BLASTX 7.6.2

Query= UN49302 /QuerySize=1027
        (1026 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT4G39040.1 | Symbols:  | RNA binding | chr4:1818...    399   1e-111
TAIR9_protein||AT4G39040.2 | Symbols:  | RNA binding | chr4:1818...    361   5e-100
TAIR9_protein||AT2G21350.1 | Symbols:  | RNA binding | chr2:9136...    174   7e-044

>TAIR9_protein||AT4G39040.1 | Symbols:  | RNA binding | chr4:18189249-18190535
        REVERSE

          Length = 297

 Score =  399 bits (1025), Expect = 1e-111
 Identities = 214/292 (73%), Positives = 237/292 (81%), Gaps = 23/292 (7%)
 Frame = -2

Query: 977 SSSSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTS 798
           S SSTHLIHNLLRHP+PPS  CLF+RPF FSA   QS+  NKPRFQS SSK PLP H   
Sbjct:   9 SCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSK-PLPCH--- 64

Query: 797 SSSSLVAKSFSAIDEPDLGEEDES-------EEYDYKEEEEDEEEVESGMVSARGSED-- 645
            S+SLV KSFS+IDEPDL E++ES       EEY+Y++EEE++E+    +VS RG ED  
Sbjct:  65 -SASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGIEDSE 123

Query: 644 ---------DYEEDKIEKMKKKARGSGLKLTIKEKKELASYAHSLGDKLKCQLVGKSGVT 492
                    D EE      KKK+RGS LKL+IKEKKELASYAHSLGDKLKCQLVGKSGVT
Sbjct: 124 ASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGKSGVT 183

Query: 491 DSVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVAVGQIGRTVILYRPSPT 312
           DSVVFSFLETLEKNELLKVKIRKTSP+E+EDAV HLEEATGSVAVGQIGRTVILYRPSPT
Sbjct: 184 DSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPSPT 243

Query: 311 KMKAEEKKKEVERLLIRRRQKFSNSRPTRPFRREYSERPDGRGRRGGSRVAT 156
           KMKAE KKKEVER+ I RRQK++N+RPT+PFRREYSERPDGRGRRGGSRV T
Sbjct: 244 KMKAEAKKKEVERMSITRRQKYANTRPTKPFRREYSERPDGRGRRGGSRVPT 295

>TAIR9_protein||AT4G39040.2 | Symbols:  | RNA binding | chr4:18189292-18190535
        REVERSE

          Length = 281

 Score =  361 bits (925), Expect = 5e-100
 Identities = 195/272 (71%), Positives = 218/272 (80%), Gaps = 23/272 (8%)
 Frame = -2

Query: 977 SSSSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTS 798
           S SSTHLIHNLLRHP+PPS  CLF+RPF FSA   QS+  NKPRFQS SSK PLP H   
Sbjct:   9 SCSSTHLIHNLLRHPKPPSPVCLFLRPFCFSASVSQSNHRNKPRFQSFSSK-PLPCH--- 64

Query: 797 SSSSLVAKSFSAIDEPDLGEEDES-------EEYDYKEEEEDEEEVESGMVSARGSED-- 645
            S+SLV KSFS+IDEPDL E++ES       EEY+Y++EEE++E+    +VS RG ED  
Sbjct:  65 -SASLVVKSFSSIDEPDLEEDEESEDEDFSAEEYEYEDEEEEDEQDSGVVVSERGIEDSE 123

Query: 644 ---------DYEEDKIEKMKKKARGSGLKLTIKEKKELASYAHSLGDKLKCQLVGKSGVT 492
                    D EE      KKK+RGS LKL+IKEKKELASYAHSLGDKLKCQLVGKSGVT
Sbjct: 124 ASEEVSEIGDKEEKTENTKKKKSRGSALKLSIKEKKELASYAHSLGDKLKCQLVGKSGVT 183

Query: 491 DSVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVAVGQIGRTVILYRPSPT 312
           DSVVFSFLETLEKNELLKVKIRKTSP+E+EDAV HLEEATGSVAVGQIGRTVILYRPSPT
Sbjct: 184 DSVVFSFLETLEKNELLKVKIRKTSPDELEDAVQHLEEATGSVAVGQIGRTVILYRPSPT 243

Query: 311 KMKAEEKKKEVERLLIRRRQKFSNSRPTRPFR 216
           KMKAE KKKEVER+ I RRQK++N+RPT+PFR
Sbjct: 244 KMKAEAKKKEVERMSITRRQKYANTRPTKPFR 275

>TAIR9_protein||AT2G21350.1 | Symbols:  | RNA binding | chr2:9136451-9137267
        REVERSE

          Length = 223

 Score =  174 bits (441), Expect = 7e-044
 Identities = 95/148 (64%), Positives = 113/148 (76%), Gaps = 5/148 (3%)
 Frame = -2

Query: 707 EEEEDEEEVESGMVSARGSEDDYEEDKIE----KMKKKARGSGLKLTIKEKKELASYAHS 540
           E E+DE+ V S + S     DD +ED  E     M++  R S L+L+ KEK++LASYAH 
Sbjct:  75 ESEQDEDNV-SLVASLNEINDDGQEDGSELTMVSMRENRRSSALELSAKEKRKLASYAHH 133

Query: 539 LGDKLKCQLVGKSGVTDSVVFSFLETLEKNELLKVKIRKTSPEEMEDAVMHLEEATGSVA 360
           LGDKLK QLVGKSGVTDSVV SF+ETLEKNELLKVKI +T P E+ED ++ LEEATGSV+
Sbjct: 134 LGDKLKSQLVGKSGVTDSVVLSFVETLEKNELLKVKIHRTCPGELEDMILRLEEATGSVS 193

Query: 359 VGQIGRTVILYRPSPTKMKAEEKKKEVE 276
           VGQI RTVILYRPSPTK+KA+E KK  E
Sbjct: 194 VGQIARTVILYRPSPTKLKADEDKKRNE 221


 Score =  70 bits (170), Expect = 2e-012
 Identities = 54/142 (38%), Positives = 72/142 (50%), Gaps = 7/142 (4%)
 Frame = -2

Query: 977 SSSSTHLIHNLLRHPEPPSSFCLFIRPFRFSAVTCQSSRCNKPRFQSISSKPPLPFHSTS 798
           SS+ T+LIH+LLRH +P S  CLF+RPF  S +  +SS         ISS  PLP    S
Sbjct:   6 SSTLTNLIHHLLRHRKPTSPVCLFLRPFSVSLLGRKSS-----HHAWISSSLPLPRPYIS 60

Query: 797 SSSSLVAKSFSAIDEPDLGEEDESEEYDYKEEEED--EEEVESGMVSARGSEDDYEEDKI 624
            S  LV KSFS++DE +  E++ S      E  +D  E+  E  MVS R +      +  
Sbjct:  61 FSPLLVPKSFSSVDESEQDEDNVSLVASLNEINDDGQEDGSELTMVSMRENRRSSALELS 120

Query: 623 EKMKKKARGSGLKLTIKEKKEL 558
            K K+K       L  K K +L
Sbjct: 121 AKEKRKLASYAHHLGDKLKSQL 142

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,478,492,764
Number of Sequences: 33410
Number of Extensions: 23478492764
Number of Successful Extensions: 739753858
Number of sequences better than 0.0: 0