRGSAAAAASLRRRRTT----SGGTAGVASGNMLQFYTDDAPGLKISPNVV 85
Query: 265 LVMSIGFIAFVAVLHVMGKLYFVK 336
LVMSIGFIAFVA+LHVMGKLYFV+
Sbjct: 86 LVMSIGFIAFVAILHVMGKLYFVR 109
>gi|225453502|ref|XP_002277890.1| PREDICTED: similar to sec61beta family protein
[Vitis vinifera]
Length = 82
Score = 119 bits (296), Expect = 2e-025
Identities = 60/77 (77%), Positives = 68/77 (88%), Gaps = 4/77 (5%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
AP RGSAAAAAS+RRR+ + G +GGA+G+MLQFYTDDAPGLKISPNVVLVMSIGF
Sbjct: 7 APPRGSAAAAASLRRRRTT----SGATAGGASGNMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVA+LHVMGKLYFV+
Sbjct: 63 IAFVAILHVMGKLYFVR 79
>gi|225453513|ref|XP_002278236.1| PREDICTED: similar to sec61beta family protein
[Vitis vinifera]
Length = 82
Score = 117 bits (293), Expect = 3e-025
Identities = 60/77 (77%), Positives = 68/77 (88%), Gaps = 4/77 (5%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
AP RGSAAAAAS+RRR+ + GG +G A+G+MLQFYTDDAPGLKISPNVVLVMSIGF
Sbjct: 7 APPRGSAAAAASLRRRRTT----SGGTAGVASGNMLQFYTDDAPGLKISPNVVLVMSIGF 62
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVA+LHVMGKLYFV+
Sbjct: 63 IAFVAILHVMGKLYFVR 79
>gi|255541162|ref|XP_002511645.1| Protein transport protein Sec61 subunit beta,
putative [Ricinus communis]
Length = 82
Score = 115 bits (286), Expect = 2e-024
Identities = 58/77 (75%), Positives = 67/77 (87%), Gaps = 4/77 (5%)
Frame = +1
Query: 106 APQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGF 285
AP RGSAAA AS+RRR+ + GGASGGAAG+MLQFYTDD+ GLKISPNVVL+MSIGF
Sbjct: 7 APPRGSAAATASLRRRRTT----SGGASGGAAGTMLQFYTDDSSGLKISPNVVLIMSIGF 62
Query: 286 IAFVAVLHVMGKLYFVK 336
IAFVA+LHV+GKLY V+
Sbjct: 63 IAFVAILHVVGKLYLVR 79
>gi|116778810|gb|ABK21007.1| unknown [Picea sitchensis]
Length = 85
Score = 104 bits (258), Expect = 4e-021
Identities = 51/76 (67%), Positives = 61/76 (80%), Gaps = 1/76 (1%)
Frame = +1
Query: 100 SGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSI 279
+G P RGS AAAA +RRR+ SG+G G GA + G+ML+FYTDDAPGLKI+P VVLVMS+
Sbjct: 5 TGDPPRGS-AAAAGLRRRRMSGAGAGAGAGSSSGGNMLRFYTDDAPGLKITPTVVLVMSL 63
Query: 280 GFIAFVAVLHVMGKLY 327
GFI FV LHV+GKLY
Sbjct: 64 GFIGFVTALHVIGKLY 79
>gi|116792962|gb|ABK26570.1| unknown [Picea sitchensis]
Length = 122
Score = 102 bits (253), Expect = 1e-020
Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 1/85 (1%)
Frame = +1
Query: 73 SVNKRRMVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKIS 252
S + + + +G P RGS AAAA +RRR+ SG+G G GA + +ML+FYTDDAPGLKI+
Sbjct: 33 SSSLKMVARTGDPPRGS-AAAAGLRRRRMSGAGAGAGAGSSSGSNMLRFYTDDAPGLKIT 91
Query: 253 PNVVLVMSIGFIAFVAVLHVMGKLY 327
P VVLVMS+GFI FV LHV+GKLY
Sbjct: 92 PTVVLVMSLGFIGFVTTLHVIGKLY 116
>gi|226502354|ref|NP_001147265.1| protein transport protein Sec61 beta subunit
[Zea mays]
Length = 107
Score = 102 bits (253), Expect = 1e-020
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = +1
Query: 115 RGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGFIAF 294
RG+AAAAA MRRR+ + SGGGGG SGG +ML+FYTD+APGL++SP +VLVMS+ FI F
Sbjct: 28 RGTAAAAAGMRRRRATASGGGGGFSGGGGSNMLRFYTDEAPGLRLSPTMVLVMSLCFIGF 87
Query: 295 VAVLHVMGKLY 327
V LH+ GKLY
Sbjct: 88 VTALHIFGKLY 98
>gi|242089283|ref|XP_002440474.1| hypothetical protein SORBIDRAFT_09g001550
[Sorghum bicolor]
Length = 107
Score = 100 bits (247), Expect = 7e-020
Identities = 46/71 (64%), Positives = 57/71 (80%)
Frame = +1
Query: 115 RGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGFIAF 294
RG+AAAAA MRRR+ + S GGGG SGG +ML+FYTD+APGL++SP +VLVMS+ FI F
Sbjct: 28 RGTAAAAAGMRRRRATSSAGGGGFSGGGGSNMLRFYTDEAPGLRLSPTMVLVMSLCFIGF 87
Query: 295 VAVLHVMGKLY 327
V LH+ GKLY
Sbjct: 88 VTALHIFGKLY 98
>gi|297727869|ref|NP_001176298.1| Os11g0103900 [Oryza sativa Japonica Group]
Length = 107
Score = 99 bits (246), Expect = 1e-019
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +1
Query: 115 RGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGFIAF 294
RG+AAAAA MRRR+ S +GG GG SGG +ML+FYTD+APGL++SP +VLVMS+ FI F
Sbjct: 27 RGTAAAAAGMRRRRASTAGGSGGFSGGGGSNMLRFYTDEAPGLRLSPTMVLVMSLCFIGF 86
Query: 295 VAVLHVMGKLY 327
V LHV GKLY
Sbjct: 87 VTALHVFGKLY 97
>gi|77552788|gb|ABA95584.1| Sec61beta family protein, expressed [Oryza sativa
Japonica Group]
Length = 107
Score = 99 bits (246), Expect = 1e-019
Identities = 47/71 (66%), Positives = 57/71 (80%)
Frame = +1
Query: 115 RGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLVMSIGFIAF 294
RG+AAAAA MRRR+ S +GG GG SGG +ML+FYTD+APGL++SP +VLVMS+ FI F
Sbjct: 27 RGTAAAAAGMRRRRASTAGGSGGFSGGGGSNMLRFYTDEAPGLRLSPTMVLVMSLCFIGF 86
Query: 295 VAVLHVMGKLY 327
V LHV GKLY
Sbjct: 87 VTALHVFGKLY 97
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,261,706,102,847
Number of Sequences: 15229318
Number of Extensions: 5261706102847
Number of Successful Extensions: 1224141854
Number of sequences better than 0.0: 0
|
