BLASTX 7.6.2
Query= UN49236 /QuerySize=1475
(1474 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32080.1 | Symbols: | membrane protein, putat... 445 4e-125
>TAIR9_protein||AT1G32080.1 | Symbols: | membrane protein, putative |
chr1:11537572-11539756 REVERSE
Length = 513
Score = 445 bits (1144), Expect = 4e-125
Identities = 239/279 (85%), Positives = 248/279 (88%), Gaps = 5/279 (1%)
Frame = +2
Query: 8 SLLALSSSRNRHPCPKILFQSKNGKSSDSNATQKLNLSSIRKTDGQSTRFMQMG-SREMR 184
S LA S +RNR C KI F SKNGK +S+ QKLNLS RK DGQ RF+QMG S+EM
Sbjct: 11 SPLASSPARNRLSCSKIRFGSKNGKILNSDGAQKLNLSKFRKPDGQ--RFLQMGSSKEMN 68
Query: 185 FGRKLSTQAMDDGAGTGNTSETISRKVFATTHLLVSLGIILAADRFLKQAFVAASIKFPS 364
F RKLS QAM DGAGTGNTS TISR V A +HLLVSLGIILAAD FLKQAFVAASIKFPS
Sbjct: 69 FERKLSVQAM-DGAGTGNTS-TISRNVIAISHLLVSLGIILAADYFLKQAFVAASIKFPS 126
Query: 365 ALFGMFCIFSVLMILDSVVPAAATGMMNFFEPAFLFIQRWLPLFYVPSLVVLPLSVRDIP 544
ALFGMFCIFSVLMI DSVVPAAA G+MNFFEPAFLFIQRWLPLFYVPSLVVLPLSVRDIP
Sbjct: 127 ALFGMFCIFSVLMIFDSVVPAAANGLMNFFEPAFLFIQRWLPLFYVPSLVVLPLSVRDIP 186
Query: 545 AASGVKICYIVAGGWLASLCVAGFTAIAVRKMVKTEMTEAEPMSKPSPFSTLELWSWSGI 724
AASGVKICYIVAGGWLASLCVAG+TAIAVRKMVKTEMTEAEPM+KPSPFSTLELWSWSGI
Sbjct: 187 AASGVKICYIVAGGWLASLCVAGYTAIAVRKMVKTEMTEAEPMAKPSPFSTLELWSWSGI 246
Query: 725 FVVSFVGALFYPTSLGTSARTCLPFLLSSTVLGYIVGSG 841
FVVSFVGALFYP SLGTSART LPFLLSSTVLGYIVGSG
Sbjct: 247 FVVSFVGALFYPNSLGTSARTSLPFLLSSTVLGYIVGSG 285
Score = 218 bits (555), Expect = 7e-057
Identities = 116/116 (100%)
Frame = +3
Query: 1125 GNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYS 1304
GNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYS
Sbjct: 324 GNYLTKVASDPGAGDILMGFLGSVILSFAFSMFKQRKLVKRHAAEIFTSVIVSTVFSLYS 383
Query: 1305 TALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGAN 1472
TALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGAN
Sbjct: 384 TALVGRLVGLEPSLTVSILPRCITVALALSIVSLFEGTNSSLTAAVVVVTGLIGAN 439
Score = 80 bits (197), Expect = 2e-015
Identities = 39/41 (95%), Positives = 40/41 (97%)
Frame = +3
Query: 927 SRLPSSIKKVFHPIICCALSSVLAALAFGYASGSGLDPVLG 1049
S LPSSIKKVFHPIICCALS+VLAALAFGYASGSGLDPVLG
Sbjct: 284 SGLPSSIKKVFHPIICCALSAVLAALAFGYASGSGLDPVLG 324
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,436,080,488
Number of Sequences: 33410
Number of Extensions: 23436080488
Number of Successful Extensions: 739741538
Number of sequences better than 0.0: 0
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