BLASTX 7.6.2
Query= UN48968 /QuerySize=1050
(1049 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76940.1 | Symbols: | RNA recognition motif (... 231 5e-061
TAIR9_protein||AT1G21320.1 | Symbols: | nucleic acid binding / ... 200 2e-051
TAIR9_protein||AT1G21320.2 | Symbols: | nucleic acid binding / ... 200 2e-051
>TAIR9_protein||AT1G76940.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28902707-28904085 REVERSE
Length = 234
Score = 231 bits (589), Expect = 5e-061
Identities = 132/229 (57%), Positives = 148/229 (64%), Gaps = 26/229 (11%)
Frame = -2
Query: 964 MADGYRDQPPMSSIPHGGPLKRHRSDFD-----------HDYVSRDEDRGILHSVRDTRT 818
MADGY +Q P GGP+KR RSDF+ Y RDED V DTRT
Sbjct: 1 MADGYWNQQRQQHHPPGGPMKRPRSDFEAPSSTMTIGHGGGYYPRDEDL----DVPDTRT 56
Query: 817 IGSAYDRYLQSAQTSSRPSEESGRFHGVGRGG-----DMGELMSGRGGVQHPDFGPPNGR 653
IGSAYDRYLQS Q+ S GR G G GG + + M RGGV D G PNG
Sbjct: 57 IGSAYDRYLQSVQSGEGGSVSMGRSGGGGGGGGGNVQTIDDFMLRRGGVLPLDHG-PNGH 115
Query: 652 DLGFGQQDLVGRPGRELLRLPPDASNTLFVEGLPSNCSRREVSHIFRPFLGYKEARLVTK 473
+GF + VGR LP DASNTL+VEGLPSNCSRREV+HIFRPF+GY+E RLVTK
Sbjct: 116 TIGFDPPEPVGR-----RNLPSDASNTLYVEGLPSNCSRREVAHIFRPFVGYREVRLVTK 170
Query: 472 DTKQRNGDPVVLCFVDFESPACAATARTALQGYRMDENEPDSKICRSSF 326
D+K RNGDP+VLCFVDF +PACAATA +ALQGYRMDENE DSK R F
Sbjct: 171 DSKHRNGDPIVLCFVDFTNPACAATALSALQGYRMDENESDSKFLRLQF 219
>TAIR9_protein||AT1G21320.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:7462834-7465200 REVERSE
Length = 422
Score = 200 bits (507), Expect = 2e-051
Identities = 99/134 (73%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
Frame = -2
Query: 727 GGDMGELMSGRGGVQHPDFGPPNGRDLGFGQQDLVGRPGRELLRLPPDASNTLFVEGLPS 548
G MGELM+G GG DF PNGRD+GFGQ D VGRPGRE LPPD SNTL+VEGLPS
Sbjct: 274 GPSMGELMAGCGGSLPSDF-RPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPS 332
Query: 547 NCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVLCFVDFESPACAATARTALQGYRM 368
NCSRREVSHIFRPF+GY+E RLVT+D+K R+GDP VLCFVDFE+ ACAATA +ALQ YRM
Sbjct: 333 NCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRM 392
Query: 367 DENEPDSKICRSSF 326
DE+EPDSKI R F
Sbjct: 393 DEDEPDSKILRLQF 406
Score = 79 bits (192), Expect = 6e-015
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -2
Query: 880 HDYVSRDEDRGILHSVRDTRTIGSAYDRYLQSAQTSSRPSEESGRFHGVG 731
H Y+S+DEDRGI HSV+DTR+IGSAYDRYLQS QT PSEE+G F+GVG
Sbjct: 213 HSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVG 262
>TAIR9_protein||AT1G21320.2 | Symbols: | nucleic acid binding / nucleotide
binding | chr1:7462834-7466164 REVERSE
Length = 254
Score = 200 bits (507), Expect = 2e-051
Identities = 99/134 (73%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
Frame = -2
Query: 727 GGDMGELMSGRGGVQHPDFGPPNGRDLGFGQQDLVGRPGRELLRLPPDASNTLFVEGLPS 548
G MGELM+G GG DF PNGRD+GFGQ D VGRPGRE LPPD SNTL+VEGLPS
Sbjct: 106 GPSMGELMAGCGGSLPSDF-RPNGRDMGFGQLDSVGRPGREPHPLPPDVSNTLYVEGLPS 164
Query: 547 NCSRREVSHIFRPFLGYKEARLVTKDTKQRNGDPVVLCFVDFESPACAATARTALQGYRM 368
NCSRREVSHIFRPF+GY+E RLVT+D+K R+GDP VLCFVDFE+ ACAATA +ALQ YRM
Sbjct: 165 NCSRREVSHIFRPFVGYREVRLVTQDSKHRSGDPTVLCFVDFENSACAATALSALQDYRM 224
Query: 367 DENEPDSKICRSSF 326
DE+EPDSKI R F
Sbjct: 225 DEDEPDSKILRLQF 238
Score = 79 bits (192), Expect = 6e-015
Identities = 37/50 (74%), Positives = 43/50 (86%)
Frame = -2
Query: 880 HDYVSRDEDRGILHSVRDTRTIGSAYDRYLQSAQTSSRPSEESGRFHGVG 731
H Y+S+DEDRGI HSV+DTR+IGSAYDRYLQS QT PSEE+G F+GVG
Sbjct: 45 HSYLSQDEDRGIPHSVKDTRSIGSAYDRYLQSMQTFFVPSEEAGPFNGVG 94
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,348,893,287
Number of Sequences: 33410
Number of Extensions: 23348893287
Number of Successful Extensions: 739668173
Number of sequences better than 0.0: 0
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