BLASTX 7.6.2
Query= UN48943 /QuerySize=847
(846 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|1345968|sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty a... 431 8e-119
gi|408490|gb|AAA61774.1| omega-3 fatty acid desaturase [Brassica... 431 8e-119
gi|239809231|gb|ACS26170.1| chloroplast fatty acid desaturase 7 ... 430 2e-118
gi|46849975|gb|AAT02410.1| chloroplast omega-3 fatty acid desatu... 425 6e-117
gi|7378667|emb|CAB85467.1| chloroplast omega-3 fatty acid desatu... 416 2e-114
gi|154813792|gb|ABS86961.1| chloroplast omega-3 fatty acid desat... 414 8e-114
gi|118430554|gb|ABK91880.1| omega-3 fatty acid desaturase [Descu... 412 4e-113
gi|15229692|ref|NP_187727.1| omega-3 fatty acid desaturase [Arab... 412 5e-113
gi|14488094|gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidops... 412 5e-113
gi|62319074|dbj|BAD94215.1| omega-3 fatty acid desaturase, chlor... 412 5e-113
gi|297829670|ref|XP_002882717.1| hypothetical protein ARALYDRAFT... 407 1e-111
gi|15239175|ref|NP_196177.1| omega-3 fatty acid desaturase (delt... 387 2e-105
gi|17064784|gb|AAL32546.1| temperature-sensitive omega-3 fatty a... 387 2e-105
gi|229418590|gb|AAW78909.2| fatty acid desaturase [Brassica rapa... 381 9e-104
gi|297806575|ref|XP_002871171.1| hypothetical protein ARALYDRAFT... 378 8e-103
gi|239809235|gb|ACS26172.1| chloroplast fatty acid desaturase 8 ... 376 3e-102
gi|239809233|gb|ACS26171.1| chloroplast fatty acid desaturase 8 ... 375 5e-102
gi|255574784|ref|XP_002528299.1| Omega-3 fatty acid desaturase, ... 371 1e-100
gi|224109306|ref|XP_002315154.1| predicted protein [Populus tric... 366 2e-099
gi|91992438|gb|ABE72960.1| chloroplast omega-3 fatty acid desatu... 365 7e-099
>gi|1345968|sp|P48618.1|FAD3C_BRANA RecName: Full=Omega-3 fatty acid desaturase,
chloroplastic; Flags: Precursor
Length = 404
Score = 431 bits (1107), Expect = 8e-119
Identities = 197/202 (97%), Positives = 199/202 (98%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMA LLVCLNFVMGPMQMLKL
Sbjct: 203 PFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKL 262
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
YV+PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 263 YVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 322
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD
Sbjct: 323 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 382
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYYEADPNLYG+IKVTAE
Sbjct: 383 EGDVVYYEADPNLYGEIKVTAE 404
>gi|408490|gb|AAA61774.1| omega-3 fatty acid desaturase [Brassica napus]
Length = 329
Score = 431 bits (1107), Expect = 8e-119
Identities = 197/202 (97%), Positives = 199/202 (98%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMA LLVCLNFVMGPMQMLKL
Sbjct: 128 PFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKL 187
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
YV+PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 188 YVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 247
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD
Sbjct: 248 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 307
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYYEADPNLYG+IKVTAE
Sbjct: 308 EGDVVYYEADPNLYGEIKVTAE 329
>gi|239809231|gb|ACS26170.1| chloroplast fatty acid desaturase 7 [Brassica
napus]
Length = 432
Score = 430 bits (1104), Expect = 2e-118
Identities = 196/202 (97%), Positives = 199/202 (98%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMA LLVCLNFVMGPMQMLKL
Sbjct: 231 PFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAVLLVCLNFVMGPMQMLKL 290
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
YV+PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 291 YVIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 350
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD
Sbjct: 351 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 410
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYYEADPNLYG+IKVTA+
Sbjct: 411 EGDVVYYEADPNLYGEIKVTAD 432
>gi|46849975|gb|AAT02410.1| chloroplast omega-3 fatty acid desaturase [Brassica
napus]
Length = 439
Score = 425 bits (1091), Expect = 6e-117
Identities = 194/202 (96%), Positives = 199/202 (98%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKERNDVLTSTA WTAMAALLVCLNFVMGPMQMLKL
Sbjct: 238 PFYLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTAWWTAMAALLVCLNFVMGPMQMLKL 297
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
YV+PYWINVMWLDFVTYLHHHGH+DKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHD+G
Sbjct: 298 YVIPYWINVMWLDFVTYLHHHGHDDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDVG 357
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD
Sbjct: 358 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 417
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYYEADP+LYGQIKVTA+
Sbjct: 418 EGDVVYYEADPDLYGQIKVTAD 439
>gi|7378667|emb|CAB85467.1| chloroplast omega-3 fatty acid desaturase [Brassica
juncea]
Length = 429
Score = 416 bits (1069), Expect = 2e-114
Identities = 188/199 (94%), Positives = 196/199 (98%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHY+PDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL
Sbjct: 231 PFYLWARSPGKKGSHYNPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 290
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG+INNIHHDIG
Sbjct: 291 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGVINNIHHDIG 350
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKS+KEDH+VSD
Sbjct: 351 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSMKEDHYVSD 410
Query: 295 EGDVVYYEADPNLYGQIKV 239
EGDVVYY+ADPNLYG++KV
Sbjct: 411 EGDVVYYKADPNLYGEVKV 429
>gi|154813792|gb|ABS86961.1| chloroplast omega-3 fatty acid desaturase
[Descurainia sophia]
Length = 451
Score = 414 bits (1064), Expect = 8e-114
Identities = 188/202 (93%), Positives = 196/202 (97%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKE+ DVLTSTACWTAMAALLVCLNF MGP+QMLKL
Sbjct: 250 PFYLWARSPGKKGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFTMGPIQMLKL 309
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 310 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 369
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHY+L EATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDH+VSD
Sbjct: 370 THVIHHLFPQIPHYNLVEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHYVSD 429
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYY+ADPNLYG+IKV A+
Sbjct: 430 EGDVVYYKADPNLYGEIKVRAD 451
>gi|118430554|gb|ABK91880.1| omega-3 fatty acid desaturase [Descurainia sophia]
Length = 449
Score = 412 bits (1058), Expect = 4e-113
Identities = 186/202 (92%), Positives = 195/202 (96%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKE+ DVLTSTACWTAMAALLVCLNF +GP+QMLKL
Sbjct: 248 PFYLWARSPGKKGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 307
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 308 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 367
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLL ILAKSIKEDH+VSD
Sbjct: 368 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSD 427
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYY+ADPNLYG++KV A+
Sbjct: 428 EGDVVYYKADPNLYGEVKVRAD 449
>gi|15229692|ref|NP_187727.1| omega-3 fatty acid desaturase [Arabidopsis
thaliana]
Length = 446
Score = 412 bits (1057), Expect = 5e-113
Identities = 186/202 (92%), Positives = 195/202 (96%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKER DVLTSTACWTAMAALLVCLNF +GP+QMLKL
Sbjct: 245 PFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 304
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 305 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 364
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLL ILAKSIKEDH+VSD
Sbjct: 365 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSD 424
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EG+VVYY+ADPNLYG++KV A+
Sbjct: 425 EGEVVYYKADPNLYGEVKVRAD 446
>gi|14488094|gb|AAK63867.1|AF389295_1 AT3g11170/F9F8_4 [Arabidopsis thaliana]
Length = 446
Score = 412 bits (1057), Expect = 5e-113
Identities = 186/202 (92%), Positives = 195/202 (96%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKER DVLTSTACWTAMAALLVCLNF +GP+QMLKL
Sbjct: 245 PFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 304
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 305 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 364
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLL ILAKSIKEDH+VSD
Sbjct: 365 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSD 424
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EG+VVYY+ADPNLYG++KV A+
Sbjct: 425 EGEVVYYKADPNLYGEVKVRAD 446
>gi|62319074|dbj|BAD94215.1| omega-3 fatty acid desaturase, chloroplast
precursor [Arabidopsis thaliana]
Length = 206
Score = 412 bits (1057), Expect = 5e-113
Identities = 186/202 (92%), Positives = 195/202 (96%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKER DVLTSTACWTAMAALLVCLNF +GP+QMLKL
Sbjct: 5 PFYLWARSPGKKGSHYHPDSDLFLPKERKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 64
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 65 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 124
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLL ILAKSIKEDH+VSD
Sbjct: 125 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSD 184
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EG+VVYY+ADPNLYG++KV A+
Sbjct: 185 EGEVVYYKADPNLYGEVKVRAD 206
>gi|297829670|ref|XP_002882717.1| hypothetical protein ARALYDRAFT_478456
[Arabidopsis lyrata subsp. lyrata]
Length = 446
Score = 407 bits (1045), Expect = 1e-111
Identities = 184/202 (91%), Positives = 194/202 (96%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LWARSPGKKGSHYHPDSDLFLPKE+ DVLTSTACWTAMAALLVCLNF +GP+QMLKL
Sbjct: 245 PFYLWARSPGKKGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFTIGPIQMLKL 304
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG
Sbjct: 305 YGIPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 364
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREPDKSGPLPLHLL ILAKSIKEDH+VSD
Sbjct: 365 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPDKSGPLPLHLLEILAKSIKEDHYVSD 424
Query: 295 EGDVVYYEADPNLYGQIKVTAE 230
EGDVVYY+ADPNL+ ++KV A+
Sbjct: 425 EGDVVYYKADPNLHREVKVRAD 446
>gi|15239175|ref|NP_196177.1| omega-3 fatty acid desaturase (delta-15
desaturase) [Arabidopsis thaliana]
Length = 435
Score = 387 bits (992), Expect = 2e-105
Identities = 176/196 (89%), Positives = 182/196 (92%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK+GSHYHPDSDLFLPKE+ DVLTSTACWTAMAALLVCLNFVMGP+QMLKL
Sbjct: 238 PFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKL 297
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 298 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 357
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREP SGPLPLHLLG L KS+K+DHFVSD
Sbjct: 358 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSD 417
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEADP L GQ
Sbjct: 418 TGDVVYYEADPKLNGQ 433
>gi|17064784|gb|AAL32546.1| temperature-sensitive omega-3 fatty acid desaturase,
chloroplast precursor [Arabidopsis thaliana]
Length = 435
Score = 387 bits (992), Expect = 2e-105
Identities = 176/196 (89%), Positives = 182/196 (92%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK+GSHYHPDSDLFLPKE+ DVLTSTACWTAMAALLVCLNFVMGP+QMLKL
Sbjct: 238 PFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVLTSTACWTAMAALLVCLNFVMGPIQMLKL 297
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 298 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 357
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREP SGPLPLHLLG L KS+K+DHFVSD
Sbjct: 358 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSD 417
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEADP L GQ
Sbjct: 418 TGDVVYYEADPKLNGQ 433
>gi|229418590|gb|AAW78909.2| fatty acid desaturase [Brassica rapa subsp.
pekinensis]
Length = 432
Score = 381 bits (977), Expect = 9e-104
Identities = 173/196 (88%), Positives = 180/196 (91%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK GSH+ PDSDLFLPKE+ DV+TSTACWTAMAALLVCLNFVMGP+QMLKL
Sbjct: 235 PFYLWGRSPGKNGSHFDPDSDLFLPKEKKDVVTSTACWTAMAALLVCLNFVMGPIQMLKL 294
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 295 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 354
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREP SGPLPLHLLG L KS+K+DHFVSD
Sbjct: 355 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSD 414
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEADP L GQ
Sbjct: 415 TGDVVYYEADPKLSGQ 430
>gi|297806575|ref|XP_002871171.1| hypothetical protein ARALYDRAFT_487353
[Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 378 bits (969), Expect = 8e-103
Identities = 170/196 (86%), Positives = 181/196 (92%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK+GSHYHPDSDLFLPKE+ DV+TSTACWTAMAALLVCLNFV+GP+QMLKL
Sbjct: 238 PFYLWNRSPGKQGSHYHPDSDLFLPKEKKDVVTSTACWTAMAALLVCLNFVIGPIQMLKL 297
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 298 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 357
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPV+GKYYREP SGPLPLHLLG L KS+K+DHF+S+
Sbjct: 358 THVIHHLFPQIPHYHLVEATEAAKPVIGKYYREPKNSGPLPLHLLGSLIKSMKQDHFISN 417
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEAD L GQ
Sbjct: 418 TGDVVYYEADQKLNGQ 433
>gi|239809235|gb|ACS26172.1| chloroplast fatty acid desaturase 8 [Brassica
napus]
Length = 432
Score = 376 bits (964), Expect = 3e-102
Identities = 170/196 (86%), Positives = 179/196 (91%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK GSH+ PDSDLFLPKE+ DV+TSTA WTAMAALLVCLNFVMGP+QMLKL
Sbjct: 235 PFYLWGRSPGKNGSHFDPDSDLFLPKEKKDVVTSTASWTAMAALLVCLNFVMGPIQMLKL 294
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 295 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 354
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKP++GKYYREP SGPLPLHLLG L KS+K+DHFVSD
Sbjct: 355 THVIHHLFPQIPHYHLVEATEAAKPIIGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSD 414
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEADP L GQ
Sbjct: 415 TGDVVYYEADPKLSGQ 430
>gi|239809233|gb|ACS26171.1| chloroplast fatty acid desaturase 8 [Brassica
napus]
Length = 432
Score = 375 bits (962), Expect = 5e-102
Identities = 170/196 (86%), Positives = 178/196 (90%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGK GSH+ PDSDLFLP+E+ DV+TST CW AMAALLVCLNFVMGP+QMLKL
Sbjct: 235 PFYLWGRSPGKNGSHFDPDSDLFLPEEKKDVVTSTPCWIAMAALLVCLNFVMGPIQMLKL 294
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 295 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 354
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREP SGPLPLHLLG L KS+K+DHFVSD
Sbjct: 355 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKNSGPLPLHLLGSLIKSMKQDHFVSD 414
Query: 295 EGDVVYYEADPNLYGQ 248
GDVVYYEADP L GQ
Sbjct: 415 TGDVVYYEADPKLSGQ 430
>gi|255574784|ref|XP_002528299.1| Omega-3 fatty acid desaturase, chloroplast
precursor [Ricinus communis]
Length = 460
Score = 371 bits (950), Expect = 1e-100
Identities = 166/195 (85%), Positives = 178/195 (91%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW+RSPGKKGSH+HPDS LF+PKER D++TSTACWTAMAALLV LNF MGP+QMLKL
Sbjct: 259 PFYLWSRSPGKKGSHFHPDSGLFVPKERKDIITSTACWTAMAALLVYLNFSMGPVQMLKL 318
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLDFVTYLHHHGHEDKLPWYRGK WSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 319 YGIPYWIFVMWLDFVTYLHHHGHEDKLPWYRGKAWSYLRGGLTTLDRDYGWINNIHHDIG 378
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPV+GKYYREP KSGPLPLHLLG L +S+KEDH+VSD
Sbjct: 379 THVIHHLFPQIPHYHLVEATEAAKPVMGKYYREPKKSGPLPLHLLGSLVRSMKEDHYVSD 438
Query: 295 EGDVVYYEADPNLYG 251
GDVVYY+ DP L G
Sbjct: 439 TGDVVYYQKDPKLSG 453
>gi|224109306|ref|XP_002315154.1| predicted protein [Populus trichocarpa]
Length = 451
Score = 366 bits (939), Expect = 2e-099
Identities = 162/198 (81%), Positives = 178/198 (89%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
P LW+RSPGKKGSH+HPDSDLF P ER DV+TSTACWTAMAAL+ CL+FVMGP+QMLKL
Sbjct: 252 PVYLWSRSPGKKGSHFHPDSDLFAPNERKDVITSTACWTAMAALVACLSFVMGPVQMLKL 311
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLD VTYLHHHGH++KLPWYRGKEWSYLRGGLTTLDRDYG INNIHHDIG
Sbjct: 312 YGIPYWIFVMWLDLVTYLHHHGHDEKLPWYRGKEWSYLRGGLTTLDRDYGWINNIHHDIG 371
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPVLGKYYREP KSGPLP +LLG L +S+K+DH+VSD
Sbjct: 372 THVIHHLFPQIPHYHLVEATEAAKPVLGKYYREPKKSGPLPFYLLGTLIRSMKQDHYVSD 431
Query: 295 EGDVVYYEADPNLYGQIK 242
GDV+YY+ DP LYG K
Sbjct: 432 AGDVLYYQTDPKLYGPEK 449
>gi|91992438|gb|ABE72960.1| chloroplast omega-3 fatty acid desaturase [Jatropha
curcas]
Length = 455
Score = 365 bits (935), Expect = 7e-099
Identities = 160/195 (82%), Positives = 177/195 (90%)
Frame = -3
Query: 835 PFLLWARSPGKKGSHYHPDSDLFLPKERNDVLTSTACWTAMAALLVCLNFVMGPMQMLKL 656
PF LW RSPGKKGSH+HPDSDLF+P ER D++TSTACW+AMAALLV LNF++GP+QMLKL
Sbjct: 256 PFYLWGRSPGKKGSHFHPDSDLFVPNERKDIITSTACWSAMAALLVGLNFILGPIQMLKL 315
Query: 655 YVVPYWINVMWLDFVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTLDRDYGLINNIHHDIG 476
Y +PYWI VMWLD VTYLHHHGHEDKLPWYRGKEWSYLRGGLTT+DRDYG INNIHHDIG
Sbjct: 316 YGIPYWIFVMWLDLVTYLHHHGHEDKLPWYRGKEWSYLRGGLTTVDRDYGWINNIHHDIG 375
Query: 475 THVIHHLFPQIPHYHLAEATEAAKPVLGKYYREPDKSGPLPLHLLGILAKSIKEDHFVSD 296
THVIHHLFPQIPHYHL EATEAAKPV+GKYYREP SGPLP HLLG L +S+KEDH+VSD
Sbjct: 376 THVIHHLFPQIPHYHLIEATEAAKPVIGKYYREPRTSGPLPFHLLGSLVRSMKEDHYVSD 435
Query: 295 EGDVVYYEADPNLYG 251
GD+VYY+ DPN +G
Sbjct: 436 TGDIVYYQKDPNPWG 450
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,261,706,102,847
Number of Sequences: 15229318
Number of Extensions: 5261706102847
Number of Successful Extensions: 1224141854
Number of sequences better than 0.0: 0
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