BLASTX 7.6.2
Query= UN49060 /QuerySize=1107
(1106 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23540.1 | Symbols: | 26S proteasome regulato... 396 1e-110
TAIR9_protein||AT5G23540.2 | Symbols: | 26S proteasome regulato... 300 1e-081
TAIR9_protein||AT1G71230.1 | Symbols: CSN5B, CSN5, AJH2 | CSN5B ... 122 5e-028
TAIR9_protein||AT1G22920.1 | Symbols: CSN5A, JAB1, AJH1 | CSN5A ... 121 1e-027
TAIR9_protein||AT1G22920.2 | Symbols: CSN5A, JAB1, AJH1 | CSN5A ... 121 1e-027
>TAIR9_protein||AT5G23540.1 | Symbols: | 26S proteasome regulatory subunit,
putative | chr5:7937772-7939339 FORWARD
Length = 309
Score = 396 bits (1017), Expect = 1e-110
Identities = 197/197 (100%)
Frame = +1
Query: 70 MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 249
MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF
Sbjct: 1 MERLQRIFGAGGGLGHASPDSPTLDTSEQVYISSLALLKMLKHGRAGVPMEVMGLMLGEF 60
Query: 250 VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 429
VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW
Sbjct: 61 VDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVGWYHSHPGFGCW 120
Query: 430 LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL 609
LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL
Sbjct: 121 LSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIMLGQEPRQTTSNL 180
Query: 610 GHLNKPSIQALIHGLNR 660
GHLNKPSIQALIHGLNR
Sbjct: 181 GHLNKPSIQALIHGLNR 197
Score = 118 bits (294), Expect = 9e-027
Identities = 65/87 (74%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Frame = +1
Query: 658 RWSDAKTL*HPLQDKRTDGSGNVE---LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH 828
+W+D TL +T+ E LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH
Sbjct: 223 KWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH 282
Query: 829 LEEHVSNLMSSNIVQTLGTMLDTVVF* 909
LEEHVSNLMSSNIVQTLGTMLDTVVF*
Sbjct: 283 LEEHVSNLMSSNIVQTLGTMLDTVVF* 309
Score = 52 bits (124), Expect = 5e-007
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 656 TDGLTLRRFDTHSKTNEQTVQEMLN 730
TDGLTLRRFDTHSKTNEQTVQEML+
Sbjct: 225 TDGLTLRRFDTHSKTNEQTVQEMLS 249
>TAIR9_protein||AT5G23540.2 | Symbols: | 26S proteasome regulatory subunit,
putative | chr5:7938109-7939339 FORWARD
Length = 260
Score = 300 bits (768), Expect = 1e-081
Identities = 148/148 (100%)
Frame = +1
Query: 217 MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 396
MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG
Sbjct: 1 MEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVDHVFQTNMLDMLKQTGRPEMVVG 60
Query: 397 WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML 576
WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML
Sbjct: 61 WYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVDPIQSVKGKVVIDAFRSINPQTIML 120
Query: 577 GQEPRQTTSNLGHLNKPSIQALIHGLNR 660
GQEPRQTTSNLGHLNKPSIQALIHGLNR
Sbjct: 121 GQEPRQTTSNLGHLNKPSIQALIHGLNR 148
Score = 118 bits (294), Expect = 9e-027
Identities = 65/87 (74%), Positives = 69/87 (79%), Gaps = 3/87 (3%)
Frame = +1
Query: 658 RWSDAKTL*HPLQDKRTDGSGNVE---LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH 828
+W+D TL +T+ E LAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH
Sbjct: 174 KWTDGLTLRRFDTHSKTNEQTVQEMLSLAAKYNKAVQEEDELSPEKLAIVNVGRQDAKKH 233
Query: 829 LEEHVSNLMSSNIVQTLGTMLDTVVF* 909
LEEHVSNLMSSNIVQTLGTMLDTVVF*
Sbjct: 234 LEEHVSNLMSSNIVQTLGTMLDTVVF* 260
Score = 52 bits (124), Expect = 5e-007
Identities = 24/25 (96%), Positives = 25/25 (100%)
Frame = +2
Query: 656 TDGLTLRRFDTHSKTNEQTVQEMLN 730
TDGLTLRRFDTHSKTNEQTVQEML+
Sbjct: 176 TDGLTLRRFDTHSKTNEQTVQEMLS 200
>TAIR9_protein||AT1G71230.1 | Symbols: CSN5B, CSN5, AJH2 | CSN5B
(COP9-SIGNALOSOME 5B); protein binding | chr1:26852560-26854255
FORWARD
Length = 359
Score = 122 bits (305), Expect = 5e-028
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 4/137 (2%)
Frame = +1
Query: 151 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 330
++V IS+LALLKM+ H R+G +E+MGLM G+ D T+ V+D FA+P GT V A D
Sbjct: 57 KRVKISALALLKMVVHARSGGTIEIMGLMQGK-TDGDTIIVMDAFALPVEGTETRVNAQD 115
Query: 331 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 504
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ+ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTNKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQRLNQQHQEPFLAVVID 175
Query: 505 PIQSVK-GKVVIDAFRS 552
P ++V GKV I AFR+
Sbjct: 176 PTRTVSAGKVEIGAFRT 192
>TAIR9_protein||AT1G22920.1 | Symbols: CSN5A, JAB1, AJH1 | CSN5A (COP9
SIGNALOSOME 5A) | chr1:8109882-8111895 REVERSE
Length = 358
Score = 121 bits (301), Expect = 1e-027
Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 4/137 (2%)
Frame = +1
Query: 151 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 330
++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D FA+P GT V A
Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGK-TEGDTIIVMDAFALPVEGTETRVNAQS 115
Query: 331 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 504
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 505 PIQSVK-GKVVIDAFRS 552
P ++V GKV I AFR+
Sbjct: 176 PTRTVSAGKVEIGAFRT 192
>TAIR9_protein||AT1G22920.2 | Symbols: CSN5A, JAB1, AJH1 | CSN5A (COP9
SIGNALOSOME 5A) | chr1:8109998-8111895 REVERSE
Length = 352
Score = 121 bits (301), Expect = 1e-027
Identities = 64/137 (46%), Positives = 90/137 (65%), Gaps = 4/137 (2%)
Frame = +1
Query: 151 EQVYISSLALLKMLKHGRAGVPMEVMGLMLGEFVDEYTVRVVDVFAMPQSGTGVSVEAVD 330
++V+IS+LALLKM+ H R+G +E+MGLM G+ + T+ V+D FA+P GT V A
Sbjct: 57 KRVHISALALLKMVVHARSGGTIEIMGLMQGK-TEGDTIIVMDAFALPVEGTETRVNAQS 115
Query: 331 HVFQ--TNMLDMLKQTGRPEMVVGWYHSHPGFGCWLSGVDINTQQSFEALNQRAVAVVVD 504
++ K GR E VVGWYHSHPG+GCWLSG+D++TQ + + +AVV+D
Sbjct: 116 DAYEYMVEYSQTSKLAGRLENVVGWYHSHPGYGCWLSGIDVSTQMLNQQYQEPFLAVVID 175
Query: 505 PIQSVK-GKVVIDAFRS 552
P ++V GKV I AFR+
Sbjct: 176 PTRTVSAGKVEIGAFRT 192
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,392,496,366
Number of Sequences: 33410
Number of Extensions: 23392496366
Number of Successful Extensions: 739726773
Number of sequences better than 0.0: 0
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