BLASTX 7.6.2
Query= UN48723 /QuerySize=558
(557 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll... 179 9e-046
TAIR9_protein||AT3G54890.2 | Symbols: LHCA1 | LHCA1; chlorophyll... 116 1e-026
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 89 2e-018
TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll... 88 3e-018
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 87 6e-018
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 87 6e-018
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 86 1e-017
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 86 1e-017
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 86 1e-017
TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light h... 86 1e-017
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 85 2e-017
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 85 3e-017
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 82 1e-016
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 82 1e-016
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 82 2e-016
TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light h... 78 4e-015
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 77 5e-015
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 77 5e-015
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 76 1e-014
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 76 1e-014
>TAIR9_protein||AT3G54890.1 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339706-20340922 REVERSE
Length = 242
Score = 179 bits (454), Expect = 9e-046
Identities = 84/88 (95%)
Frame = +3
Query: 81 QRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPG 260
QRSMEKDPEKKKYPGGAFDPLGYSKDPKK EELKVKEIKNGRLALLAFVGFCVQQSAYPG
Sbjct: 155 QRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGRLALLAFVGFCVQQSAYPG 214
Query: 261 TGPLENLATHLADPWHKNIGDIVIPLN* 344
TGPLENLATHLADPWH NIGDIVIP N*
Sbjct: 215 TGPLENLATHLADPWHNNIGDIVIPFN* 242
>TAIR9_protein||AT3G54890.2 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339706-20340922 REVERSE
Length = 208
Score = 116 bits (289), Expect = 1e-026
Identities = 54/57 (94%)
Frame = +3
Query: 174 ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHKNIGDIVIPLN* 344
ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWH NIGDIVIP N*
Sbjct: 152 ELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLADPWHNNIGDIVIPFN* 208
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 89 bits (218), Expect = 2e-018
Identities = 46/82 (56%), Positives = 59/82 (71%), Gaps = 2/82 (2%)
Frame = +3
Query: 81 QRSMEKDPEKKKYPGGA-FDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYP 257
QR+ E D EK+ YPGG FDPLG + DP+K +L++ EIK+ RLA++AF+GF VQ +A
Sbjct: 205 QRNAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQLAEIKHARLAMVAFLGFAVQAAA-T 263
Query: 258 GTGPLENLATHLADPWHKNIGD 323
G GPL N ATHL+DP H I D
Sbjct: 264 GKGPLNNWATHLSDPLHTTIID 285
>TAIR9_protein||AT3G54890.4 | Symbols: LHCA1 | LHCA1; chlorophyll binding |
chr3:20339881-20340922 REVERSE
Length = 214
Score = 88 bits (216), Expect = 3e-018
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = +3
Query: 81 QRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGR 206
QRSMEKDPEKKKYPGGAFDPLGYSKDPKK EELKVKEIKNG+
Sbjct: 155 QRSMEKDPEKKKYPGGAFDPLGYSKDPKKLEELKVKEIKNGK 196
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 87 bits (214), Expect = 6e-018
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
+ E YPGG+FDPLG + DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GPLEN
Sbjct: 184 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLEN 242
Query: 279 LATHLADPWHKN 314
LA HLADP + N
Sbjct: 243 LADHLADPVNNN 254
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 87 bits (214), Expect = 6e-018
Identities = 43/72 (59%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
+ E YPGG+FDPLG + DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GPLEN
Sbjct: 183 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPLEN 241
Query: 279 LATHLADPWHKN 314
LA HLADP + N
Sbjct: 242 LADHLADPVNNN 253
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 86 bits (212), Expect = 1e-017
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
+ E YPGG+FDPLG + DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+EN
Sbjct: 185 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIEN 243
Query: 279 LATHLADPWHKN 314
LA HLADP + N
Sbjct: 244 LADHLADPVNNN 255
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 86 bits (212), Expect = 1e-017
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
+ E YPGG+FDPLG + DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+EN
Sbjct: 185 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIEN 243
Query: 279 LATHLADPWHKN 314
LA HLADP + N
Sbjct: 244 LADHLADPVNNN 255
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 86 bits (212), Expect = 1e-017
Identities = 42/72 (58%), Positives = 52/72 (72%), Gaps = 1/72 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
+ E YPGG+FDPLG + DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+EN
Sbjct: 185 EAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIEN 243
Query: 279 LATHLADPWHKN 314
LA HLADP + N
Sbjct: 244 LADHLADPVNNN 255
>TAIR9_protein||AT3G08940.2 | Symbols: LHCB4.2 | LHCB4.2 (light harvesting
complex PSII); chlorophyll binding | chr3:2717717-2718665 FORWARD
Length = 288
Score = 86 bits (211), Expect = 1e-017
Identities = 45/82 (54%), Positives = 57/82 (69%), Gaps = 2/82 (2%)
Frame = +3
Query: 81 QRSMEKDPEKKKYPGGA-FDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYP 257
QR+ E D EK+ YPGG FDPLG + DP K +L++ EIK+ RLA++ F+GF VQ +A
Sbjct: 202 QRNAELDSEKRLYPGGKFFDPLGLASDPVKKAQLQLAEIKHARLAMVGFLGFAVQAAA-T 260
Query: 258 GTGPLENLATHLADPWHKNIGD 323
G GPL N ATHL+DP H I D
Sbjct: 261 GKGPLNNWATHLSDPLHTTIID 282
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 85 bits (209), Expect = 2e-017
Identities = 42/77 (54%), Positives = 56/77 (72%), Gaps = 1/77 (1%)
Frame = +3
Query: 99 DPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
D E K +PGG FDPLG +KDP++ LKVKEIKNGRLA+ A +GF + Q+ G GP+EN
Sbjct: 195 DFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAMLGFFI-QAYVTGEGPVEN 253
Query: 279 LATHLADPWHKNIGDIV 329
LA HL+DP+ N+ ++
Sbjct: 254 LAKHLSDPFGNNLLTVI 270
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 85 bits (208), Expect = 3e-017
Identities = 41/73 (56%), Positives = 54/73 (73%), Gaps = 2/73 (2%)
Frame = +3
Query: 102 PEKKKYPGGA-FDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLEN 278
P YPGG FDPL S+DP FE+LKVKEIKNGRLA++A++GF Q+A+ G GP++N
Sbjct: 250 PGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGF-YAQAAFTGKGPVQN 308
Query: 279 LATHLADPWHKNI 317
L H++DP H N+
Sbjct: 309 LVDHVSDPLHNNL 321
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 82 bits (202), Expect = 1e-016
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 117 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 296
YPGGAFDPL ++DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+ENL HLA
Sbjct: 189 YPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLA 247
Query: 297 DPWHKN 314
DP N
Sbjct: 248 DPVANN 253
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 82 bits (202), Expect = 1e-016
Identities = 40/66 (60%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 117 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 296
YPGGAFDPL ++DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+ENL HLA
Sbjct: 189 YPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHLA 247
Query: 297 DPWHKN 314
DP N
Sbjct: 248 DPVANN 253
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 82 bits (200), Expect = 2e-016
Identities = 39/66 (59%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Frame = +3
Query: 117 YPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHLA 296
YPGGAFDPL ++DP+ F ELKVKE+KNGRLA+ + GF V Q+ G GP+ENL H+A
Sbjct: 190 YPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFV-QAIVTGKGPIENLFDHIA 248
Query: 297 DPWHKN 314
DP N
Sbjct: 249 DPVANN 254
>TAIR9_protein||AT2G40100.1 | Symbols: LHCB4.3 | LHCB4.3 (light harvesting
complex PSII); chlorophyll binding | chr2:16745884-16747190 FORWARD
Length = 277
Score = 78 bits (190), Expect = 4e-015
Identities = 38/69 (55%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +3
Query: 81 QRSMEKDPEKKKYPGGAFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPG 260
QR+ E DPEK+ YPGG FDPLG + DP+K + LK+ EIK+ RLA++AF+ F + Q+A+ G
Sbjct: 206 QRNSELDPEKRIYPGGYFDPLGLAADPEKLDTLKLAEIKHSRLAMVAFLIFAL-QAAFTG 264
Query: 261 TGPLENLAT 287
GP+ LAT
Sbjct: 265 KGPVSFLAT 273
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 77 bits (189), Expect = 5e-015
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 117 YPGGA-FDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 293
YPGG F+PLG+ KD K +ELK+KE+KNGRLA+LA +G+ + Q G GP +NL HL
Sbjct: 200 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFI-QGLVTGVGPYQNLLDHL 258
Query: 294 ADPWHKNI 317
ADP + N+
Sbjct: 259 ADPVNNNV 266
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 77 bits (189), Expect = 5e-015
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 117 YPGGA-FDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 293
YPGG F+PLG+ KD K +ELK+KE+KNGRLA+LA +G+ + Q G GP +NL HL
Sbjct: 145 YPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFI-QGLVTGVGPYQNLLDHL 203
Query: 294 ADPWHKNI 317
ADP + N+
Sbjct: 204 ADPVNNNV 211
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 76 bits (185), Expect = 1e-014
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 117 YPGG-AFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 293
YPGG +PLG +KD + + K+KEIKNGRLA++A +GF VQ S TGP++NL HL
Sbjct: 181 YPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASV-THTGPIDNLVEHL 239
Query: 294 ADPWHKNI 317
++PWHK I
Sbjct: 240 SNPWHKTI 247
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 76 bits (185), Expect = 1e-014
Identities = 37/68 (54%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Frame = +3
Query: 117 YPGG-AFDPLGYSKDPKKFEELKVKEIKNGRLALLAFVGFCVQQSAYPGTGPLENLATHL 293
YPGG +PLG +KD + + K+KEIKNGRLA++A +GF VQ S TGP++NL HL
Sbjct: 181 YPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASV-THTGPIDNLVEHL 239
Query: 294 ADPWHKNI 317
++PWHK I
Sbjct: 240 SNPWHKTI 247
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,213,704,276
Number of Sequences: 33410
Number of Extensions: 23213704276
Number of Successful Extensions: 734063689
Number of sequences better than 0.0: 0
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