BLASTX 7.6.2
Query= UN48557 /QuerySize=465
(464 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; p... 154 4e-038
TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; p... 154 4e-038
TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; p... 154 4e-038
TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; p... 154 4e-038
TAIR9_protein||AT3G60540.1 | Symbols: | sec61beta family protei... 137 5e-033
TAIR9_protein||AT3G60540.2 | Symbols: | sec61beta family protei... 137 5e-033
TAIR9_protein||AT5G60460.1 | Symbols: | sec61beta family protei... 97 5e-021
>TAIR9_protein||AT2G45070.1 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 154 bits (387), Expect = 4e-038
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK* 339
MSIGFIAFVAVLHVMGKLYFVK*
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK* 83
>TAIR9_protein||AT2G45070.2 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 154 bits (387), Expect = 4e-038
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK* 339
MSIGFIAFVAVLHVMGKLYFVK*
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK* 83
>TAIR9_protein||AT2G45070.3 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 154 bits (387), Expect = 4e-038
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK* 339
MSIGFIAFVAVLHVMGKLYFVK*
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK* 83
>TAIR9_protein||AT2G45070.4 | Symbols: SEC61 BETA | SEC61 BETA; protein
transporter | chr2:18587208-18587456 REVERSE
Length = 83
Score = 154 bits (387), Expect = 4e-038
Identities = 76/83 (91%), Positives = 78/83 (93%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVGSGAPQRGSAAA ASMRRRKP+ GGGGASGGAAGSMLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGSGAPQRGSAAATASMRRRKPTSGAGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLI 60
Query: 271 MSIGFIAFVAVLHVMGKLYFVK* 339
MSIGFIAFVAVLHVMGKLYFVK*
Sbjct: 61 MSIGFIAFVAVLHVMGKLYFVK* 83
>TAIR9_protein||AT3G60540.1 | Symbols: | sec61beta family protein |
chr3:22375132-22375377 REVERSE
Length = 82
Score = 137 bits (343), Expect = 5e-033
Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 3/82 (3%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVG GAPQRGSAAA ASMRRRKP+ GG ++GG AG+MLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGGGAPQRGSAAATASMRRRKPA---GGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLI 57
Query: 271 MSIGFIAFVAVLHVMGKLYFVK 336
MSIGFIAFVAVLHVMGKLYFVK
Sbjct: 58 MSIGFIAFVAVLHVMGKLYFVK 79
>TAIR9_protein||AT3G60540.2 | Symbols: | sec61beta family protein |
chr3:22375132-22375377 REVERSE
Length = 82
Score = 137 bits (343), Expect = 5e-033
Identities = 69/82 (84%), Positives = 74/82 (90%), Gaps = 3/82 (3%)
Frame = +1
Query: 91 MVGSGAPQRGSAAAAASMRRRKPSGSGGGGGASGGAAGSMLQFYTDDAPGLKISPNVVLV 270
MVG GAPQRGSAAA ASMRRRKP+ GG ++GG AG+MLQFYTDDAPGLKISPNVVL+
Sbjct: 1 MVGGGAPQRGSAAATASMRRRKPA---GGSSSAGGGAGTMLQFYTDDAPGLKISPNVVLI 57
Query: 271 MSIGFIAFVAVLHVMGKLYFVK 336
MSIGFIAFVAVLHVMGKLYFVK
Sbjct: 58 MSIGFIAFVAVLHVMGKLYFVK 79
>TAIR9_protein||AT5G60460.1 | Symbols: | sec61beta family protein |
chr5:24317590-24317919 REVERSE
Length = 110
Score = 97 bits (239), Expect = 5e-021
Identities = 55/84 (65%), Positives = 60/84 (71%), Gaps = 5/84 (5%)
Frame = +1
Query: 97 GSGAPQRGSAAAAASMRRRKPSGSGG--GGGASGGAAGS--MLQFYTDDAPGLKISPNVV 264
G AP RGSAAA A MRRR+ G GG GG SG +GS ML+FYTDDAPGLKISP VV
Sbjct: 22 GLAAP-RGSAAATAGMRRRRLGGGGGVSSGGGSGVGSGSSNMLRFYTDDAPGLKISPTVV 80
Query: 265 LVMSIGFIAFVAVLHVMGKLYFVK 336
L+MS+ FI FV LHV GKLY K
Sbjct: 81 LIMSLCFIGFVTALHVFGKLYLHK 104
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,170,570,536
Number of Sequences: 33410
Number of Extensions: 23170570536
Number of Successful Extensions: 734050235
Number of sequences better than 0.0: 0
|