BLASTX 7.6.2
Query= UN49070 /QuerySize=1151
(1150 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT... 468 1e-129
gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 ... 462 7e-128
gi|83032218|gb|ABB97027.1| unknown [Brassica rapa] 319 7e-085
gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 ... 270 4e-070
gi|225457213|ref|XP_002284026.1| PREDICTED: hypothetical protein... 257 3e-066
gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 ... 251 2e-064
gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT... 245 1e-062
gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protei... 232 9e-059
gi|224121390|ref|XP_002318570.1| predicted protein [Populus tric... 223 4e-056
gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa] 219 8e-055
gi|255645506|gb|ACU23248.1| unknown [Glycine max] 214 3e-053
gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protei... 208 1e-051
gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vini... 201 2e-049
gi|224130158|ref|XP_002328668.1| predicted protein [Populus tric... 162 1e-037
gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocysti... 154 2e-035
gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ecto... 136 1e-029
gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni] 131 3e-028
gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophtho... 124 3e-026
gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprot... 120 7e-025
gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprote... 120 7e-025
>gi|297839301|ref|XP_002887532.1| hypothetical protein ARALYDRAFT_476560
[Arabidopsis lyrata subsp. lyrata]
Length = 292
Score = 468 bits (1203), Expect = 1e-129
Identities = 241/296 (81%), Positives = 252/296 (85%), Gaps = 22/296 (7%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTHVAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 264
MAFLSKVG+IF QTS+HV AS+SMLQ IRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV
Sbjct: 1 MAFLSKVGRIFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60
Query: 265 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 444
VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG
Sbjct: 61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 120
Query: 445 FGGPGGG----------NAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNA- 591
FGGPGGG AGGYGAP+GGYGG YGG AG GGYGG SSYGGNA
Sbjct: 121 FGGPGGGYGASDGGYGAPAGGYGAPAGGYGGNSSYGGNAGG----GGGYGGNSSYGGNAG 176
Query: 592 -GGGYGGNSPYGGNSV--GDGYGSNV--GGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSS 756
GGGYGGN PY GN+V G GYGSN+ GGGYGVAGGVGGSDNFAQGSSSNAGFD+KF S
Sbjct: 177 GGGGYGGNPPYTGNAVGGGGGYGSNLGSGGGYGVAGGVGGSDNFAQGSSSNAGFDNKFGS 236
Query: 757 NEPLGNDTDHQLES--ASDEQFGGSDNQFGGSENGQTEIAPDGFDQPDDSDVAKRA 918
N+PLGNDTDHQL+S DEQFGGSDNQFG +ENG+TE PDGFDQ DD DVAKRA
Sbjct: 237 NQPLGNDTDHQLDSGFGGDEQFGGSDNQFGDAENGKTENGPDGFDQTDDGDVAKRA 292
>gi|15221187|ref|NP_177563.1| glycine-rich RNA-binding protein 5 [Arabidopsis
thaliana]
Length = 289
Score = 462 bits (1187), Expect = 7e-128
Identities = 238/290 (82%), Positives = 249/290 (85%), Gaps = 13/290 (4%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTHVAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 264
MAFLSKVG++F QTS+HV AS+SMLQ IRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV
Sbjct: 1 MAFLSKVGRLFSQTSSHVTASSSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60
Query: 265 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 444
VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG
Sbjct: 61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 120
Query: 445 FGGPGGG---NAGGYGAPSGGYGGGGGYGGGAGSYGAPA---GGYGGGSSYGGNAGGGYG 606
FGGPGGG + GGYGAP+GGYGGG G GG SY A GGYGG SSYGGNA GGYG
Sbjct: 121 FGGPGGGYGASDGGYGAPAGGYGGGAGGYGGNSSYSGNAGGGGGYGGNSSYGGNA-GGYG 179
Query: 607 GNSPYGGNSV--GDGYGSNV--GGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSSNEPLGN 774
GN PY GN+V G GYGSN GGGYGVAGGVGGS+NFAQGSS+NAGFDDKF SN+PLGN
Sbjct: 180 GNPPYSGNAVGGGGGYGSNFGGGGGYGVAGGVGGSENFAQGSSTNAGFDDKFESNQPLGN 239
Query: 775 DTDHQLES--ASDEQFGGSDNQFGGSENGQTEIAPDGFDQPDDSDVAKRA 918
DTDHQ ES DEQFGGSDNQFG +ENG TE P GFDQ DD DVAKRA
Sbjct: 240 DTDHQTESGLGGDEQFGGSDNQFGDAENGNTENGPVGFDQTDDGDVAKRA 289
>gi|83032218|gb|ABB97027.1| unknown [Brassica rapa]
Length = 208
Score = 319 bits (816), Expect = 7e-085
Identities = 155/160 (96%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTHVAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 264
MAFLSKVGKIFRQTS HV ASNSMLQ IRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV
Sbjct: 1 MAFLSKVGKIFRQTSAHVTASNSMLQSIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 60
Query: 265 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 444
VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG
Sbjct: 61 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLDGQDLHGRRIRVNYATERGSGFGGRG 120
Query: 445 FGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYG 564
FGGPGGGNAGGYGAPSGGYGGGGGYGGGAG YGAP GGYG
Sbjct: 121 FGGPGGGNAGGYGAPSGGYGGGGGYGGGAGGYGAPGGGYG 160
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis
thaliana]
Length = 309
Score = 270 bits (689), Expect = 4e-070
Identities = 149/274 (54%), Positives = 187/274 (68%), Gaps = 29/274 (10%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTH------VAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFLSK G I +QT+ +S S+ Q IRCMSSSK+F+GG++YS DE LREAF
Sbjct: 1 MAFLSKFGNILKQTTNKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER- 420
+KYGEVVD ++I+DRETGRSRGF FVTFTS+E AS+A+Q LDG+DLHGR ++VNYA +R
Sbjct: 61 TKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 421 -GSGFGGRGFGGPGG--GNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNA 591
G GFGG G+GG GG G +GGYG +GGYGG GGYGGGAG YG +GG YGGNA
Sbjct: 121 SGGGFGGGGYGGGGGGYGGSGGYGGGAGGYGGSGGYGGGAGGYGGNSGG-----GYGGNA 175
Query: 592 GGGYGGNSP--YGGNSVGDGYGSNVGGGYGVAGGVGGSDN-FAQGSSSNAGFDDKFSSNE 762
GGYGG+ YGG++ G G GGGYG +GG G S N + +GSS++AG ++ +
Sbjct: 176 AGGYGGSGAGGYGGDATGHG---GAGGGYGSSGGFGSSGNTYGEGSSASAGAVGDYNGSS 232
Query: 763 PLGNDTDHQLES---ASDEQFGGS----DNQFGG 843
G+ + + A D QFGGS +QFGG
Sbjct: 233 GYGSANTYGSSNGGFAGDSQFGGSPVGNSSQFGG 266
>gi|225457213|ref|XP_002284026.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 257 bits (655), Expect = 3e-066
Identities = 152/282 (53%), Positives = 182/282 (64%), Gaps = 22/282 (7%)
Frame = +1
Query: 85 MAFLSKVGKIFRQT-----STHVAASN-SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAF KVG I RQT ++ + SN S+ Q IRCMSSSK+F+GG+SYSTD+ LREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATE-- 417
KYGEV++A++IVDRETGRSRGF FVTFTS+EEAS+A+Q LDGQDLHGRR+RVNYAT+
Sbjct: 61 HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
Query: 418 RGSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNAGG 597
R GFGG G G GGG GG G GGYGG GGYGG G YG +GGYGGG G+ GG
Sbjct: 121 RSGGFGGGGGYGGGGGGYGGGGYGGGGYGGSGGYGG--GGYGGGSGGYGGGGDSYGSGGG 178
Query: 598 GYG-GNSPYGGNSVGDGYGSNVGGGYGVAGGVGGSDNFAQGSS-SNAGFDDKFSSNEPLG 771
YG G YGG+S GYGS GG + VA GGSDN+ G++ S++GF S+ G
Sbjct: 179 NYGSGGGGYGGSS--GGYGS--GGNFSVA---GGSDNYVGGAAGSSSGFPSGGGSSFASG 231
Query: 772 NDTDHQLESASDEQFGGSDNQFGGSENGQTEIAPDGFDQPDD 897
QL + G +F E D D+PDD
Sbjct: 232 G--ADQLGTNESSSVGDGAGEFSPDEPATEGNYRDDDDEPDD 271
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis
vinifera]
Length = 272
Score = 251 bits (639), Expect = 2e-064
Identities = 144/265 (54%), Positives = 171/265 (64%), Gaps = 20/265 (7%)
Frame = +1
Query: 85 MAFLSKVGKIFRQT-----STHVAASN-SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAF KVG I RQT ++ + SN S+ Q IRCMSSSK+F+GG+SYSTD+ LREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATE-- 417
KYGEV++A++IVDRETGRSRGF FVTFTS+EEAS+A+Q LDGQDLHGRR+RVNYAT+
Sbjct: 61 YKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
Query: 418 RGSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNAGG 597
R GFGG G G GGG GG G GGYGG GGYGG G YG +GGYGGG G+ GG
Sbjct: 121 RSGGFGGGGGYGGGGGGYGGGGYGGGGYGGSGGYGG--GGYGGGSGGYGGGGDSYGSGGG 178
Query: 598 GYG-GNSPYGGNSVGDGYGSNVGGGYGVAGG----VGGSDNFAQGSSSNAGFDDKFSSNE 762
YG G YGG+S GYGS GG + VAGG VGG+ + G S G +
Sbjct: 179 NYGSGGGGYGGSS--GGYGS--GGNFSVAGGSDNYVGGAAGSSSGFPSGGGSSFASGGAD 234
Query: 763 PLGNDTDHQLESASDEQFGGSDNQF 837
LG + + S + G F
Sbjct: 235 QLGTNESSSVSSVLNNXAGAXKXIF 259
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310
[Arabidopsis lyrata subsp. lyrata]
Length = 327
Score = 245 bits (624), Expect = 1e-062
Identities = 148/276 (53%), Positives = 179/276 (64%), Gaps = 32/276 (11%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTH------VAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFLSK G I +QT++ +S S+ Q IRCMSSSK+F+GG++YS DE LREAF
Sbjct: 1 MAFLSKFGNILKQTTSKQLNAQVSLSSPSLFQAIRCMSSSKLFIGGMAYSMDEDSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER- 420
+KYGEVV+ ++I+DRETGRSRGF FVTFTS+E AS+A+Q LDG+DLHGR ++VNYA +R
Sbjct: 61 TKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKVNYANDRT 120
Query: 421 -GSGFGGRGFGGPGGGNAGGYGAPSGGYGGG--GGYGGGAGSYGAPA-GGYG-GGSSYGG 585
G GFGG G+GG GGG GG GGYGGG GGYGGGAG YG A GGYG G YGG
Sbjct: 121 SGGGFGGGGYGGGGGGYGGG-----GGYGGGTAGGYGGGAGGYGGNAGGGYGDGAGGYGG 175
Query: 586 NAGGGYGGNS--PYGGNSVGDGYGSNVGGGY-GVAGGVGGSDNFAQGSSSNAGFDDKFSS 756
AGGGYGGN+ YGG+ G GYG + GGY G A G GG + G+SS G SS
Sbjct: 176 IAGGGYGGNAGGGYGGSGAG-GYGGSGAGGYGGDATGHGGGGGY--GASSGFG-----SS 227
Query: 757 NEPLGNDTDHQLESA---SDEQFGGSDNQFGGSENG 855
G + + + GS N +G S G
Sbjct: 228 GNTYGEGSSASAGAVGVYNGSSGYGSANTYGSSNGG 263
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative
[Ricinus communis]
Length = 267
Score = 232 bits (591), Expect = 9e-059
Identities = 136/259 (52%), Positives = 167/259 (64%), Gaps = 23/259 (8%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTH------VAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFLSKVG + RQT+T A+ SM Q IR MSSSK+FVGGISY TD+ LREAF
Sbjct: 1 MAFLSKVGNLLRQTATKQISNELSASRPSMFQAIRFMSSSKVFVGGISYQTDDTSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER- 420
KYGEV++A++I+DRETGRSRGFAFVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYA +R
Sbjct: 61 GKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNYANDRP 120
Query: 421 GSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGG----YGGGSSYGGN 588
+ FGG G+GG GGYGA GGY GGGYG G G+YG GG YG ++ GG
Sbjct: 121 RTSFGGGGYGG------GGYGAGGGGYSSGGGYGAGGGAYGGNYGGTGGNYGDSNTSGGG 174
Query: 589 AGGGYGGNSPYGGNSVGDGYGSNV--GGGYGVAGGVGGSDNFAQGSSSNA-GFDDKFSSN 759
GY + +G S G YGS+ GV G ++ F GS A G D F +N
Sbjct: 175 DDVGYASGNSFGSASTGT-YGSDTWNDASGGVNPASGNTNEFGGGSYGAAGGADGNFGAN 233
Query: 760 EPLGNDTDHQLESASDEQF 816
+ G+ + L+ AS E F
Sbjct: 234 DGFGDREGNSLD-ASPEGF 251
>gi|224121390|ref|XP_002318570.1| predicted protein [Populus trichocarpa]
Length = 255
Score = 223 bits (568), Expect = 4e-056
Identities = 134/256 (52%), Positives = 165/256 (64%), Gaps = 35/256 (13%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTHVAASN------SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFL+K+G + RQT++ AS S+ Q +RCMSSSK+FVGGIS+ TD+ L+EAF
Sbjct: 1 MAFLTKMGNMLRQTASRQMASEISASRPSIYQAMRCMSSSKLFVGGISFQTDDNSLKEAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERG 423
KYG VV+A+II+DRETGRSRGF FVT+TS+EEAS+A+Q LDGQDLHGRR+RVNYATER
Sbjct: 61 DKYGNVVEARIIMDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNYATERP 120
Query: 424 SGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNAGGGY 603
+G GGGN G GGYG GGGY GYG G YG N GG +
Sbjct: 121 QRTFNNNYGSYGGGNYG------GGYGTGGGY------------GYGTGGGYGTNDGGNH 162
Query: 604 GG-NSPYGGNSVGDGYGSNV--GGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSSNEPLGN 774
GG N+ YGGN G+ N GG G+AGGVGGSD++ S+NA D + N LG
Sbjct: 163 GGRNATYGGND-GNYAVQNTFDGGAGGIAGGVGGSDSYV---STNA--DGGYDGNAGLGY 216
Query: 775 DTDHQLESASDEQFGG 822
+ +Q A+D GG
Sbjct: 217 GSGNQF-GANDSSGGG 231
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 219 bits (557), Expect = 8e-055
Identities = 121/242 (50%), Positives = 158/242 (65%), Gaps = 18/242 (7%)
Frame = +1
Query: 85 MAFLSKVGKIFRQT-----STHVAASN-SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFL+K+G + RQT ++ ++AS S+ Q +RCMSSSKIF+GGIS+ TD+ GL+EAF
Sbjct: 1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATER- 420
KYG VV+A+II+DR+TGRSRGF FVT+TS+EEAS+A+Q +DGQDLHGRR+RVNYATER
Sbjct: 61 DKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERP 120
Query: 421 ----GSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGN 588
+ +G G GG GGG GGYG GGYG GGGYG +Y + GG +YG
Sbjct: 121 QRTFNNNYGNYGGGGYGGG-GGGYGGGGGGYGTGGGYG---SNYAGQSTYDGGAGNYGAA 176
Query: 589 AGGGYGGNSPYGGNSVGDGYGSNVGGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSSNEPL 768
AGG G + Y SV GY N G GYG G +++ G + + D ++
Sbjct: 177 AGG--GRSDGYTNTSVDGGYDGNAGLGYGGGNQFGANESSGDGLNLDDALDKNSKEDDDA 234
Query: 769 GN 774
G+
Sbjct: 235 GD 236
>gi|255645506|gb|ACU23248.1| unknown [Glycine max]
Length = 243
Score = 214 bits (543), Expect = 3e-053
Identities = 124/244 (50%), Positives = 157/244 (64%), Gaps = 23/244 (9%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTST-HV-----AASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFL+K+G + + ++ H+ A++ S+ Q IR MSS+K+FVGGISYSTD+ LRE+F
Sbjct: 1 MAFLNKIGNLLKNSAVKHINQDFSASTPSLFQAIRSMSSAKLFVGGISYSTDDMSLRESF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERG 423
++YGEV+D K+I+DRETGRSRGF FVTF ++E+AS+A+Q +DGQDLHGRRIRVNYATER
Sbjct: 61 ARYGEVIDVKVIMDRETGRSRGFGFVTFATSEDASSAIQGMDGQDLHGRRIRVNYATERS 120
Query: 424 -SGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGG----AGSYGAPAGGYGGGSSY-GG 585
GFGG G G GGG G G YG GGGYGGG G+YG +GGY SSY GG
Sbjct: 121 RPGFGGDGGYGSGGGGYNG----GGNYGSGGGYGGGGYNRGGNYG--SGGYNVTSSYSGG 174
Query: 586 NAGGGYGGNSPYGGNSVGDGYGSNVGGGYGVAGGVGGSDNFAQGSSSNAGFDDKFSSNEP 765
NA Y G GGN+ + N GG +G A G S+ + N F + N
Sbjct: 175 NAETSYTG----GGNASNYQFNENSGGDFGSASGEFSSNQNDTAGADNDEFIEPLEDNVR 230
Query: 766 LGND 777
ND
Sbjct: 231 ENND 234
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 208 bits (529), Expect = 1e-051
Identities = 113/228 (49%), Positives = 146/228 (64%), Gaps = 17/228 (7%)
Frame = +1
Query: 85 MAFLSKVGKIFRQTSTHVAASNSMLQGIRCMSSSKIFVGGISYSTDEFGLREAFSKYGEV 264
M +K+G + + ++ +++ S+ Q IRCMSSSK+FVGG+SY TD+ LR+ F+KYG+V
Sbjct: 1 MMLANKLGGLLKNATSSKSSNMSVYQAIRCMSSSKLFVGGLSYGTDDHSLRDEFAKYGQV 60
Query: 265 VDAKIIVDRETGRSRGFAFVTFTSTEEASNAM-QLDGQDLHGRRIRVNYATERGSGFGGR 441
++AKII+DRE+GRSRGF F+T+TS+EEAS A+ +DG+ L GR IRVN+A ER GF
Sbjct: 61 IEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNHANERTGGFRSS 120
Query: 442 GFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGAPAGGYGGGSSYGGNAGGGYGGNSPY 621
G G GGG GGYG SGGYG GGG+G YG +GGYGG +YG AGGGYGG Y
Sbjct: 121 GGGYGGGGYGGGYGGGSGGYG-----GGGSGDYGGGSGGYGG--NYGNRAGGGYGGGGDY 173
Query: 622 G--GNSVG-------DGYGSNVGGGYGVAGGVGGSDNFAQGSSSNAGF 738
G G + G D +GS+ G GS GSS GF
Sbjct: 174 GVAGGAEGSFAAGGSDSFGSSNFADSGFGENPAGSFGATGGSSGADGF 221
>gi|297733872|emb|CBI15119.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 201 bits (510), Expect = 2e-049
Identities = 105/157 (66%), Positives = 122/157 (77%), Gaps = 9/157 (5%)
Frame = +1
Query: 85 MAFLSKVGKIFRQT-----STHVAASN-SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAF KVG I RQT ++ + SN S+ Q IRCMSSSK+F+GG+SYSTD+ LREAF
Sbjct: 1 MAFFGKVGNILRQTVSKQVNSQFSVSNPSIYQAIRCMSSSKLFIGGLSYSTDDTSLREAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATE-- 417
KYGEV++A++IVDRETGRSRGF FVTFTS+EEAS+A+Q LDGQDLHGRR+RVNYAT+
Sbjct: 61 HKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNYATDRA 120
Query: 418 RGSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGG 528
R GFGG G G GGG GG G GGYGG GGYGGG
Sbjct: 121 RSGGFGGGGGYGGGGGGYGGGGYGGGGYGGSGGYGGG 157
>gi|224130158|ref|XP_002328668.1| predicted protein [Populus trichocarpa]
Length = 142
Score = 162 bits (408), Expect = 1e-037
Identities = 84/140 (60%), Positives = 107/140 (76%), Gaps = 7/140 (5%)
Frame = +1
Query: 85 MAFLSKVGKIFRQT-----STHVAASN-SMLQGIRCMSSSKIFVGGISYSTDEFGLREAF 246
MAFL+K+G + RQT ++ ++AS S+ Q +RCMSSSKIF+GGIS+ TD+ GL+EAF
Sbjct: 1 MAFLTKLGNMLRQTANRQITSEISASRPSIYQALRCMSSSKIFIGGISFQTDDNGLKEAF 60
Query: 247 SKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ-LDGQDLHGRRIRVNYATERG 423
KYG VV+ II+DR+TGRSRGF FVT+TS+EEAS+A+Q +DGQDLHGRR+RVNYATER
Sbjct: 61 DKYGNVVEGIIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNYATERP 120
Query: 424 SGFGGRGFGGPGGGNAGGYG 483
+G GGG GG G
Sbjct: 121 QRTFNNNYGNYGGGGYGGGG 140
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica
SIR-1]
Length = 189
Score = 154 bits (389), Expect = 2e-035
Identities = 91/192 (47%), Positives = 111/192 (57%), Gaps = 11/192 (5%)
Frame = +1
Query: 190 IFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQLD 369
+FVGG+ ++ D L+E F+++G + DA++I+DRETGRSRGF FVT+ E A+ A+ LD
Sbjct: 1 MFVGGLPWAMDNQRLKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKALGLD 60
Query: 370 GQDLHGRRIRVNYATE---RGSGFG---GRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGA 531
GQ++ GRRIRV+ A E RG G G G G GGP GG GG G GGYGGGGG GGG
Sbjct: 61 GQEVDGRRIRVDRAQEKERRGGGRGPRPGGGGGGPRGGGGGGGGGGRGGYGGGGG-GGGR 119
Query: 532 GSYGAPAGGYGGGSSYGGNAGGGYGGNSPYGGNSVGDGYGSNVGGGYGVAGGVGGSDNFA 711
G YG GG GGG G + G N GG G G G G G GG D F
Sbjct: 120 GGYGGGGGGGGGG---GFDDWGKDRRNDRDGGGGRGKGKGGRGRRRGGRGGRGGGGDGFG 176
Query: 712 QGS-SSNAGFDD 744
G G+DD
Sbjct: 177 GGGFGGGGGYDD 188
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus
siliculosus]
Length = 462
Score = 136 bits (340), Expect = 1e-029
Identities = 77/190 (40%), Positives = 100/190 (52%), Gaps = 14/190 (7%)
Frame = +1
Query: 181 SSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAM 360
++KIFVGG+ ++ R F+K+G+V DA ++ D++TGRSRGF F+T+ S + M
Sbjct: 174 TNKIFVGGLDQEVNDADFRGYFAKFGKVEDAVVMYDKKTGRSRGFGFITYDSPDIVRKVM 233
Query: 361 QLDGQDLHGRRIRVNYATERGSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSY 540
+L G+ + V A R G R F G GG N GGYG GGYGGG G GGG G
Sbjct: 234 SGGTHELKGKSVEVKTAAPRD---GPRQFNGGGGFNGGGYGG-GGGYGGGYGGGGGGGYG 289
Query: 541 GAPAGGYGGGSSYGGNAGG--GYGGNSPYGGNSVGDGYGSNVGGGYG------VAGGVGG 696
G GG YGG GG GYGG Y GYG GGGYG +GG
Sbjct: 290 GQQGWSQQGGGGYGGGYGGQQGYGGG--YNQQQQQGGYGGGYGGGYGQQDQSYASGGYNQ 347
Query: 697 SDNFAQGSSS 726
+ QG+++
Sbjct: 348 QQGYGQGAAT 357
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 131 bits (328), Expect = 3e-028
Identities = 84/228 (36%), Positives = 109/228 (47%), Gaps = 14/228 (6%)
Frame = +1
Query: 187 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 366
K+FVG + DE LR+ FS +G +VD I++D+ETG+ RGFAFV F + +
Sbjct: 122 KLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQ 181
Query: 367 DGQDLHGRRIRVNYATERGSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGSYGA 546
L+G+ + V A + + GG GG GGG G A G G G GGG G YG
Sbjct: 182 KQHQLNGKMVDVKKALPKQNDMGG---GGGGGGRGPGGRAGGGNRGNNMGGGGGGGGYGN 238
Query: 547 PAGGYGGGSSYGGNAGGGYGGNSPYGGNSVGDGYGSNVGGGYGVAGGVGGSDNFAQGS-- 720
G GG + GGN G GGN +G NS G G G GGGYG GG GG +N +
Sbjct: 239 QNG--GGNWNGGGNWGNNRGGNDNWGNNSYGGGGGG--GGGYGSGGGGGGGNNCWGNNMG 294
Query: 721 --SSNAGFDDKFSSNEPLGNDTDHQLESASDEQFGGSDNQF-GGSENG 855
+ +G F GN +D FGG + GG + G
Sbjct: 295 PWDNGSGGSGNFGGGGGGGNSNWGGNNGGND--FGGYQQSYSGGPQRG 340
>gi|301119623|ref|XP_002907539.1| nucleolin, putative [Phytophthora infestans
T30-4]
Length = 496
Score = 124 bits (310), Expect = 3e-026
Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 7/147 (4%)
Frame = +1
Query: 184 SKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQ 363
+ +F+G +S+ DE +RE F + GE++ ++ DRETG RGF V F STE A++
Sbjct: 336 TSVFIGNLSWDVDENTVRETFGECGEILSCRLATDRETGEFRGFGHVDFASTEAVDEAVK 395
Query: 364 LDGQDLHGRRIRVNYATER-GSGFGGR-GFGGPGGGNAGGYGAPSGGYGGGGGYGGGAGS 537
L G ++GR IRVNYA R +G GGR GFGG GGG G G GG+ GG G+GG G
Sbjct: 396 LAGSYVNGRAIRVNYAKSRDNNGGGGRGGFGGRGGGRGGRGG--RGGFDGGRGFGGRGGG 453
Query: 538 YGAPAGGYGGGSSYGGNAGGGYGGNSP 618
G GG G G +GG G G G+ P
Sbjct: 454 RG---GGRGRGGGFGGRGGRGGRGDGP 477
>gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprotein A0 [Homo
sapiens]
Length = 305
Score = 120 bits (299), Expect = 7e-025
Identities = 77/196 (39%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Frame = +1
Query: 187 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 366
K+FVGG+ E L E FS++G V A+II D+++G+ RGF FV F + + A A +
Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVV 158
Query: 367 DGQDLHGRRIRVNYATER------GSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGG 528
+ G R+ V A + G G G R G GG G G G GG GGG
Sbjct: 159 KFHPIQGHRVEVKKAVPKEDIYSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGG--GGG 216
Query: 529 AGSYGAPAGGYGGGSSYGGNAGGGYGGNSPYGGNSVGDGYG-----SNVGGGYG--VAGG 687
SY GGYGGG G NA GG GG S YGG+ G+G+G S YG +GG
Sbjct: 217 YNSY----GGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGG 272
Query: 688 VGGSDNFAQGSSSNAG 735
GG + G SN+G
Sbjct: 273 GGGGGGSSWGGRSNSG 288
>gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprotein A0
[synthetic construct]
Length = 306
Score = 120 bits (299), Expect = 7e-025
Identities = 77/196 (39%), Positives = 98/196 (50%), Gaps = 19/196 (9%)
Frame = +1
Query: 187 KIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNAMQL 366
K+FVGG+ E L E FS++G V A+II D+++G+ RGF FV F + + A A +
Sbjct: 99 KLFVGGLKGDVAEGDLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVV 158
Query: 367 DGQDLHGRRIRVNYATER------GSGFGGRGFGGPGGGNAGGYGAPSGGYGGGGGYGGG 528
+ G R+ V A + G G G R G GG G G G GG GGG
Sbjct: 159 KFHPIQGHRVEVKKAVPKEDIYSGGGGGGSRSSRGGRGGRGRGGGRDQNGLSKGG--GGG 216
Query: 529 AGSYGAPAGGYGGGSSYGGNAGGGYGGNSPYGGNSVGDGYG-----SNVGGGYG--VAGG 687
SY GGYGGG G NA GG GG S YGG+ G+G+G S YG +GG
Sbjct: 217 YNSY----GGYGGGGGGGYNAYGGGGGGSSYGGSDYGNGFGGFGSYSQHQSSYGPMKSGG 272
Query: 688 VGGSDNFAQGSSSNAG 735
GG + G SN+G
Sbjct: 273 GGGGGGSSWGGRSNSG 288
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,261,706,102,847
Number of Sequences: 15229318
Number of Extensions: 5261706102847
Number of Successful Extensions: 1224141854
Number of sequences better than 0.0: 0
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