BLASTX 7.6.2
Query= UN48834 /QuerySize=1139
(1138 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G28370.1 | Symbols: | FUNCTIONS IN: molecular... 325 4e-089
TAIR9_protein||AT2G37200.1 | Symbols: | integral membrane prote... 204 1e-052
TAIR9_protein||AT3G23200.1 | Symbols: | unknown protein | chr3:... 143 2e-034
TAIR9_protein||AT3G53850.1 | Symbols: | FUNCTIONS IN: molecular... 142 6e-034
TAIR9_protein||AT5G02060.1 | Symbols: | integral membrane prote... 133 2e-031
TAIR9_protein||AT3G50810.1 | Symbols: | unknown protein | chr3:... 118 9e-027
TAIR9_protein||AT1G49405.1 | Symbols: | integral membrane prote... 106 5e-023
TAIR9_protein||AT4G37235.1 | Symbols: | unknown protein | chr4:... 90 2e-018
>TAIR9_protein||AT2G28370.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein
family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST
Arabidopsis thaliana protein match is: integral membrane protein,
putative (TAIR:AT2G37200.1); Has 100 Blast hits to 100 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr2:12132092-12133447 FORWARD
Length = 180
Score = 325 bits (832), Expect = 4e-089
Identities = 167/186 (89%), Positives = 173/186 (93%), Gaps = 6/186 (3%)
Frame = +2
Query: 347 MNVSHASVHPVEDPPPATAATQQQVENNHPPRVRMDDIEGMPGTLLGVALRFFQFFFAAA 526
MNVSHASVHPVEDPP A +VEN PPRVRMDD+EGMPGTLLG+ALRFFQF FAAA
Sbjct: 1 MNVSHASVHPVEDPPAAAT----EVEN--PPRVRMDDMEGMPGTLLGLALRFFQFLFAAA 54
Query: 527 SLSVMASTSDFPSVTAFCYLVAATGLQSLWSLALAAVDVYAIMVKRSLQNRRLVSVFAIG 706
+L VMASTSDFPSVTAFCYLVAATGLQSLWSLALA VDVYAIMVKRSLQNRRLVS+FAIG
Sbjct: 55 ALCVMASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIG 114
Query: 707 DGVTSTLTFAAACASAGITVLIDNDLNSCSQNHCVQFETSTALAFISWFAALPSFLFNFW 886
DGVTSTLTFAAACASAGITVLIDNDLNSC+QNHCVQFETSTALAFISWFAALPSFLFNFW
Sbjct: 115 DGVTSTLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFW 174
Query: 887 SLASR* 904
SLASR*
Sbjct: 175 SLASR* 180
>TAIR9_protein||AT2G37200.1 | Symbols: | integral membrane protein, putative |
chr2:15622098-15623047 REVERSE
Length = 181
Score = 204 bits (517), Expect = 1e-052
Identities = 107/180 (59%), Positives = 130/180 (72%), Gaps = 6/180 (3%)
Frame = +2
Query: 365 SVHPVEDPPPATAATQQQVENNHPPRVRMDDIEGMPGTLLGVALRFFQFFFAAASLSVMA 544
++HPV+ P A T ++ P VRM D++GMPGT G+ LR QF A S+SVM
Sbjct: 8 AIHPVDALP--VAPTAGAIDR---PPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVMV 62
Query: 545 STSDFPSVTAFCYLVAATGLQSLWSLALAAVDVYAIMVKRSLQNRRLVSVFAIGDGVTST 724
+TSDF S TAFC LV A LQSLWSL+L +D YA++V+RSL+N +V F IGDGVTST
Sbjct: 63 TTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTST 122
Query: 725 LTFAAACASAGITVLIDNDLNSCSQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR* 904
LTFAAA ASAGITVLI NDL C+ NHC +FET+TA+AFISWFA PSF+ NFWSLA+ *
Sbjct: 123 LTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLATH* 181
>TAIR9_protein||AT3G23200.1 | Symbols: | unknown protein | chr3:8281659-8282603
FORWARD
Length = 153
Score = 143 bits (360), Expect = 2e-034
Identities = 77/151 (50%), Positives = 99/151 (65%), Gaps = 1/151 (0%)
Frame = +2
Query: 449 MDDIEGMPGTLLGVALRFFQFFFAAASLSVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 628
M DI G PGTL G+ LR Q FAA S+S M ++ F S TAFCYL+AA GLQ +WS L
Sbjct: 1 MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60
Query: 629 AAVDVYAIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCS-QNH 805
A +D +A++ K++L + LVS+F +GD VTSTL+ A A +SAGITVL DL SCS +
Sbjct: 61 AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120
Query: 806 CVQFETSTALAFISWFAALPSFLFNFWSLAS 898
C +++ S ALAF+ W S L W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151
>TAIR9_protein||AT3G53850.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: Uncharacterised
protein family UPF0497, trans-membrane plant (InterPro:IPR006702); BEST
Arabidopsis thaliana protein match is: integral membrane protein,
putative (TAIR:AT5G02060.1); Has 100 Blast hits to 100 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
100; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr3:19948262-19948994 REVERSE
Length = 155
Score = 142 bits (356), Expect = 6e-034
Identities = 74/153 (48%), Positives = 99/153 (64%), Gaps = 3/153 (1%)
Frame = +2
Query: 449 MDDIEGMPGTLLGVALRFFQFFFAAASLSVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 628
M + G PGT+ G+ LR Q AAAS+ VM S +F TAFCYL+A+ GLQ LWS L
Sbjct: 1 MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60
Query: 629 AAVDVYAIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDNDLNSC---SQ 799
A +DVYA+ K+ LQN LVS+F +GD VT+ L+ AAAC+SAG+ VL + D+ C SQ
Sbjct: 61 ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120
Query: 800 NHCVQFETSTALAFISWFAALPSFLFNFWSLAS 898
C+++E + AL+F++W S FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153
>TAIR9_protein||AT5G02060.1 | Symbols: | integral membrane protein, putative |
chr5:404908-405774 FORWARD
Length = 153
Score = 133 bits (334), Expect = 2e-031
Identities = 72/151 (47%), Positives = 94/151 (62%), Gaps = 3/151 (1%)
Frame = +2
Query: 449 MDDIEGMPGTLLGVALRFFQFFFAAASLSVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 628
M + G PGT+ G+ LR Q AAAS+ VM S+ DF + TAFC+LVA+ GLQ +WS L
Sbjct: 1 MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60
Query: 629 AAVDVYAIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCSQN-- 802
A +DVYAI K L++ L+S+F +GD VT+ L AAAC+SAG+TVL D C Q
Sbjct: 61 ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120
Query: 803 -HCVQFETSTALAFISWFAALPSFLFNFWSL 892
C +F+ S L+F +WF A S FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151
>TAIR9_protein||AT3G50810.1 | Symbols: | unknown protein |
chr3:18889002-18889868 REVERSE
Length = 155
Score = 118 bits (294), Expect = 9e-027
Identities = 65/151 (43%), Positives = 85/151 (56%), Gaps = 1/151 (0%)
Frame = +2
Query: 449 MDDIEGMPGTLLGVALRFFQFFFAAASLSVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 628
M+ + G GT ALRF Q F+AASL M DF T FCYL + + WS+ L
Sbjct: 1 MEHVPGSFGTSASFALRFGQTIFSAASLIFMCFDFDFYDFTTFCYLAMVMAIVTPWSILL 60
Query: 629 AAVDVYAIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDN-DLNSCSQNH 805
A D Y+++VK Q R++S+ GD V S L+ ACA A T L+ + D C +
Sbjct: 61 ALTDTYSVLVKLLPQELRVLSIVFAGDFVLSFLSLGGACAVASATELLASADGKICDGSL 120
Query: 806 CVQFETSTALAFISWFAALPSFLFNFWSLAS 898
C+Q++ S ALAF+ WF L S LFNFWSL S
Sbjct: 121 CIQYQVSAALAFLCWFLLLASALFNFWSLPS 151
>TAIR9_protein||AT1G49405.1 | Symbols: | integral membrane protein, putative |
chr1:18284335-18284947 REVERSE
Length = 153
Score = 106 bits (262), Expect = 5e-023
Identities = 54/150 (36%), Positives = 84/150 (56%)
Frame = +2
Query: 449 MDDIEGMPGTLLGVALRFFQFFFAAASLSVMASTSDFPSVTAFCYLVAATGLQSLWSLAL 628
M ++ G GT ++LR Q A SL M F TAFCYLV L W+L L
Sbjct: 1 MVEVPGSVGTTASLSLRLGQMVLAFGSLLFMTIGVRFYQFTAFCYLVTIMSLAIPWNLTL 60
Query: 629 AAVDVYAIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCSQNHC 808
A VD+Y +++++ Q R++ +IGD V S L A+A ++A + ++ ++ +SC C
Sbjct: 61 AMVDIYCVILQQPFQKPRILLAISIGDWVVSVLALASASSAASVVDILRSNESSCPPTIC 120
Query: 809 VQFETSTALAFISWFAALPSFLFNFWSLAS 898
+++ + LAF++WF +L S LFN W L S
Sbjct: 121 NRYQFAATLAFLTWFLSLSSSLFNLWLLPS 150
>TAIR9_protein||AT4G37235.1 | Symbols: | unknown protein |
chr4:17518052-17519671 FORWARD
Length = 153
Score = 90 bits (222), Expect = 2e-018
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 6/144 (4%)
Frame = +2
Query: 473 GTLLGVALRFFQFFFAAASLSVMA--STSDFPSVTAFCYLVAATGLQSLWSLALAAVDVY 646
GT LR Q F++ASL M DF + T FCYLV GL + WS+ LA ++ Y
Sbjct: 9 GTSSSFVLRLGQTLFSSASLLFMCFNDDEDFYAYTTFCYLVTVMGLVTPWSVTLALMEAY 68
Query: 647 AIMVKRSLQNRRLVSVFAIGDGVTSTLTFAAACASAGITVLIDNDLNSCSQNHCVQFETS 826
+I+VK+ ++SV GD V S L+ AC++A + VL L + C +++ S
Sbjct: 69 SILVKKLPMQATVISVIVAGDFVLSFLSLGGACSTASVAVL----LMDAGEKQCDRYKLS 124
Query: 827 TALAFISWFAALPSFLFNFWSLAS 898
+AF+S F + S FNF L S
Sbjct: 125 ATMAFLSSFLSFASTFFNFCLLPS 148
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,305,307,634
Number of Sequences: 33410
Number of Extensions: 23305307634
Number of Successful Extensions: 739566814
Number of sequences better than 0.0: 0
|
