BLASTX 7.6.2
Query= UN49191 /QuerySize=1303
(1302 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G26480.1 | Symbols: | KH domain-containing pr... 312 3e-085
TAIR9_protein||AT5G56140.1 | Symbols: | KH domain-containing pr... 303 2e-082
TAIR9_protein||AT3G08620.1 | Symbols: | KH domain-containing pr... 220 3e-057
TAIR9_protein||AT2G38610.1 | Symbols: | KH domain-containing pr... 217 1e-056
TAIR9_protein||AT2G38610.2 | Symbols: | KH domain-containing pr... 217 1e-056
TAIR9_protein||AT1G09660.1 | Symbols: | KH domain-containing qu... 204 1e-052
TAIR9_protein||AT1G09660.2 | Symbols: | KH domain-containing qu... 161 1e-039
TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related... 96 4e-020
TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related... 96 4e-020
TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related... 96 4e-020
>TAIR9_protein||AT4G26480.1 | Symbols: | KH domain-containing protein |
chr4:13372885-13378390 REVERSE
Length = 556
Score = 312 bits (799), Expect = 3e-085
Identities = 158/176 (89%), Positives = 169/176 (96%), Gaps = 4/176 (2%)
Frame = +3
Query: 384 TKRSLSSSPAPNWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 563
++RS+SSSPAPNWLNSPG+SSGLIVKR+IRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 381 SERSVSSSPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 440
Query: 564 SSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREIL 743
S++CRVLIRGRGSIKDP+KE+MMRGKPGYEHLNE LHILVEAELPIEIVDARLMQAREIL
Sbjct: 441 STDCRVLIRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREIL 500
Query: 744 ADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGGMKRAK 911
DLLTPVEETHDFYKKQQLRELALLNGSLREEG SPMSGS+SPYN+ GMKRAK
Sbjct: 501 DDLLTPVEETHDFYKKQQLRELALLNGSLREEG--SPMSGSISPYNSL--GMKRAK 552
Score = 151 bits (379), Expect = 2e-036
Identities = 82/103 (79%), Positives = 86/103 (83%), Gaps = 11/103 (10%)
Frame = +2
Query: 116 QAAEE*EDV--LMMMMTSL--------GMDGGGGGRFMTYPPPLSVPPSAPQSPNFSGGL 265
Q AEE E+V +MMMMTSL G G GGGRF+TYPPPLSVPPSAPQSPNFSGGL
Sbjct: 236 QVAEEEEEVVAVMMMMTSLGGGAGGGGGGGGSGGGRFVTYPPPLSVPPSAPQSPNFSGGL 295
Query: 266 RSQPSSFLVEQEKYLSELLAERHKLTPFLPVLPHLFRLMNQEI 394
RSQP SFLVEQEKYLSELLAERHKLTPFLPVLPH+ RLMNQEI
Sbjct: 296 RSQP-SFLVEQEKYLSELLAERHKLTPFLPVLPHVCRLMNQEI 337
>TAIR9_protein||AT5G56140.1 | Symbols: | KH domain-containing protein |
chr5:22725462-22727932 FORWARD
Length = 316
Score = 303 bits (774), Expect = 2e-082
Identities = 153/177 (86%), Positives = 165/177 (93%), Gaps = 4/177 (2%)
Frame = +3
Query: 384 TKRSLSSSPAPNWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEA 563
++RS+ SSP PNWLNSPG+SSGLI KR+IRVDIPVD YPN+NFVGRLLGPRGNSLKRVEA
Sbjct: 140 SERSVPSSPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEA 199
Query: 564 SSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREIL 743
S++CRVLIRGRGSIKDP+KEEMMRGKPGYEHLNE LHILVEAELPIEIVDARLMQAREIL
Sbjct: 200 STDCRVLIRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREIL 259
Query: 744 ADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGGMKRAKT 914
DLLTP+EETHD YKKQQLRELALLNG+LREEG SPMSGSVSPYN+ GMKRAKT
Sbjct: 260 DDLLTPMEETHDMYKKQQLRELALLNGTLREEG--SPMSGSVSPYNSL--GMKRAKT 312
Score = 131 bits (327), Expect = 2e-030
Identities = 65/76 (85%), Positives = 68/76 (89%), Gaps = 1/76 (1%)
Frame = +2
Query: 167 GMDGGGGGRFMTYPPPLSVPPSAPQSPNFSGGLRSQPSSFLVEQEKYLSELLAERHKLTP 346
G+ GGGGGRFMTY LSVPPSAPQSPN+SGGLRSQ SS VEQEKYLSELLAERHKLTP
Sbjct: 20 GIGGGGGGRFMTYSSSLSVPPSAPQSPNYSGGLRSQ-SSVFVEQEKYLSELLAERHKLTP 78
Query: 347 FLPVLPHLFRLMNQEI 394
FLPVLPH FRL+NQEI
Sbjct: 79 FLPVLPHAFRLLNQEI 94
>TAIR9_protein||AT3G08620.1 | Symbols: | KH domain-containing protein |
chr3:2617925-2620314 FORWARD
Length = 284
Score = 220 bits (558), Expect = 3e-057
Identities = 110/167 (65%), Positives = 137/167 (82%), Gaps = 4/167 (2%)
Frame = +3
Query: 411 APNWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIR 590
A W +P + S VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA++ CRV IR
Sbjct: 118 AMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 177
Query: 591 GRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPVEE 770
G+GSIKDP KEE ++GKPGYEHLNEQLHIL+EA+LPI+IVD +L QA+EI+ +L+ PV+E
Sbjct: 178 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 237
Query: 771 THDFYKKQQLRELALLNGSLREEGSPSPMSGSVSPYNNSLGGMKRAK 911
+ D+ K+QQLRELALLN +LR E SP P SGSVSP+N++ MKR K
Sbjct: 238 SQDYIKRQQLRELALLNSNLR-ENSPGP-SGSVSPFNSN--AMKRPK 280
>TAIR9_protein||AT2G38610.1 | Symbols: | KH domain-containing protein |
chr2:16147552-16149638 REVERSE
Length = 287
Score = 217 bits (552), Expect = 1e-056
Identities = 111/180 (61%), Positives = 139/180 (77%), Gaps = 6/180 (3%)
Frame = +3
Query: 384 TKRSLSSSP--APNWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 557
++ LS +P +W +PG+ S VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRV
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRV 167
Query: 558 EASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQARE 737
EA++ CRV IRG+GSIKDP KE+ +RG+PGYEHLNEQLHIL+EA+LP IV+ RL QA+E
Sbjct: 168 EATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQE 227
Query: 738 ILADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPM-SGSVSPYNNSLGGMKRAKT 914
I+ +LL PV+E+ DF K+QQLRELALLN + E SP P GSVSP+N+S KR KT
Sbjct: 228 IIEELLKPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS---GKRPKT 284
>TAIR9_protein||AT2G38610.2 | Symbols: | KH domain-containing protein |
chr2:16147552-16149638 REVERSE
Length = 287
Score = 217 bits (552), Expect = 1e-056
Identities = 111/180 (61%), Positives = 139/180 (77%), Gaps = 6/180 (3%)
Frame = +3
Query: 384 TKRSLSSSP--APNWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRV 557
++ LS +P +W +PG+ S VKR +R++IPVD YPN+NFVGRLLGPRGNSLKRV
Sbjct: 108 SQERLSGTPGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRV 167
Query: 558 EASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQARE 737
EA++ CRV IRG+GSIKDP KE+ +RG+PGYEHLNEQLHIL+EA+LP IV+ RL QA+E
Sbjct: 168 EATTGCRVFIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQE 227
Query: 738 ILADLLTPVEETHDFYKKQQLRELALLNGSLREEGSPSPM-SGSVSPYNNSLGGMKRAKT 914
I+ +LL PV+E+ DF K+QQLRELALLN + E SP P GSVSP+N+S KR KT
Sbjct: 228 IIEELLKPVDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS---GKRPKT 284
>TAIR9_protein||AT1G09660.1 | Symbols: | KH domain-containing quaking protein,
putative | chr1:3128032-3130791 REVERSE
Length = 299
Score = 204 bits (518), Expect = 1e-052
Identities = 105/175 (60%), Positives = 135/175 (77%), Gaps = 12/175 (6%)
Frame = +3
Query: 408 PAP-NWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVL 584
P+P W+ PG + IVK+ IR+D+PVDKYP+YNFVGR+LGPRGNSLKRVE ++ CRV
Sbjct: 128 PSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVF 187
Query: 585 IRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPV 764
IRGRGS+KD VKEE ++GKPGYEHL E LH+L+EAELP +I+++RL A L LL P+
Sbjct: 188 IRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPM 247
Query: 765 EETHDFYKKQQLRELALLNGSLREEGSPSP-----MSGSVSPYNNSLGGMKRAKT 914
+E+ D YK++QL+ELA LNG+LREE SPSP +S S+SP+N+ KRAKT
Sbjct: 248 DESMDHYKREQLKELAALNGTLREE-SPSPSLSPCLSPSMSPFNS-----KRAKT 296
>TAIR9_protein||AT1G09660.2 | Symbols: | KH domain-containing quaking protein,
putative | chr1:3128205-3130791 REVERSE
Length = 265
Score = 161 bits (406), Expect = 1e-039
Identities = 77/132 (58%), Positives = 100/132 (75%), Gaps = 3/132 (2%)
Frame = +3
Query: 408 PAP-NWLNSPGNSSGLIVKRSIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVL 584
P+P W+ PG + IVK+ IR+D+PVDKYP+YNFVGR+LGPRGNSLKRVE ++ CRV
Sbjct: 128 PSPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVF 187
Query: 585 IRGRGSIKDPVKEEMMRGKPGYEHLNEQLHILVEAELPIEIVDARLMQAREILADLLTPV 764
IRGRGS+KD VKEE ++GKPGYEHL E LH+L+EAELP +I+++RL A L LL P+
Sbjct: 188 IRGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPM 247
Query: 765 EETHDFYKKQQL 800
H ++K +
Sbjct: 248 --VHSYHKSPNM 257
>TAIR9_protein||AT5G51300.1 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = +3
Query: 480 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 659
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 660 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 839
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>TAIR9_protein||AT5G51300.2 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = +3
Query: 480 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 659
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 660 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 839
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
>TAIR9_protein||AT5G51300.3 | Symbols: | splicing factor-related |
chr5:20849881-20852295 REVERSE
Length = 805
Score = 96 bits (237), Expect = 4e-020
Identities = 50/120 (41%), Positives = 78/120 (65%), Gaps = 6/120 (5%)
Frame = +3
Query: 480 IPVDKYPNYNFVGRLLGPRGNSLKRVEASSECRVLIRGRGSIKDPVKEEMMRGKPGYEHL 659
IP+ ++P YNF+G ++GPRGN+ KR+E + +++IRG+GS+K+ + + +
Sbjct: 247 IPMKEFPGYNFIGLIIGPRGNTQKRMERETGAKIVIRGKGSVKEG-RHQQKKDLKYDPSE 305
Query: 660 NEQLHILVEAELPIEIVDARLMQAREILADLLTPVEETHDFYKKQQLRELALLNGSLREE 839
NE LH+LVEAE L A ++ LL PV+E + +K+QQLRELA LNG++R+E
Sbjct: 306 NEDLHVLVEAE-----TQEALEAAAGMVEKLLQPVDEVLNEHKRQQLRELATLNGTIRDE 360
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,436,080,488
Number of Sequences: 33410
Number of Extensions: 23436080488
Number of Successful Extensions: 739741538
Number of sequences better than 0.0: 0
|
