BLASTX 7.6.2
Query= UN49356 /QuerySize=951
(950 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligas... 236 2e-062
TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligas... 236 2e-062
TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type... 212 3e-055
TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type... 141 6e-034
>TAIR9_protein||AT3G29270.1 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 236 bits (601), Expect = 2e-062
Identities = 127/265 (47%), Positives = 167/265 (63%), Gaps = 23/265 (8%)
Frame = -1
Query: 932 MWSFASNVIGSIGGLKKD--HPPPPQPSCSDDDEVSNVSRDEDEEEEEEQGLDCPICFES 759
MW+ AS+ + G K D P CSDDD S S+DE GL+CPIC+ES
Sbjct: 9 MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDE--------GLECPICWES 60
Query: 758 FNIVENVPYVLWCGHTLCQNCVFSLRPPVLLTLSGRDVRLPFLVSCPWCQLLSFRVVYDG 579
FNIVENVPYVLWCGHT+C+NC+ L+ ++ L V+LP +SCPWC LLSFR+V+ G
Sbjct: 61 FNIVENVPYVLWCGHTMCKNCILGLQ-WAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRG 119
Query: 578 VLKFPKKNFFLLWMVESLNGD-RSRRHGTGSDDNHQY-------CNNNLIAR----PPVV 435
L+FP KN+F+LWMVE +NG+ R+ G +D N+ + C +N R P
Sbjct: 120 TLRFPHKNYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRS 179
Query: 434 VVGRREPSSRQQFSFHKSIDFFISFTSKFPFVVVFLLIVFFAIPGSLVVLALYFLLTILL 255
V R P Q S KS+ FF+ T+KFP VV+FLLI+ +AIP S +LA+Y L+T+LL
Sbjct: 180 VNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLL 239
Query: 254 AVPSGLVLYFAYPILERLVHEITS* 180
A+PS L+LYFAYP L+ LV EI +*
Sbjct: 240 ALPSFLILYFAYPCLDWLVREIVT* 264
>TAIR9_protein||AT3G29270.2 | Symbols: | ubiquitin-protein ligase |
chr3:11235326-11236117 FORWARD
Length = 264
Score = 236 bits (601), Expect = 2e-062
Identities = 127/265 (47%), Positives = 167/265 (63%), Gaps = 23/265 (8%)
Frame = -1
Query: 932 MWSFASNVIGSIGGLKKD--HPPPPQPSCSDDDEVSNVSRDEDEEEEEEQGLDCPICFES 759
MW+ AS+ + G K D P CSDDD S S+DE GL+CPIC+ES
Sbjct: 9 MWNLASSYLTGNIGPKNDIRRPVHAHAECSDDDVSSVGSKDE--------GLECPICWES 60
Query: 758 FNIVENVPYVLWCGHTLCQNCVFSLRPPVLLTLSGRDVRLPFLVSCPWCQLLSFRVVYDG 579
FNIVENVPYVLWCGHT+C+NC+ L+ ++ L V+LP +SCPWC LLSFR+V+ G
Sbjct: 61 FNIVENVPYVLWCGHTMCKNCILGLQ-WAIVKLPTHPVQLPLFISCPWCNLLSFRLVFRG 119
Query: 578 VLKFPKKNFFLLWMVESLNGD-RSRRHGTGSDDNHQY-------CNNNLIAR----PPVV 435
L+FP KN+F+LWMVE +NG+ R+ G +D N+ + C +N R P
Sbjct: 120 TLRFPHKNYFVLWMVERMNGERRNSPGGAQTDGNNDHTRETPSPCLHNRHHRSQPEPSRS 179
Query: 434 VVGRREPSSRQQFSFHKSIDFFISFTSKFPFVVVFLLIVFFAIPGSLVVLALYFLLTILL 255
V R P Q S KS+ FF+ T+KFP VV+FLLI+ +AIP S +LA+Y L+T+LL
Sbjct: 180 VNDHRIPRDNIQTSLRKSLVFFVQLTAKFPLVVIFLLIILYAIPTSAAILAMYILVTLLL 239
Query: 254 AVPSGLVLYFAYPILERLVHEITS* 180
A+PS L+LYFAYP L+ LV EI +*
Sbjct: 240 ALPSFLILYFAYPCLDWLVREIVT* 264
>TAIR9_protein||AT1G69330.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:26064138-26064950 REVERSE
Length = 271
Score = 212 bits (539), Expect = 3e-055
Identities = 115/184 (62%), Positives = 129/184 (70%), Gaps = 31/184 (16%)
Frame = -1
Query: 932 MWSFASNVIGSIGGLKKDHPPPPQPS--CSDDDEVSNVSRDEDEEEEEEQGLDCPICFES 759
MW FASNVIGS+ GLKK Q S CS DDEVSN+SRD E+GL+CPIC+ES
Sbjct: 1 MWGFASNVIGSM-GLKKSPKDSAQASSQCS-DDEVSNISRD-------EEGLECPICWES 51
Query: 758 FNIVENVPYVLWCGHTLCQNCVFSLRPPVLLTLSGRDVRLPFLVSCPWCQLLSFRVVYDG 579
FNIVENVPYVLWCGHTLCQNCVF L+ V L LS +D+R+PF VSCPWCQLLSFR+VY G
Sbjct: 52 FNIVENVPYVLWCGHTLCQNCVFGLQSAV-LRLSSQDIRIPFFVSCPWCQLLSFRIVYKG 110
Query: 578 VLKFPKKNFFLLWMVESLNGDRSRR-----HGTGSDDNHQYC--------------NNNL 456
LKFP+KNFFLLWMVESLNGDR+ HG+ DN Q NNNL
Sbjct: 111 NLKFPRKNFFLLWMVESLNGDRTSHGDRTSHGSLVTDNQQSAPTPRCSMSLGNHSSNNNL 170
Query: 455 IARP 444
+ARP
Sbjct: 171 VARP 174
Score = 138 bits (347), Expect = 5e-033
Identities = 67/76 (88%), Positives = 74/76 (97%)
Frame = -1
Query: 410 SRQQFSFHKSIDFFISFTSKFPFVVVFLLIVFFAIPGSLVVLALYFLLTILLAVPSGLVL 231
SRQ FSFHKS+DFFISFTSKFPFV++FLLIVFFAIPGSL++LALYFLLTIL AVP+GLVL
Sbjct: 194 SRQLFSFHKSLDFFISFTSKFPFVIIFLLIVFFAIPGSLIILALYFLLTILFAVPAGLVL 253
Query: 230 YFAYPILERLVHEITS 183
YFAYPILERLV+EITS
Sbjct: 254 YFAYPILERLVNEITS 269
>TAIR9_protein||AT1G74370.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr1:27958200-27958985 REVERSE
Length = 262
Score = 141 bits (355), Expect = 6e-034
Identities = 60/117 (51%), Positives = 84/117 (71%), Gaps = 6/117 (5%)
Frame = -1
Query: 797 EEQGLDCPICFESFNIVENVPYVLWCGHTLCQNCVFSLRPPVLLTLSGRDVRLPFLVSCP 618
+E+ L+CPIC+ESFN+VENVPYVLWCGHT+C+ C+ L+ +++ S +LPF V+CP
Sbjct: 40 KEEKLECPICWESFNVVENVPYVLWCGHTICKYCLLGLQRAIVIKSSALPFQLPFFVACP 99
Query: 617 WCQLLSFRVVYDGVLKFPKKNFFLLWMVESLNGDRS------RRHGTGSDDNHQYCN 465
WC +LS R+V +G ++FP KNF+LLWMVES+NG RS +R +G D C+
Sbjct: 100 WCNILSLRLVCNGTIRFPSKNFYLLWMVESMNGSRSEAPSDNKRVASGQRDLRNRCD 156
Score = 72 bits (174), Expect = 6e-013
Identities = 37/78 (47%), Positives = 48/78 (61%)
Frame = -1
Query: 413 SSRQQFSFHKSIDFFISFTSKFPFVVVFLLIVFFAIPGSLVVLALYFLLTILLAVPSGLV 234
+ R S KS+ +KFP VV+FLL+ +AIP S VL +YF +T LAVPS LV
Sbjct: 185 TGRLHDSVRKSMALVAHLLAKFPLVVIFLLMALYAIPVSAAVLGVYFFVTFALAVPSFLV 244
Query: 233 LYFAYPILERLVHEITS* 180
LYFA+P L L+ EI +*
Sbjct: 245 LYFAFPSLNWLIREIAT* 262
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,478,492,764
Number of Sequences: 33410
Number of Extensions: 23478492764
Number of Successful Extensions: 739753858
Number of sequences better than 0.0: 0
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