BLASTX 7.6.2
Query= UN48781 /QuerySize=1109
(1108 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 373 1e-103
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 367 8e-102
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 205 6e-053
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 154 9e-038
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 107 2e-023
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 107 2e-023
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 97 2e-020
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 91 9e-019
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 91 9e-019
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 91 2e-018
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 91 2e-018
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 88 1e-017
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 86 5e-017
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 86 5e-017
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 86 5e-017
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 86 5e-017
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 84 1e-016
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 373 bits (957), Expect = 1e-103
Identities = 204/291 (70%), Positives = 231/291 (79%), Gaps = 9/291 (3%)
Frame = +3
Query: 54 VTSSFKPLAMADSSSSTIFSHPSLSTISSRCSFLSGRTNLPLSFSRV--SLSLKAKTNLK 227
+T S K LAM +SSSST+F PS+ ISS S R N LS V +LSLK+KT
Sbjct: 6 LTPSLKLLAMTNSSSSTLFCIPSIFNISSS---ESHRFNFSLSSRPVNLTLSLKSKTLRN 62
Query: 228 KSPFVSFVAQTSDWDAEEGGDVSASVAVEENEPEATFSEGDVGEGGDFPEPLEEAKLFVG 407
SP V+FV+QTS+W EE G+ + E+ SE VG FPEP EEAKLFVG
Sbjct: 63 SSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVG----FPEPPEEAKLFVG 118
Query: 408 NLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYD 587
NL YDVDSQALAMLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEAE AVEKFN ++
Sbjct: 119 NLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFE 178
Query: 588 LNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARV 767
+NGR LTVN+AAPRGSRPERQPRVY+ AFR+YVGNLPWDVD+GRLE++FSEHGKVV+ARV
Sbjct: 179 VNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARV 238
Query: 768 VYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 920
V DRETGRSRGFGFV MSNE E+N AIAALDGQN+EGRAI+VNVAEER RR
Sbjct: 239 VSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 367 bits (941), Expect = 8e-102
Identities = 212/313 (67%), Positives = 237/313 (75%), Gaps = 16/313 (5%)
Frame = +3
Query: 18 SHTS-SSAMASSIVTSSFKPLAMADSSSSTIFSHPSLS-------TISSRCSFLSGRTNL 173
SH S SS ++SS + SS L + FS SLS S SF++ ++
Sbjct: 25 SHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHLKKSPFVSFVAQTSDW 84
Query: 174 PLSFSRVSLSLKAKTNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVEENEPEATFSEGDV 353
S++++ N +S VS S+ DA E GDVS E +E E SEG V
Sbjct: 85 AEEGGEGSVAVEETENSLESQDVS-EGDESEGDASE-GDVS-----EGDESEGDVSEGAV 137
Query: 354 GEGGDFPEPLEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT 533
E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT
Sbjct: 138 SERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVT 197
Query: 534 MSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDN 713
MS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPAFRVYVGNLPWDVDN
Sbjct: 198 MSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDN 257
Query: 714 GRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRV 893
GRLEQ+FSEHGKVVEARVVYDRETGRSRGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRV
Sbjct: 258 GRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317
Query: 894 NVAEER-PRRGF* 929
NVAEER PRRG+*
Sbjct: 318 NVAEERPPRRGY* 330
Score = 139 bits (350), Expect = 3e-033
Identities = 84/128 (65%), Positives = 91/128 (71%), Gaps = 19/128 (14%)
Frame = +3
Query: 39 MASSIVTSSFKPLAMADSSSSTIFSHPSLSTI-------SSRCSFLSGRTNLPLSFSRVS 197
MASSIVTSS KPLAMADSSSSTIFSHPS+S+ SS S L+GR NLPLSFSRVS
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRSSSVSLLTGRINLPLSFSRVS 60
Query: 198 LSLKAKTNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVEEN-----------EPEATFSE 344
LSLK KT+LKKSPFVSFVAQTSDW AEEGG+ S +V EN E E SE
Sbjct: 61 LSLKTKTHLKKSPFVSFVAQTSDW-AEEGGEGSVAVEETENSLESQDVSEGDESEGDASE 119
Query: 345 GDVGEGGD 368
GDV EG +
Sbjct: 120 GDVSEGDE 127
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 205 bits (520), Expect = 6e-053
Identities = 127/277 (45%), Positives = 163/277 (58%), Gaps = 38/277 (13%)
Frame = +3
Query: 147 SFLSGRTNLPLSFSRVSLSLKAKTNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVEENEP 326
S LS + L+ VS S+ AK N S F VA TS+++ EE G A VA +
Sbjct: 29 SLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDG--FADVAPPK--- 83
Query: 327 EATFSEGDVGEGGDFPEPLEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETD 506
E +FS + KLFVGNL ++VDS LA LFE AG VE+ EVIY++ T
Sbjct: 84 EQSFS--------------ADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITG 129
Query: 507 QSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAF---- 674
+SRGFGFVTMS+V E E A ++FN Y+L+GR L VN P R + R +F
Sbjct: 130 RSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAGPPPPKREDGFSRGPRSSFGSSG 189
Query: 675 ---------------RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGF 809
RVYVGNL W VD+ LE +FSE GKVVEARV+YDR++GRS+GFGF
Sbjct: 190 SGYGGGGGSGAGSGNRVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGF 249
Query: 810 VTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 920
VT + E+ +AI +LDG +++GR IRV+ AE RP R
Sbjct: 250 VTYDSSQEVQNAIKSLDGADLDGRQIRVSEAEARPPR 286
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 154 bits (389), Expect = 9e-038
Identities = 81/178 (45%), Positives = 111/178 (62%), Gaps = 2/178 (1%)
Frame = +3
Query: 372 PEPLEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEE 551
P KL+ GNL Y+VDS LA + + E+ EV+YNR+T QSRGF FVTMS VE+
Sbjct: 79 PPAAVNTKLYFGNLPYNVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVED 138
Query: 552 AETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQV 731
++ + + GR L VN A +P ++P E +++VGNL W V + L
Sbjct: 139 CNIIIDNLDGTEYLGRALKVNFADK--PKPNKEPLYPETEHKLFVGNLSWTVTSESLAGA 196
Query: 732 FSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAE 905
F E G VV ARVV+D +TGRSRG+GFV S++ E+ A+ +LDG +EGRAIRVN+A+
Sbjct: 197 FRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 107 bits (266), Expect = 2e-023
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
R+YVGNL W VD+ LE +F+E GKVVEARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 855 LDGQNMEGRAIRVNVAEERPRRG 923
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 104 bits (259), Expect = 1e-022
Identities = 70/160 (43%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Frame = +3
Query: 195 SLSLKAKTNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVE---ENEPEATFSEGDVGEGG 365
SLS K ++ S F S + S AE +VAV E E + F++GD
Sbjct: 32 SLSFKLHSDHLVSIFASSALKCSS-PAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPV 90
Query: 366 DFPEPLEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTV 545
+ + KLFVGNL+++VDS LA LFE AG VE+ EVIY++ T +SRGFGFVTMST
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 546 EEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE---RQPR 656
E E A ++FN Y+ GR L VN P R E R PR
Sbjct: 151 AEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 107 bits (266), Expect = 2e-023
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
R+YVGNL W VD+ LE +F+E GKVVEARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 855 LDGQNMEGRAIRVNVAEERPRRG 923
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 104 bits (259), Expect = 1e-022
Identities = 70/160 (43%), Positives = 89/160 (55%), Gaps = 7/160 (4%)
Frame = +3
Query: 195 SLSLKAKTNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVE---ENEPEATFSEGDVGEGG 365
SLS K ++ S F S + S AE +VAV E E + F++GD
Sbjct: 32 SLSFKLHSDHLVSIFASSALKCSS-PAEYPSRFVRNVAVSSDFEVEEDDMFADGDDSAPV 90
Query: 366 DFPEPLEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTV 545
+ + KLFVGNL+++VDS LA LFE AG VE+ EVIY++ T +SRGFGFVTMST
Sbjct: 91 ERNSFSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTA 150
Query: 546 EEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPE---RQPR 656
E E A ++FN Y+ GR L VN P R E R PR
Sbjct: 151 AEVEAAAQQFNGYEFEGRPLRVNAGPPPPKREESFSRGPR 190
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 97 bits (239), Expect = 2e-020
Identities = 75/210 (35%), Positives = 111/210 (52%), Gaps = 20/210 (9%)
Frame = +3
Query: 45 SSIVTSSFKPLAMADSSSSTIFSHPSLSTISSRCSFLSGRTNLPLSFSRVS---LSLKAK 215
SS SS ++ A ++SS +P LS+ S+ F P SF V+ L
Sbjct: 2 SSAYCSSAVAVSAAATASSAATFNPLLSSHSNSQLFY---RFTPKSFKLVANCPNPLILH 58
Query: 216 TNLKKSPFVSFVAQTSDWDAEEGGDVSASVAVEENEPEATFSEGDVGEGGDFPEPL---- 383
+N+++ F A+T A++ ++ ASV EE E EGD GE E
Sbjct: 59 SNIRRHRFFC-AAETEASSADD--EIQASVEEEEEVEE----EGDEGEEEVEEEKQTTQA 111
Query: 384 --EEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAE 557
EE +L+VGNL Y + S L+ +F +AGTV +++Y++ TD+SRGFGFVTM ++EEA+
Sbjct: 112 SGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDKVTDRSRGFGFVTMGSIEEAK 171
Query: 558 TAVEKFNRYDLNGRLLTVN-KAAPRGSRPE 644
A++ FN + GR + VN PRG E
Sbjct: 172 EAMQMFNSSQIGGRTVKVNFPEVPRGGENE 201
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 91 bits (225), Expect = 9e-019
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
+++VG L W D+ L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 855 LDGQNMEGRAIRVNVAEER---PRRGF 926
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 91 bits (225), Expect = 9e-019
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
+++VG L W D+ L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 855 LDGQNMEGRAIRVNVAEER---PRRGF 926
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 91 bits (223), Expect = 2e-018
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3
Query: 672 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 851
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 852 ALDGQNMEGRAIRVNVAEERPRRG 923
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 91 bits (223), Expect = 2e-018
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +3
Query: 672 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 851
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 852 ALDGQNMEGRAIRVNVAEERPRRG 923
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 88 bits (216), Expect = 1e-017
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 855 LDGQNMEGRAIRVNVAEERPRRGF 926
+DG+ + GR IRVN A +RP G+
Sbjct: 96 MDGKELNGRHIRVNPANDRPSGGY 119
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 86 bits (210), Expect = 5e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 855 LDGQNMEGRAIRVNVAEERP 914
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 86 bits (210), Expect = 5e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 855 LDGQNMEGRAIRVNVAEERP 914
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 86 bits (210), Expect = 5e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 855 LDGQNMEGRAIRVNVAEERP 914
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 86 bits (210), Expect = 5e-017
Identities = 36/83 (43%), Positives = 59/83 (71%)
Frame = +3
Query: 675 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 854
++++G + + +D L + F+++G+VV+ RV+ DRETGRSRGFGFVT ++ + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 855 LDGQNMEGRAIRVNVAEERPRRG 923
LDG+++ GR ++VN A +R G
Sbjct: 101 LDGRDLHGRVVKVNYANDRTSGG 123
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 84 bits (207), Expect = 1e-016
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +3
Query: 663 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 842
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 843 AIAALDGQNMEGRAIRVNVAEERPRRG 923
AI ++G+ ++GR I VN A+ R G
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRGSGG 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,305,307,634
Number of Sequences: 33410
Number of Extensions: 23305307634
Number of Successful Extensions: 739566814
Number of sequences better than 0.0: 0
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