BLASTX 7.6.2
Query= UN49272 /QuerySize=1138
(1137 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotei... 330 2e-090
TAIR9_protein||AT4G09040.1 | Symbols: | RNA recognition motif (... 149 5e-036
TAIR9_protein||AT4G09040.2 | Symbols: | RNA recognition motif (... 130 2e-030
TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA b... 113 2e-025
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 110 3e-024
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 106 5e-023
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 104 1e-022
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 75 7e-014
TAIR9_protein||AT1G22760.1 | Symbols: PAB3 | PAB3 (POLY(A) BINDI... 72 4e-013
TAIR9_protein||AT1G71770.1 | Symbols: PAB5 | PAB5 (POLY(A)-BINDI... 66 3e-011
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 62 5e-010
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 62 5e-010
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 56 4e-008
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 56 4e-008
TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANG... 55 7e-008
TAIR9_protein||AT2G36660.1 | Symbols: PAB7 | PAB7 (POLY(A) BINDI... 54 2e-007
>TAIR9_protein||AT2G35410.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr2:14898341-14899590
FORWARD
Length = 309
Score = 330 bits (844), Expect = 2e-090
Identities = 189/265 (71%), Positives = 213/265 (80%), Gaps = 13/265 (4%)
Frame = -3
Query: 1111 MAVLEAALSILSLSFSSSSSSSSSSSSSKPHLFSRQTKPISLSIRTPTNLSPVSPL-SIP 935
MAVLEA+LSI SFSSSSSSS SK S K +LS+R P+NLSPV L S
Sbjct: 1 MAVLEASLSI--FSFSSSSSSSKPYLFSKR---SSSLKLTALSLRIPSNLSPVFSLRSGS 55
Query: 934 LRARRIVSVFSSVAEEETSL-----TDEKTEETTQTTNLKRKLFVFNLPWSMSVNDISNL 770
+RR+VSV SVAE+ETS +EKTEE TQ +NLKRKLFVFNLPWSMSVNDIS L
Sbjct: 56 DNSRRLVSVLCSVAEKETSADEETSQEEKTEE-TQNSNLKRKLFVFNLPWSMSVNDISEL 114
Query: 769 FGQCGTVLSVEIIKQKDGKNRGFAFVTMSSGEEAQSAVEKFDSFQVSGRIIRVNFARKFK 590
FGQCGTV +VEII+QKDGKNRGFAFVTM+SGEEAQ+A++KFD+FQVSGRII V+FAR+FK
Sbjct: 115 FGQCGTVNNVEIIRQKDGKNRGFAFVTMASGEEAQAAIDKFDTFQVSGRIISVSFARRFK 174
Query: 589 KP-PKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFFTAADFNLVSARVVFADPGGR 413
KP PK + +PG+TRHKLYVSNLAWKARSTHLRE FTAADFN VSARVVFADP GR
Sbjct: 175 KPTPKSPNDLPSPAPGDTRHKLYVSNLAWKARSTHLRELFTAADFNPVSARVVFADPEGR 234
Query: 412 ASGYGFVSFITREEAEDAIFKLDGK 338
+SGYGFVSF TREEAE+AI KL+GK
Sbjct: 235 SSGYGFVSFATREEAENAITKLNGK 259
>TAIR9_protein||AT4G09040.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:5795075-5797315 REVERSE
Length = 305
Score = 149 bits (374), Expect = 5e-036
Identities = 86/225 (38%), Positives = 135/225 (60%), Gaps = 10/225 (4%)
Frame = -3
Query: 991 SLSIRTPT----NLSPVSPLSIPLRARRIVSVFSSVAEE---ETSLTDEKTEETTQTTNL 833
SLS+ TP+ + P SIP ++R + S FS+ +E E+S + E +
Sbjct: 33 SLSLSTPSLCRLHRHATFPDSIPAKSRNLTSYFSTTTQEPVLESSSSSSSAPEVVEEEIS 92
Query: 832 KRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKDGKNRGFAFVTMSSGEEAQSAVE 653
K +L N+PW+ + DI +LF + G+V+ +E+ K +NRG F+ M+S EEA +A++
Sbjct: 93 KTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALK 152
Query: 652 KFDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFF 473
+S + GR ++V++A+ KK K P T SP T L+V+NLA++AR+ HL+EFF
Sbjct: 153 SLESCEYEGRRLKVDYAKTKKK--KTYAPRETPSPVPT-FNLFVANLAFEARAKHLKEFF 209
Query: 472 TAADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLDGK 338
A N+VS V+F + R+SGYGFVSF T+++AE A+ + GK
Sbjct: 210 DADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 254
>TAIR9_protein||AT4G09040.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr4:5795075-5797193 REVERSE
Length = 245
Score = 130 bits (326), Expect = 2e-030
Identities = 69/165 (41%), Positives = 107/165 (64%), Gaps = 3/165 (1%)
Frame = -3
Query: 832 KRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKDGKNRGFAFVTMSSGEEAQSAVE 653
K +L N+PW+ + DI +LF + G+V+ +E+ K +NRG F+ M+S EEA +A++
Sbjct: 33 KTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHKKERNRGLVFIEMASPEEAATALK 92
Query: 652 KFDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFF 473
+S + GR ++V++A+ KK K P T SP T L+V+NLA++AR+ HL+EFF
Sbjct: 93 SLESCEYEGRRLKVDYAKTKKK--KTYAPRETPSPVPT-FNLFVANLAFEARAKHLKEFF 149
Query: 472 TAADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLDGK 338
A N+VS V+F + R+SGYGFVSF T+++AE A+ + GK
Sbjct: 150 DADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALIEFQGK 194
>TAIR9_protein||AT3G52380.1 | Symbols: CP33, PDE322 | CP33; RNA binding |
chr3:19421619-19422855 FORWARD
Length = 330
Score = 113 bits (282), Expect = 2e-025
Identities = 65/192 (33%), Positives = 113/192 (58%), Gaps = 9/192 (4%)
Frame = -3
Query: 892 EEETSLTDEKTEE---TTQTTNLKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQK 722
EEE +E+ EE TTQ + + +L+V NLP++++ +++S +FG+ GTV+ V+I+ K
Sbjct: 92 EEEGDEGEEEVEEEKQTTQASGEEGRLYVGNLPYTITSSELSQIFGEAGTVVDVQIVYDK 151
Query: 721 -DGKNRGFAFVTMSSGEEAQSAVEKFDSFQVSGRIIRVNFARKFKKPPKPLPPSA----T 557
++RGF FVTM S EEA+ A++ F+S Q+ GR ++VNF + + +
Sbjct: 152 VTDRSRGFGFVTMGSIEEAKEAMQMFNSSQIGGRTVKVNFPEVPRGGENEVMRTKIRDNN 211
Query: 556 SSPGETRHKLYVSNLAWKARSTHLREFFTAADFNLVSARVVFADPGGRASGYGFVSFITR 377
S ++ HK+Y NL W S L++ F ++ A+V++ GR+ G+GF+SF +
Sbjct: 212 RSYVDSPHKVYAGNLGWNLTSQGLKDAF-GDQPGVLGAKVIYERNTGRSRGFGFISFESA 270
Query: 376 EEAEDAIFKLDG 341
E + A+ ++G
Sbjct: 271 ENVQSALATMNG 282
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 110 bits (273), Expect = 3e-024
Identities = 74/214 (34%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Frame = -3
Query: 967 NLSPVSPLSIPLRA----RRIVSVFSSVAEEETSLTDEKTEETTQTTNLKRKLFVFNLPW 800
N S PL I R+ R++S +V EE D + + KL+ NLP+
Sbjct: 35 NFSTPKPLLISSRSCSRRFRVLSETITVKLEEEEKDDGASAVLDPPAAVNTKLYFGNLPY 94
Query: 799 SMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSAVEKFDSFQVSGR 623
++ ++ + VE++ +D G++RGFAFVTMS+ E+ ++ D + GR
Sbjct: 95 NVDSATLAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGR 154
Query: 622 IIRVNFARKFKKPPKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFFTAADFNLVSA 443
++VNFA K K +PL P ET HKL+V NL+W S L F ++V A
Sbjct: 155 ALKVNFADKPKPNKEPLYP-------ETEHKLFVGNLSWTVTSESLAGAFRECG-DVVGA 206
Query: 442 RVVFADPGGRASGYGFVSFITREEAEDAIFKLDG 341
RVVF GR+ GYGFV + ++ E E A+ LDG
Sbjct: 207 RVVFDGDTGRSRGYGFVCYSSKAEMETALESLDG 240
Score = 67 bits (162), Expect = 2e-011
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = -3
Query: 832 KRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSAV 656
+ KLFV NL W+++ ++ F +CG V+ ++ D G++RG+ FV SS E ++A+
Sbjct: 176 EHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMETAL 235
Query: 655 EKFDSFQVSGRIIRVNFAR 599
E D F++ GR IRVN A+
Sbjct: 236 ESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 106 bits (262), Expect = 5e-023
Identities = 66/164 (40%), Positives = 90/164 (54%), Gaps = 7/164 (4%)
Frame = -3
Query: 826 KLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSAVEK 650
KLFV NLP+ + ++ LF Q GTV E+I +D ++RGF FVTMS+ EEA+ AVEK
Sbjct: 114 KLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEK 173
Query: 649 FDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFFT 470
F+SF+V+GR + VN + P+ P + ++YV NL W S L F+
Sbjct: 174 FNSFEVNGRRLTVN-----RAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFS 228
Query: 469 AADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLDGK 338
+V ARVV GR+ G+GFV E AI LDG+
Sbjct: 229 EHG-KVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQ 271
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 104 bits (258), Expect = 1e-022
Identities = 62/164 (37%), Positives = 95/164 (57%), Gaps = 7/164 (4%)
Frame = -3
Query: 826 KLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSAVEK 650
KLFV NL + ++ ++ LF Q GTV E+I ++ ++RGF FVTMSS +EA++AVEK
Sbjct: 151 KLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEK 210
Query: 649 FDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHKLYVSNLAWKARSTHLREFFT 470
F+ + ++GR++ VN K P+ P E ++YV NL W + L + F+
Sbjct: 211 FNRYDLNGRLLTVN-----KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFS 265
Query: 469 AADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLDGK 338
+V ARVV+ GR+ G+GFV+ +E +AI LDG+
Sbjct: 266 EHG-KVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQ 308
Score = 62 bits (149), Expect = 6e-010
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = -3
Query: 826 KLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSAVEK 650
+++V NLPW + + LF + G V+ ++ ++ G++RGF FVTMS +E A+
Sbjct: 245 RVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISA 304
Query: 649 FDSFQVSGRIIRVNFARKFKKPPK 578
D + GR IRVN A ++PP+
Sbjct: 305 LDGQNLEGRAIRVNVAE--ERPPR 326
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 75 bits (183), Expect = 7e-014
Identities = 57/176 (32%), Positives = 90/176 (51%), Gaps = 9/176 (5%)
Frame = -3
Query: 1093 ALSILSLSFSSSSSSSSSSSSSKPHLFSRQTKPISLSIRTPT-NLSPVSPLSIPL-RARR 920
A S SL+ SS + S S+P S + +S + + + + S + + P R R
Sbjct: 2 AASASSLALSSFNPKSLPFGVSRPASVSLLSPSLSFKLNSDSVSFSIAAKWNSPASRFAR 61
Query: 919 IVSVFSSVAEEETSLTDEKTEETTQTTNLKRKLFVFNLPWSMSVNDISNLFGQCGTVLSV 740
V++ S EE D + Q+ + KLFV NLP+++ ++ LF G V V
Sbjct: 62 NVAITSEFEVEEDGFADVAPPK-EQSFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMV 120
Query: 739 EIIKQK-DGKNRGFAFVTMSSGEEAQSAVEKFDSFQVSGRIIRVNFARKFKKPPKP 575
E+I K G++RGF FVTMSS E ++A ++F+ +++ GR +RVN PP P
Sbjct: 121 EVIYDKITGRSRGFGFVTMSSVSEVEAAAQQFNGYELDGRPLRVNAG-----PPPP 171
>TAIR9_protein||AT1G22760.1 | Symbols: PAB3 | PAB3 (POLY(A) BINDING PROTEIN 3);
RNA binding / translation initiation factor | chr1:8055599-8058799
FORWARD
Length = 661
Score = 72 bits (176), Expect = 4e-013
Identities = 48/183 (26%), Positives = 87/183 (47%), Gaps = 7/183 (3%)
Frame = -3
Query: 868 EKTEETTQTTNLKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKDGKNRGFAFVT 689
E+ + T ++V NLP + +++ FG+ G + S +++ + G +R F FV
Sbjct: 216 ERARDENTPTPRFTNVYVKNLPKEIGEDELRKTFGKFGVISSAVVMRDQSGNSRCFGFVN 275
Query: 688 MSSGEEAQSAVEKFDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHK-----LY 524
E A SAVEK + + ++ V A+K + + L K LY
Sbjct: 276 FECTEAAASAVEKMNGISLGDDVLYVGRAQKKSEREEELRRKFEQERINRFEKSQGANLY 335
Query: 523 VSNLAWKARSTHLREFFTAADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLD 344
+ NL L+E F +++ V++ V +P G + G+GFV++ EEA A+ +++
Sbjct: 336 LKNLDDSVDDEKLKEMF--SEYGNVTSSKVMLNPQGMSRGFGFVAYSNPEEALRALSEMN 393
Query: 343 GKV 335
GK+
Sbjct: 394 GKM 396
>TAIR9_protein||AT1G71770.1 | Symbols: PAB5 | PAB5 (POLY(A)-BINDING PROTEIN 5);
RNA binding / poly(A) binding / translation initiation factor |
chr1:26990777-26993447 REVERSE
Length = 669
Score = 66 bits (160), Expect = 3e-011
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Frame = -3
Query: 823 LFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKDGKNRGFAFVTMSSGEEAQSAVEKFD 644
++V NLP ++ +++ FG+ G + S ++K + G +R F FV S E A AVEK +
Sbjct: 227 VYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAVAVEKMN 286
Query: 643 SFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETRHK-----LYVSNLAWKARSTHLRE 479
+ ++ V A+K + L K LY+ NL L+E
Sbjct: 287 GISLGEDVLYVGRAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKE 346
Query: 478 FFTAADFNLVSARVVFADPGGRASGYGFVSFITREEAEDAIFKLDGKV 335
F +++ V++ V + G + G+GFV++ EEA A+ +++GK+
Sbjct: 347 MF--SEYGNVTSCKVMMNSQGLSRGFGFVAYSNPEEALLAMKEMNGKM 392
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 62 bits (150), Expect = 5e-010
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = -3
Query: 826 KLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQK-DGKNRGFAFVTMSSGEEAQSAVEK 650
KLFV NL +++ ++ LF G V VE+I K G++RGF FVTMS+ E ++A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 649 FDSFQVSGRIIRVNFARKFKKPPKP 575
F+ ++ GR +RVN PP P
Sbjct: 160 FNGYEFEGRPLRVNAG-----PPPP 179
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 62 bits (150), Expect = 5e-010
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Frame = -3
Query: 826 KLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQK-DGKNRGFAFVTMSSGEEAQSAVEK 650
KLFV NL +++ ++ LF G V VE+I K G++RGF FVTMS+ E ++A ++
Sbjct: 100 KLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQ 159
Query: 649 FDSFQVSGRIIRVNFARKFKKPPKP 575
F+ ++ GR +RVN PP P
Sbjct: 160 FNGYEFEGRPLRVNAG-----PPPP 179
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 56 bits (133), Expect = 4e-008
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -3
Query: 835 LKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSA 659
+ KLFV L W + + F G V +I ++ G++RGF FV+ S + A +A
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNA 92
Query: 658 VEKFDSFQVSGRIIRVNFARKFKKPPK 578
+++ D +++GR IRVN A + P+
Sbjct: 93 IKEMDGKELNGRQIRVNLATERSSAPR 119
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 56 bits (133), Expect = 4e-008
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Frame = -3
Query: 835 LKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKD-GKNRGFAFVTMSSGEEAQSA 659
+ KLFV L W + + F G V +I ++ G++RGF FV+ S + A +A
Sbjct: 33 MSSKLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNA 92
Query: 658 VEKFDSFQVSGRIIRVNFARKFKKPPK 578
+++ D +++GR IRVN A + P+
Sbjct: 93 IKEMDGKELNGRQIRVNLATERSSAPR 119
>TAIR9_protein||AT3G18610.1 | Symbols: ATRANGAP1, PARLL1 | ATRANGAP1 (RAN
GTPASE-ACTIVATING PROTEIN 1); nucleic acid binding / nucleotide binding
| chr3:6404270-6407822 REVERSE
Length = 637
Score = 55 bits (131), Expect = 7e-008
Identities = 37/125 (29%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Frame = -3
Query: 895 AEEETSLTDEKTEETTQTTNLKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQKDG 716
AE++++ KT T QT + LF NL + ++ +DI N F + G V+ V + DG
Sbjct: 363 AEQKSNAKQPKT-PTNQTQGGSKTLFAGNLSYQIARSDIENFFKEAGEVVDVRLSSFDDG 421
Query: 715 KNRGFAFVTMSSGEEAQSAVEKFDSFQVSGRIIRVNFARKFKKPPKPLPPSATSSPGETR 536
+G+ + +S EEAQ A+E + + GR +R++ A + P P G
Sbjct: 422 SFKGYGHIEFASPEEAQKALE-MNGKLLLGRDVRLDLANERGTPRNSNP--GRKGEGSQS 478
Query: 535 HKLYV 521
+YV
Sbjct: 479 RTIYV 483
>TAIR9_protein||AT2G36660.1 | Symbols: PAB7 | PAB7 (POLY(A) BINDING PROTEIN 7);
RNA binding / translation initiation factor | chr2:15361476-15364398
REVERSE
Length = 610
Score = 54 bits (127), Expect = 2e-007
Identities = 33/103 (32%), Positives = 55/103 (53%), Gaps = 4/103 (3%)
Frame = -3
Query: 895 AEEETSLTD---EKTEETTQTTNLKRKLFVFNLPWSMSVNDISNLFGQCGTVLSVEIIKQ 725
AE E L + EK EE + ++V N+ +++ ++ F QCGT+ S +++
Sbjct: 280 AEREQLLREQFKEKHEEQKMIAKVS-NIYVKNVNVAVTEEELRKHFSQCGTITSTKLMCD 338
Query: 724 KDGKNRGFAFVTMSSGEEAQSAVEKFDSFQVSGRIIRVNFARK 596
+ GK++GF FV S+ EEA AV+ F G+ + V A+K
Sbjct: 339 EKGKSKGFGFVCFSTPEEAIDAVKTFHGQMFHGKPLYVAIAQK 381
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,478,492,764
Number of Sequences: 33410
Number of Extensions: 23478492764
Number of Successful Extensions: 739753858
Number of sequences better than 0.0: 0
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