BLASTX 7.6.2
Query= UN49329 /QuerySize=962
(961 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidops... 280 2e-073
gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidop... 278 1e-072
gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidop... 204 2e-050
gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus tr... 201 1e-049
gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidops... 199 8e-049
gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa] 199 8e-049
gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT... 190 3e-046
gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa] 190 5e-046
gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa] 190 5e-046
gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus tr... 189 7e-046
gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicoti... 188 1e-045
gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacety... 184 2e-044
gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis ... 177 3e-042
gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putativ... 150 4e-034
gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum ... 148 1e-033
gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicoti... 148 2e-033
gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacety... 145 1e-032
gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays] 145 1e-032
gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicoti... 145 1e-032
gi|194694834|gb|ACF81501.1| unknown [Zea mays] 144 3e-032
>gi|30688577|ref|NP_851056.1| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 306
Score = 280 bits (716), Expect = 2e-073
Identities = 171/297 (57%), Positives = 196/297 (65%), Gaps = 40/297 (13%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATID--AKKGESGLLYVTIDWKKHVIGTLSQD 714
MEFWGV V KV P+ D L+H+SQA++D K GES +L VT+ K VIGTLSQD
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 713 HIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSE---EEEVVPATST 543
PQ++FDLVF++EFELSHS +VHF+GY+SPNI+Q++ SD E E PA +
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 542 VTSVGNAAAASKAAGSIPKAKPAEVKP---------ESESDDDDESEEEKDEE------- 411
VT+ GNA AA A + PKAKPAEVKP E ESDD+DESEE+ D E
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDE 180
Query: 410 ---DDSEEED--EEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAA----TQNTEE 258
DD EEED +EEEEETPK+P EP NKKR S SKTPV KK K AA T E
Sbjct: 181 DDSDDDEEEDSEDEEEEETPKKP-EPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTE 239
Query: 257 KKKKGGHTATPHPAKKGGKSP---NQSP---GQSSDG--NKKQFNSGKQ-SGSNNKG 114
+KKKGGHTATPHPAKKGGKSP NQSP GQSS G NKK FNSGKQ GSNNKG
Sbjct: 240 EKKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSGGNNNKKPFNSGKQFGGSNNKG 296
>gi|145358319|ref|NP_197657.3| histone deacetylase HDT2 [Arabidopsis thaliana]
Length = 305
Score = 278 bits (709), Expect = 1e-072
Identities = 172/298 (57%), Positives = 196/298 (65%), Gaps = 43/298 (14%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATID--AKKGESGLLYVTIDWKKHVIGTLSQD 714
MEFWGV V KV P+ D L+H+SQA++D K GES +L VT+ K VIGTLSQD
Sbjct: 1 MEFWGVAVTPKNATKVTPEEDSLVHISQASLDCTVKSGESVVLSVTVGGAKLVIGTLSQD 60
Query: 713 HIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSE---EEEVVPATST 543
PQ++FDLVF++EFELSHS +VHF+GY+SPNI+Q++ SD E E PA +
Sbjct: 61 KFPQISFDLVFDKEFELSHSGTKANVHFIGYKSPNIEQDDFTSSDDEDVPEAVPAPAPTA 120
Query: 542 VTSVGNAAAASKAAGSIPKAKPAEVKP---------ESESDDDDESEEEKDEE------- 411
VT+ GNA AA A + PKAKPAEVKP E ESDD+DESEE+ D E
Sbjct: 121 VTANGNAGAAVVKADTKPKAKPAEVKPAEEKPESDEEDESDDEDESEEDDDSEKGMDVDE 180
Query: 410 ---DDSEEED--EEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAAT-----QNTE 261
DD EEED +EEEEETPK+P EP NKKR S SKTPV KK K AA Q TE
Sbjct: 181 DDSDDDEEEDSEDEEEEETPKKP-EPINKKRPNESVSKTPVSGKKAKPAAAPASTPQKTE 239
Query: 260 EKKKKGGHTATPHPAKKGGKSP---NQSP---GQSSDG--NKKQFNSGKQ-SGSNNKG 114
KKKGGHTATPHPAKKGGKSP NQSP GQSS G NKK FNSGKQ GSNNKG
Sbjct: 240 --KKKGGHTATPHPAKKGGKSPVNANQSPKSGGQSSGGNNNKKPFNSGKQFGGSNNKG 295
>gi|2392769|gb|AAB70032.1| putative histone deacetylase [Arabidopsis thaliana]
Length = 257
Score = 204 bits (518), Expect = 2e-050
Identities = 126/257 (49%), Positives = 164/257 (63%), Gaps = 35/257 (13%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATIDA---KKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG+EVK+G P+ V P+ LIH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVT 537
++IPQ+ DLVF++EFELSH+ GSV+FVGY++PNI+ + + EEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPA----- 115
Query: 536 SVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQP 357
GNAA A + PKAKPAEVKP + D++DES+ + +EDDS+ ED EEEE TPK+P
Sbjct: 116 --GNAAKAV----AKPKAKPAEVKP-AVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKP 168
Query: 356 EEPSNKKRATASASKTPVPAKKTKTAAT-QNTEEKKKKGGHTATPHPAKKGGKSPNQSPG 180
S+KKRA + K PV AKK K A T Q T+EK KKGGK+ NQSP
Sbjct: 169 --ASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK-------------KKGGKAANQSPK 213
Query: 179 QSSDGN----KKQFNSG 141
+S + KK FNSG
Sbjct: 214 SASQVSCGSCKKTFNSG 230
>gi|224104989|ref|XP_002313645.1| histone deacetylase [Populus trichocarpa]
Length = 275
Score = 201 bits (511), Expect = 1e-049
Identities = 123/257 (47%), Positives = 157/257 (61%), Gaps = 23/257 (8%)
Frame = -3
Query: 893 STMEFWGVEVKAGMPLKVRPQVDHLIHLSQATI-DAKKG-ESGLLYVTIDWKKHVIGTLS 720
S+MEFWGVEVKAG PLKV P+ +IHLSQA + ++KKG ES L+V D KK V+GTLS
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLS 61
Query: 719 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTV 540
++IPQ++FDLVFE+EFELSH+ + GSV F GY+ D D+ D E+ E A
Sbjct: 62 PENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFEFAKA---- 117
Query: 539 TSVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEE----------ED 390
+ AA A A K K V+P + D+DD E++ DE+ DSEE E
Sbjct: 118 -DIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDEDSDDES 176
Query: 389 EEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAK- 213
+ E+EETPK+ E ++KKRAT SA+KTPV +KK KTA Q T+ KK TPHPAK
Sbjct: 177 DSEDEETPKKAE--TSKKRATDSATKTPVSSKKAKTATPQKTDAKK---AGQVTPHPAKG 231
Query: 212 KGGKSPNQSPGQSSDGN 162
K + N S S GN
Sbjct: 232 KAAANGNSSKSPKSGGN 248
>gi|18407844|ref|NP_566872.1| histone deacetylase HDT1 [Arabidopsis thaliana]
Length = 245
Score = 199 bits (504), Expect = 8e-049
Identities = 120/243 (49%), Positives = 157/243 (64%), Gaps = 31/243 (12%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATIDA---KKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG+EVK+G P+ V P+ LIH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKSGKPVTVTPEEGILIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVT 537
++IPQ+ DLVF++EFELSH+ GSV+FVGY++PNI+ + + EEEE VPA
Sbjct: 61 ENIPQLFCDLVFDKEFELSHTWGKGSVYFVGYKTPNIEPQGYSEEEEEEEEEVPA----- 115
Query: 536 SVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQP 357
GNAA A + PKAKPAEVKP + D++DES+ + +EDDS+ ED EEEE TPK+P
Sbjct: 116 --GNAAKAV----AKPKAKPAEVKP-AVDDEEDESDSDGMDEDDSDGEDSEEEEPTPKKP 168
Query: 356 EEPSNKKRATASASKTPVPAKKTKTAAT-QNTEEKKKKGGHTATPHPAKKGGKSPNQSPG 180
S+KKRA + K PV AKK K A T Q T+EK KKGGK+ NQSP
Sbjct: 169 --ASSKKRANETTPKAPVSAKKAKVAVTPQKTDEK-------------KKGGKAANQSPK 213
Query: 179 QSS 171
+S
Sbjct: 214 SAS 216
>gi|118482036|gb|ABK92949.1| unknown [Populus trichocarpa]
Length = 275
Score = 199 bits (504), Expect = 8e-049
Identities = 122/257 (47%), Positives = 156/257 (60%), Gaps = 23/257 (8%)
Frame = -3
Query: 893 STMEFWGVEVKAGMPLKVRPQVDHLIHLSQATI-DAKKG-ESGLLYVTIDWKKHVIGTLS 720
S+MEFWGVEVKAG PLKV P+ +IHLSQA + ++KKG ES L+V D KK V+GTLS
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFCMIHLSQAALGESKKGNESVPLFVKFDEKKLVLGTLS 61
Query: 719 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTV 540
++IPQ++FDLVFE+EFELSH+ + GSV F GY+ D D+ D E+ E A
Sbjct: 62 PENIPQLSFDLVFEKEFELSHNWKKGSVFFCGYQVIPDDDASDFSGDEEDFEFAKA---- 117
Query: 539 TSVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEE----------ED 390
+ AA A A K K V+P + D+DD E++ DE+ DSEE E
Sbjct: 118 -DIMKAATAKDKAAKPEKPKATLVEPSIDDDEDDSDEDDSDEDGDSEEGMSLDEDSDDES 176
Query: 389 EEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAK- 213
+ E+EETPK+ E ++KKRAT SA+KTPV +KK KTA T+ KK TPHPAK
Sbjct: 177 DSEDEETPKKAE--TSKKRATDSATKTPVSSKKAKTATPLKTDAKK---AGQVTPHPAKG 231
Query: 212 KGGKSPNQSPGQSSDGN 162
K + N S S GN
Sbjct: 232 KAAANGNSSKSPKSGGN 248
>gi|297815600|ref|XP_002875683.1| hypothetical protein ARALYDRAFT_484880
[Arabidopsis lyrata subsp. lyrata]
Length = 247
Score = 190 bits (482), Expect = 3e-046
Identities = 111/245 (45%), Positives = 145/245 (59%), Gaps = 14/245 (5%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATIDA---KKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG+EVK G P+ V P+ LIH+SQA++ KKGE L+V + + V+GTLS
Sbjct: 1 MEFWGIEVKPGKPVTVTPKEGTLIHVSQASLGECKNKKGEFVPLHVKVGNQNLVLGTLST 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVT 537
++IPQ+ DLVFE+EFELSH+ GSV+FVGY++PNI + + EE E VPA
Sbjct: 61 ENIPQLFCDLVFEKEFELSHTWGKGSVYFVGYKTPNIKYPLNSEEEEEEVEEVPA----- 115
Query: 536 SVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQP 357
GNAA A + PKAKPAEVKP +++++DD +E DE+D ++D EEEEETP
Sbjct: 116 --GNAAKAV----AKPKAKPAEVKPVADAEEDDSDSDEMDEDDSDGDDDSEEEEETPTPK 169
Query: 356 EEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGGKSPNQSPGQ 177
+ SNKKRA +A KTPV +KK K A T K AT P S
Sbjct: 170 KPASNKKRANETAPKTPVSSKKAKVAVTPQKTGKDINTPKPATQSPKSASQVSCGSCKKT 229
Query: 176 SSDGN 162
+ GN
Sbjct: 230 FNSGN 234
>gi|118481941|gb|ABK92903.1| unknown [Populus trichocarpa]
Length = 279
Score = 190 bits (480), Expect = 5e-046
Identities = 119/271 (43%), Positives = 159/271 (58%), Gaps = 28/271 (10%)
Frame = -3
Query: 893 STMEFWGVEVKAGMPLKVRPQVDHLIHLSQATI--DAKKG-ESGLLYVTIDWKKHVIGTL 723
S+MEFWGVEVKAG PLKV P+ ++IHLSQA + +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 722 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEE--EEVVPAT 549
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E E V
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEKVENV 121
Query: 548 STVTSVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEED------------D 405
T AA K PKA P + ESDDDD S+++ DE+D D
Sbjct: 122 KFATGTDKAAKPEK-----PKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 404 SEEEDEEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATP 225
++E + E+EETPK+ E+ +KKR + SA KTPV +KK KTA Q T+ K TP
Sbjct: 176 LDDESDSEDEETPKKAEQ--SKKRTSDSAIKTPVSSKKAKTATPQKTDGGK---AGQVTP 230
Query: 224 HPAKKGGKSPNQSPGQSSDGNKKQFNSGKQS 132
HPAK S +P G S ++S
Sbjct: 231 HPAKGKAASNGNNPKTPKSGGNFSCKSCERS 261
>gi|118482528|gb|ABK93186.1| unknown [Populus trichocarpa]
Length = 279
Score = 190 bits (480), Expect = 5e-046
Identities = 119/271 (43%), Positives = 159/271 (58%), Gaps = 28/271 (10%)
Frame = -3
Query: 893 STMEFWGVEVKAGMPLKVRPQVDHLIHLSQATI--DAKKG-ESGLLYVTIDWKKHVIGTL 723
S+MEFWGVEVKAG PLKV P+ ++IHLSQA + +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 722 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEE--EEVVPAT 549
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E E V
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEKVENV 121
Query: 548 STVTSVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEED------------D 405
T AA K PKA P + ESDDDD S+++ DE+D D
Sbjct: 122 KFATGTDKAAKPEK-----PKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 404 SEEEDEEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATP 225
++E + E+EETPK+ E+ +KKR + SA KTPV +KK KTA Q T+ K TP
Sbjct: 176 LDDESDSEDEETPKKAEQ--SKKRTSDSAIKTPVSSKKAKTATPQKTDGGK---AGQVTP 230
Query: 224 HPAKKGGKSPNQSPGQSSDGNKKQFNSGKQS 132
HPAK S +P G S ++S
Sbjct: 231 HPAKGEAASNGNNPKTPKSGGNFSCKSCERS 261
>gi|224131666|ref|XP_002328078.1| histone deacetylase [Populus trichocarpa]
Length = 260
Score = 189 bits (479), Expect = 7e-046
Identities = 119/262 (45%), Positives = 157/262 (59%), Gaps = 29/262 (11%)
Frame = -3
Query: 893 STMEFWGVEVKAGMPLKVRPQVDHLIHLSQATI--DAKKG-ESGLLYVTIDWKKHVIGTL 723
S+MEFWGVEVKAG PLKV P+ ++IHLSQA + +KKG ES L++ +D KK V+GTL
Sbjct: 2 SSMEFWGVEVKAGEPLKVEPKDFYMIHLSQAALGESSKKGNESVPLFLKLDEKKLVLGTL 61
Query: 722 SQDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEE--EEVVPAT 549
S D IPQ++FDLVFE+EFELSH+ ++GSV F GY++ + + D+ D +E E V
Sbjct: 62 SPDKIPQLSFDLVFEREFELSHNWKNGSVFFCGYQAAIPENDSDFSDDGDEIPFEKVENV 121
Query: 548 STVTSVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEED------------D 405
T AA K PKA P + ESDDDD S+++ DE+D D
Sbjct: 122 KFATGTDKAAKPEK-----PKANPVVPSKDDESDDDD-SDDDSDEDDSGDGSEGMSLEED 175
Query: 404 SEEEDEEEEEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATP 225
++E + E+EETPK+ E+ +KKR + SA KTPV +KK KTA Q T+ K TP
Sbjct: 176 LDDESDSEDEETPKKAEQ--SKKRTSDSAIKTPVSSKKAKTATPQKTDGGK---AGQVTP 230
Query: 224 HPAK-KGGKSPNQSPGQSSDGN 162
HPAK K + N S GN
Sbjct: 231 HPAKGKAASNGNNPKTPKSGGN 252
>gi|269969916|gb|ACZ54947.1| type 2 histone deacetylase c [Nicotiana tabacum]
Length = 282
Score = 188 bits (476), Expect = 1e-045
Identities = 111/254 (43%), Positives = 157/254 (61%), Gaps = 22/254 (8%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATIDAKKGESG----LLYVTIDWKKHVIGTLS 720
MEFWG EVK+G PL V+P D ++HLSQA++ K + G L V +D KK +GTL+
Sbjct: 1 MEFWGAEVKSGQPLTVQPGDDMVLHLSQASLGEAKKDKGSEPVCLSVNVDGKKLALGTLN 60
Query: 719 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSDSEEEEVVPATST 543
D +PQ FDLVF+++FELSH+ ++GSV+F GY++ N +QEED + E +E +P T
Sbjct: 61 LDKLPQQQFDLVFDRDFELSHNWKNGSVYFFGYKAANPYEQEED---EDESDEEIPLTLA 117
Query: 542 VTSVGNA-AAASKAAGSIPKAKPAEVKPESESDDDDESEEE----KDEEDDSEEEDEEE- 381
T A A+A+ +A K K AE ++++DD+D+S +E +DEED EDE++
Sbjct: 118 NTGKSEAKASANDSASGKQKVKIAEPSKDAKADDEDDSSDEDDTSEDEEDSEMGEDEDDS 177
Query: 380 -----EEETPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPA 216
+EETPK+ E +KKR + SA KTP P KK K A Q T + KK H ATPHP+
Sbjct: 178 DEDQSDEETPKKAE--PSKKRPSDSAIKTPAPDKKAKFATPQKT-DGKKGAVHVATPHPS 234
Query: 215 KKGGKSPNQSPGQS 174
K+ GK+ Q+
Sbjct: 235 KQAGKTSGNKSNQT 248
>gi|73919938|sp|Q6V9I6.1|HDT1_SOLCH RecName: Full=Histone deacetylase HDT1;
AltName: Full=Histone deacetylase 2a; Short=HD2a; AltName: Full=ScHD2a
Length = 269
Score = 184 bits (466), Expect = 2e-044
Identities = 112/267 (41%), Positives = 158/267 (59%), Gaps = 11/267 (4%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQAT---IDAKKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG EVK+G PL V+P ++HLSQA+ + K ES L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSD-SEEEEVVPATST 543
+ +PQ FDLVF+++FELSH+L+SGSV+F GY++ N ++EED D E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120
Query: 542 VTSVGNAAAASKA-AGSIPKAKPAEVK-PESESDDDDESEEEKDEEDDSEEED-EEEEEE 372
+ A K+ AG + +V+ E DD+DES ++ D + +E+D ++ EEE
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSDMGEDEDDSDDSEEE 180
Query: 371 TPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGGKSPN 192
TPK+ E K+R SA+KTPV KK K Q T + KK GGH ATPHP+K+ K+P
Sbjct: 181 TPKKAEPA--KRRKADSATKTPVTDKKAKLTTPQKT-DGKKGGGHVATPHPSKQASKTPK 237
Query: 191 QSPGQSSDGNKKQFNSGKQSGSNNKGK 111
+ + F S S++K K
Sbjct: 238 SAGSHHCKPCNRSFGSEGALDSHSKAK 264
>gi|297808263|ref|XP_002872015.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 307
Score = 177 bits (447), Expect = 3e-042
Identities = 107/263 (40%), Positives = 149/263 (56%), Gaps = 14/263 (5%)
Frame = -3
Query: 881 FWGVEVKAGMPLKVRPQVDHLIHLSQATID--AKKGESGLLYVTIDWKKHVIGTLSQDHI 708
+ G+EVK G P KV P+ D L+H+SQA++D K GES +L VT+D K VIGTLSQ+
Sbjct: 9 YLGIEVKPGKPTKVTPEEDSLVHISQASLDCKVKSGESVVLTVTVDGTKLVIGTLSQEKF 68
Query: 707 PQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEV-------VPAT 549
PQ++FDLVFE+EFE+SH+ G+VHFVGYRSPNID EDY S SEEE+V VPA
Sbjct: 69 PQISFDLVFEREFEISHNGTKGTVHFVGYRSPNID-HEDYTS-SEEEDVPEAVPAPVPAA 126
Query: 548 STVT-SVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEE 372
V S G AA+ A S PKAKPAEVKP + ++ E+ DEED+S ++D+ E+
Sbjct: 127 VAVNGSAGAAASNVVKADSKPKAKPAEVKPAEVKPESEDDEDSSDEEDESADDDDSEKGM 186
Query: 371 TPKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGGKSPN 192
+ + + + +TP + + K G A PA +P
Sbjct: 187 DVDEDDSDDEEDESEEEEEETPKKPEPINKKRPNESTSKTPVSGKKA--KPAAAPAATPQ 244
Query: 191 QSPGQSSDGNKKQFNSGKQSGSN 123
++ + G+ + K+SG +
Sbjct: 245 KTEEKKKGGHTATPHPAKKSGKS 267
>gi|255573038|ref|XP_002527449.1| Histone deacetylase 2a, putative [Ricinus
communis]
Length = 310
Score = 150 bits (377), Expect = 4e-034
Identities = 87/269 (32%), Positives = 147/269 (54%), Gaps = 8/269 (2%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATIDAKKGESG----LLYVTIDWKKHVIGTLS 720
MEFWGVE+KAG LKV P + LIHLSQA + K E G LYV +D KK ++GTLS
Sbjct: 1 MEFWGVEIKAGETLKVEPNPESLIHLSQAALGESKKEKGNESVPLYVKVDNKKIILGTLS 60
Query: 719 QDHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPS--DSEEEEVVPATS 546
Q++ PQ+ FD+VFE+E ELSH+ ++GSV+ GY++P + +E+D S +S++EE +P +
Sbjct: 61 QENFPQIAFDIVFEKEVELSHNWKNGSVYLSGYQTP-LPEEDDMFSEEESDDEEPLPLVN 119
Query: 545 TVTSVGNAAAASKAAGSIPKAKP-AEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEET 369
A KAA AKP + K +++ ++EE D++D+S+++D++E+++
Sbjct: 120 ADNGGIQLAGTQKAAAKSNIAKPESSTKQKAKPVQPSKAEEASDDDDESDDDDDDEDDDE 179
Query: 368 PKQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGGKSPNQ 189
+ +E +++ + +++ T +K KK + + K+
Sbjct: 180 DESDDEDESEEGMSVDEDSDDEGDSESEDEETPKKADKGKKRQNDSAVKTPVSSKKAKLI 239
Query: 188 SPGQSSDGNKKQFNSGKQSGSNNKGKGKG 102
+P +++DG K + K G
Sbjct: 240 TPQKTADGKKGGHTATPHPAKGAKASANG 268
>gi|81074563|gb|ABB55369.1| histone deacetylase 2a-like [Solanum tuberosum]
Length = 203
Score = 148 bits (373), Expect = 1e-033
Identities = 90/203 (44%), Positives = 127/203 (62%), Gaps = 10/203 (4%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQAT---IDAKKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG EVK+G PL V+P ++HLSQA+ + K ES L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKSESVCLSVNIDGKKLVLGTLNS 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPN-IDQEEDYPSD-SEEEEVVPATST 543
+ +PQ FDLVF+++FELSH+L+SGSV+F GY++ N ++EED D E +E +P T
Sbjct: 61 EKVPQQQFDLVFDRDFELSHNLKSGSVYFFGYKATNPFEEEEDDEDDYDESDEDIPLTLA 120
Query: 542 VTSVGNAAAASKA-AGSIPKAKPAEVK-PESESDDDDESEEEKDEE-DDSEEEDEEEEEE 372
+ A K+ AG + +V+ E DD+DES ++ D E + E++ ++ EEE
Sbjct: 121 NSGKPEPKEAGKSNAGKDSASGKQKVRIVEPTKDDEDESSDDDDSELGEDEDDSDDSEEE 180
Query: 371 TPKQPEEPSNKKRATASASKTPV 303
TPK+ E KKR SA+KTPV
Sbjct: 181 TPKKAEPA--KKRKADSATKTPV 201
>gi|269969912|gb|ACZ54945.1| type 2 histone deacetylase a [Nicotiana tabacum]
Length = 295
Score = 148 bits (372), Expect = 2e-033
Identities = 95/268 (35%), Positives = 138/268 (51%), Gaps = 16/268 (5%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQAT---IDAKKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG EVK+G PL V+P ++HLSQA+ + K +S L V ID KK V+GTLS
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKAQSVCLSVNIDGKKLVLGTLSS 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVT 537
D +PQ FDLVF+++FELSH+ +SGSV+F GY++ N +EE+ D EEE T+
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKSGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 536 SVGNAAAASKAAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETPKQP 357
+ G A K A AK + + + + + D+ED+S +EDE E+E
Sbjct: 121 NNGKPEAKVKEAEKSNVAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDMG 180
Query: 356 E---EPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGG-KSPNQ 189
E E + +TP A+ K K+K T TP P KK +P +
Sbjct: 181 EGEDESDGDDESDEGEEETPKKAEPGK---------KRKADSATKTPVPDKKAKFVTPQK 231
Query: 188 SPGQSSDGNKKQFNSGKQSGSNNKGKGK 105
+ G+ G+ + KQ+G + K +
Sbjct: 232 TDGKKGSGHVATPHPSKQAGKSPANKNQ 259
>gi|73919943|sp|Q9M4U4.1|HDT3_MAIZE RecName: Full=Histone deacetylase HDT3;
AltName: Full=Histone deacetylase 2c; Short=HD2c; AltName:
Full=Zm-HD2c
Length = 300
Score = 145 bits (364), Expect = 1e-032
Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 9/238 (3%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATI-DAKKGESGLLYVTIDWKKHVIGTLSQDH 711
MEFWG+EVK G +K P ++HLSQA + ++KK ++ L+YV ID +K IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 710 IPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVTSV 531
P + FDL+F++EFELSH+ ++ SV F GY+ +E++ DSE+E+ V
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPAVKEN 120
Query: 530 GNAAAASKAAGSIPKAKPAEVKPES-ESDDDDESEEEKDEEDDSEEEDEEEEEETPKQPE 354
G A + + A P++ P+S +S DDD+S+E++ ++ D +E D+ +E +P++ +
Sbjct: 121 GKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPEEGD 180
Query: 353 EPSNKKRATASASKTPVPAKKTKTAATQNTEEK-------KKKGGHTATPHPAKKGGK 201
+ S+ + T+ + P K + E K ATP K GGK
Sbjct: 181 DDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGK 238
>gi|195606718|gb|ACG25189.1| histone deacetylase 2b [Zea mays]
Length = 300
Score = 145 bits (364), Expect = 1e-032
Identities = 82/238 (34%), Positives = 131/238 (55%), Gaps = 9/238 (3%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATI-DAKKGESGLLYVTIDWKKHVIGTLSQDH 711
MEFWG+EVK G +K P ++HLSQA + ++KK ++ L+YV ID +K IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGYGFVLHLSQAALGESKKSDNALMYVKIDDQKLAIGTLSVDK 60
Query: 710 IPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVTSV 531
P + FDL+F++EFELSH+ ++ SV F GY+ +E++ DSE+E+ V
Sbjct: 61 NPHIQFDLIFDKEFELSHTSKTTSVFFTGYKVEQPFEEDEMDLDSEDEDEELNVPVVKEN 120
Query: 530 GNAAAASKAAGSIPKAKPAEVKPES-ESDDDDESEEEKDEEDDSEEEDEEEEEETPKQPE 354
G A + + A P++ P+S +S DDD+S+E++ ++ D +E D+ +E +P++ +
Sbjct: 121 GKADEKKQKSQEKAVAAPSKSSPDSKKSKDDDDSDEDETDDSDEDETDDSDEGLSPEEGD 180
Query: 353 EPSNKKRATASASKTPVPAKKTKTAATQNTEEK-------KKKGGHTATPHPAKKGGK 201
+ S+ + T+ + P K + E K ATP K GGK
Sbjct: 181 DDSSDEDDTSDDEEEDTPTPKKPEVGKKRAAESSVLKTPLSDKKAKVATPSSQKTGGK 238
>gi|269969914|gb|ACZ54946.1| type 2 histone deacetylase b [Nicotiana tabacum]
Length = 294
Score = 145 bits (364), Expect = 1e-032
Identities = 90/267 (33%), Positives = 138/267 (51%), Gaps = 15/267 (5%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQAT---IDAKKGESGLLYVTIDWKKHVIGTLSQ 717
MEFWG EVK+G PL V+P ++HLSQA+ + K +S L V ID KK V+GTL+
Sbjct: 1 MEFWGAEVKSGEPLTVQPGDGMVLHLSQASLGELKKDKVQSVCLSVNIDGKKLVLGTLNS 60
Query: 716 DHIPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVT 537
D +PQ FDLVF+++FELSH+ ++GSV+F GY++ N +EE+ D EEE T+
Sbjct: 61 DKVPQQQFDLVFDRDFELSHNWKNGSVYFFGYKATNPFEEEEDDEDDEEESDEDIPLTIA 120
Query: 536 SVGNAAAASKAAGSIPKAKPA---EVKPESESDDDDESEEEKDEEDDSEEEDEEEEEETP 366
+ G A K A AK + + K + D +++DE D +E E+E+ +
Sbjct: 121 NNGKPEAKVKEAEKSNAAKDSASGKQKVKIVEPSKDAKADDEDESTDEDEMSEDEDSDVG 180
Query: 365 KQPEEPSNKKRATASASKTPVPAKKTKTAATQNTEEKKKKGGHTATPHPAKKGGKSPNQS 186
+ +E + S +TP A+ K K+K T TP K +P ++
Sbjct: 181 EGEDESDEDDESDESEEETPKKAEPGK---------KRKADSATKTPADKKAKFVTPQKT 231
Query: 185 PGQSSDGNKKQFNSGKQSGSNNKGKGK 105
G+ G+ + KQ+G + K +
Sbjct: 232 DGKKGSGHVATPHPSKQAGKSPANKNQ 258
>gi|194694834|gb|ACF81501.1| unknown [Zea mays]
Length = 303
Score = 144 bits (361), Expect = 3e-032
Identities = 96/278 (34%), Positives = 144/278 (51%), Gaps = 25/278 (8%)
Frame = -3
Query: 887 MEFWGVEVKAGMPLKVRPQVDHLIHLSQATI-DAKKGESGLLYVTIDWKKHVIGTLSQDH 711
MEFWG+EVK G +K P ++H+SQA + ++KK +S L+YV +D KK IGTLS D
Sbjct: 1 MEFWGLEVKPGSTVKCEPGHGFILHVSQAALGESKKSDSALMYVKVDDKKLAIGTLSIDK 60
Query: 710 IPQMTFDLVFEQEFELSHSLESGSVHFVGYRSPNIDQEEDYPSDSEEEEVVPATSTVTSV 531
PQ+ FDLVF +EFELSH+ ++ SV F GY+ + ++ DSE+EE +
Sbjct: 61 YPQIQFDLVFNKEFELSHTSKTTSVFFSGYKVEQPIEGDEMDLDSEDEEEELNIPVIKEN 120
Query: 530 GNAAAASK--------AAGSIPKAKPAEVKPESESDDDDESEEEKDEEDDSEEEDEEEEE 375
G A + AA + + E K + +SDD DE E + +EDDS++ D E E
Sbjct: 121 GKADGKEEQKNQEKAVAATASKSSLGLEKKSKDDSDDSDEDESDDSDEDDSDDSD-EGEG 179
Query: 374 ETPKQPEEPSNKKRATA--SASKTPVPAKKTKTAATQNTEEKKK-----KGGHTATPHPA 216
+P + ++ S+ + T+ +TP P KK + + E K K ATP
Sbjct: 180 LSPDEGDDDSSDEDDTSDDDEEETPTP-KKPEAGKKRGAENALKTPLSDKKAKVATPPAQ 238
Query: 215 KKGGK-------SPNQSPGQSSDGNKKQFNSGKQSGSN 123
K GGK +P+ + G++ N K +SG +
Sbjct: 239 KTGGKKGATHVATPHPAKGKTPANNDKSTEKSPKSGGS 276
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,349,682,561,373
Number of Sequences: 15229318
Number of Extensions: 5349682561373
Number of Successful Extensions: 1234775341
Number of sequences better than 0.0: 0
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