Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN49450


BLASTX 7.6.2

Query= UN49450 /QuerySize=729
        (728 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297829270|ref|XP_002882517.1| zinc finger family protein [Ara...    127   2e-027
gi|26451887|dbj|BAC43036.1| putative RING finger protein [Arabid...    126   4e-027
gi|15231414|ref|NP_187376.1| RING/U-box domain-containing protei...    126   4e-027
gi|18422940|ref|NP_568701.1| RING/U-box domain-containing protei...    115   9e-024
gi|21954077|gb|AAK76707.2| unknown protein [Arabidopsis thaliana]      115   9e-024
gi|21537318|gb|AAM61659.1| unknown [Arabidopsis thaliana]              115   9e-024
gi|297795545|ref|XP_002865657.1| hypothetical protein ARALYDRAFT...    114   2e-023
gi|255629089|gb|ACU14889.1| unknown [Glycine max]                      112   5e-023
gi|224065401|ref|XP_002301799.1| predicted protein [Populus tric...    101   2e-019
gi|255584000|ref|XP_002532746.1| RING finger protein, putative [...     96   6e-018
gi|225468779|ref|XP_002262663.1| PREDICTED: hypothetical protein...     92   5e-017
gi|296080870|emb|CBI18799.3| unnamed protein product [Vitis vini...     92   5e-017
gi|217070974|gb|ACJ83847.1| unknown [Medicago truncatula]               91   2e-016
gi|217075410|gb|ACJ86065.1| unknown [Medicago truncatula]               91   2e-016
gi|255647385|gb|ACU24158.1| unknown [Glycine max]                       89   7e-016
gi|242055393|ref|XP_002456842.1| hypothetical protein SORBIDRAFT...     87   2e-015
gi|224132232|ref|XP_002321288.1| predicted protein [Populus tric...     87   3e-015
gi|225433465|ref|XP_002263351.1| PREDICTED: hypothetical protein...     83   3e-014
gi|224075260|ref|XP_002304583.1| predicted protein [Populus tric...     82   9e-014
gi|308080596|ref|NP_001183915.1| hypothetical protein LOC1005025...     80   3e-013

>gi|297829270|ref|XP_002882517.1| zinc finger family protein [Arabidopsis lyrata
        subsp. lyrata]

          Length = 181

 Score =  127 bits (318), Expect = 2e-027
 Identities = 67/124 (54%), Positives = 83/124 (66%), Gaps = 4/124 (3%)
 Frame = -2

Query: 697 IDVDAIE--DDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQP 524
           +++ AIE  DDVVES+AS FA+A +KS  ARR      VESGG  R   ++RR    +  
Sbjct:  45 VNIVAIEDDDDVVESTASAFAQAKNKSRSARRGPVVVDVESGGTNR--GTRRRSDQTSAD 102

Query: 523 VIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPT 344
            ++      +    PP EEPKF+CPIC+C FTEEVSTKCGHIFCK CI+ A+S Q KCPT
Sbjct: 103 SVELNKPRKSKAVAPPVEEPKFNCPICLCPFTEEVSTKCGHIFCKACIKNALSLQAKCPT 162

Query: 343 CRKK 332
           CRKK
Sbjct: 163 CRKK 166

>gi|26451887|dbj|BAC43036.1| putative RING finger protein [Arabidopsis
        thaliana]

          Length = 182

 Score =  126 bits (315), Expect = 4e-027
 Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
 Frame = -2

Query: 697 IDVDAIE--DDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQP 524
           I+V AIE  DDVVES+AS FA+A +KS  ARR      VES G  R   ++RR    +  
Sbjct:  46 INVVAIEDDDDVVESTASAFAQAKNKSRSARRGSQVVDVESAGANR--STRRRSDQTSVD 103

Query: 523 VIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPT 344
            ++      +    PP EEPKFSCPIC+C FT+EVSTKCGHIFCK CI+ A+S Q KCPT
Sbjct: 104 SVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPT 163

Query: 343 CRKK 332
           CRKK
Sbjct: 164 CRKK 167

>gi|15231414|ref|NP_187376.1| RING/U-box domain-containing protein [Arabidopsis
        thaliana]

          Length = 182

 Score =  126 bits (315), Expect = 4e-027
 Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
 Frame = -2

Query: 697 IDVDAIE--DDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQP 524
           I+V AIE  DDVVES+AS FA+A +KS  ARR      VES G  R   ++RR    +  
Sbjct:  46 INVVAIEDDDDVVESTASAFAQAKNKSRSARRGSQVVDVESAGANR--STRRRSDQTSVD 103

Query: 523 VIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPT 344
            ++      +    PP EEPKFSCPIC+C FT+EVSTKCGHIFCK CI+ A+S Q KCPT
Sbjct: 104 SVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPT 163

Query: 343 CRKK 332
           CRKK
Sbjct: 164 CRKK 167

>gi|18422940|ref|NP_568701.1| RING/U-box domain-containing protein [Arabidopsis
        thaliana]

          Length = 203

 Score =  115 bits (286), Expect = 9e-024
 Identities = 48/58 (82%), Positives = 53/58 (91%)
 Frame = -2

Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           VS +  P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188

>gi|21954077|gb|AAK76707.2| unknown protein [Arabidopsis thaliana]

          Length = 192

 Score =  115 bits (286), Expect = 9e-024
 Identities = 48/58 (82%), Positives = 53/58 (91%)
 Frame = -2

Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           VS +  P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 120 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 177

>gi|21537318|gb|AAM61659.1| unknown [Arabidopsis thaliana]

          Length = 203

 Score =  115 bits (286), Expect = 9e-024
 Identities = 48/58 (82%), Positives = 53/58 (91%)
 Frame = -2

Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           VS +  P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188

>gi|297795545|ref|XP_002865657.1| hypothetical protein ARALYDRAFT_494930
        [Arabidopsis lyrata subsp. lyrata]

          Length = 203

 Score =  114 bits (283), Expect = 2e-023
 Identities = 47/58 (81%), Positives = 53/58 (91%)
 Frame = -2

Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           +S +  P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 MSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188

>gi|255629089|gb|ACU14889.1| unknown [Glycine max]

          Length = 205

 Score =  112 bits (280), Expect = 5e-023
 Identities = 66/134 (49%), Positives = 80/134 (59%), Gaps = 15/134 (11%)
 Frame = -2

Query: 700 MIDVDAIEDDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQPV 521
           MIDV+AI+DDVVE +   FAEA + S   RRR   D V+    TR   +KRR   PN  +
Sbjct:  61 MIDVEAIDDDVVECTPRAFAEAKNNSRRVRRRTIVD-VDLEDQTR--RNKRRRELPNL-I 116

Query: 520 IDCEDV-----------SPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQM 374
           I+C+                  PP PP+E  F+CPICM     E+ST+CGHIFCK CI+ 
Sbjct: 117 INCDKYINLEGGSSSMEQSFKKPPEPPKELVFNCPICMGPMVHEMSTRCGHIFCKDCIKA 176

Query: 373 AISKQGKCPTCRKK 332
           AIS QGKCPTCRKK
Sbjct: 177 AISAQGKCPTCRKK 190

>gi|224065401|ref|XP_002301799.1| predicted protein [Populus trichocarpa]

          Length = 209

 Score =  101 bits (249), Expect = 2e-019
 Identities = 56/128 (43%), Positives = 70/128 (54%), Gaps = 6/128 (4%)
 Frame = -2

Query: 697 IDVDAIEDDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQPVI 518
           IDVDAI+DDV+ESS   FA+A + S  A       G       R      + +      I
Sbjct:  67 IDVDAIDDDVIESSPRAFAQAKNNSRRALVVDVESGGRFTHNKRRRVPPNQTIINCDLYI 126

Query: 517 DCEDVSPTPPPPP------PPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQG 356
           + E  S +           PP+EP F+CPIC+C   EE+STKCGHIFCK CI  AI +Q 
Sbjct: 127 NLEGGSSSSSSKRENVQTLPPKEPTFNCPICLCPLVEEMSTKCGHIFCKACISDAIKRQA 186

Query: 355 KCPTCRKK 332
           KCPTCRK+
Sbjct: 187 KCPTCRKR 194

>gi|255584000|ref|XP_002532746.1| RING finger protein, putative [Ricinus
        communis]

          Length = 224

 Score =  96 bits (236), Expect = 6e-018
 Identities = 39/54 (72%), Positives = 43/54 (79%)
 Frame = -2

Query: 493 PPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           P PPPPP+EP F+CPICM  F EE STKCGHIFCK CI+ AI  Q KCPTCRK+
Sbjct: 154 PRPPPPPKEPTFNCPICMGPFIEETSTKCGHIFCKACIKTAIGVQSKCPTCRKR 207

>gi|225468779|ref|XP_002262663.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 209

 Score =  92 bits (228), Expect = 5e-017
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -2

Query: 487 PPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           PP PP+EP F+CPICM Q  +E+STKCGHIFCK CI+ AIS QGKCPTCRK+
Sbjct: 143 PPLPPKEPTFNCPICMGQLVDEMSTKCGHIFCKMCIKAAISAQGKCPTCRKR 194

>gi|296080870|emb|CBI18799.3| unnamed protein product [Vitis vinifera]

          Length = 163

 Score =  92 bits (228), Expect = 5e-017
 Identities = 38/52 (73%), Positives = 44/52 (84%)
 Frame = -2

Query: 487 PPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           PP PP+EP F+CPICM Q  +E+STKCGHIFCK CI+ AIS QGKCPTCRK+
Sbjct:  97 PPLPPKEPTFNCPICMGQLVDEMSTKCGHIFCKMCIKAAISAQGKCPTCRKR 148

>gi|217070974|gb|ACJ83847.1| unknown [Medicago truncatula]

          Length = 247

 Score =  91 bits (223), Expect = 2e-016
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = -2

Query: 487 PPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           PP PP+EP F+CPICM    EE+ST+CGHIFCK CI+ AIS Q KCPTCRKK
Sbjct: 181 PPEPPKEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKK 232

>gi|217075410|gb|ACJ86065.1| unknown [Medicago truncatula]

          Length = 242

 Score =  91 bits (223), Expect = 2e-016
 Identities = 37/52 (71%), Positives = 42/52 (80%)
 Frame = -2

Query: 487 PPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           PP PP+EP F+CPICM    EE+ST+CGHIFCK CI+ AIS Q KCPTCRKK
Sbjct: 176 PPEPPKEPVFTCPICMGPMVEEMSTRCGHIFCKSCIKAAISAQAKCPTCRKK 227

>gi|255647385|gb|ACU24158.1| unknown [Glycine max]

          Length = 206

 Score =  89 bits (218), Expect = 7e-016
 Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 3/63 (4%)
 Frame = -2

Query: 511 EDVSPTPPPPPPPEEPK---FSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTC 341
           E+   TP PP  PE PK   F+CPICM    EE+ST+CGHIFCK CI+ AI  Q KCPTC
Sbjct: 129 ENAKKTPEPPKEPEAPKEPVFNCPICMSPLVEEMSTRCGHIFCKNCIRAAIFAQAKCPTC 188

Query: 340 RKK 332
           RKK
Sbjct: 189 RKK 191

>gi|242055393|ref|XP_002456842.1| hypothetical protein SORBIDRAFT_03g043910
        [Sorghum bicolor]

          Length = 242

 Score =  87 bits (215), Expect = 2e-015
 Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
 Frame = -2

Query: 568 RLSPSKRRGVPPNQPVIDCEDVSPTPPPPPP----PEEPKFSCPICMCQFTEEVSTKCGH 401
           R  P +     P   ++D  +V+    PP P    P+EPKFSCPICM + TE  ST CGH
Sbjct: 145 RHEPPRATNARPVISIVDTPEVNTFKAPPEPVKEVPKEPKFSCPICMNELTEAASTVCGH 204

Query: 400 IFCKGCIQMAISKQGKCPTCRKK 332
           IFC+ CI+ AI  Q KCPTCR++
Sbjct: 205 IFCQKCIKAAIQAQKKCPTCRRR 227

>gi|224132232|ref|XP_002321288.1| predicted protein [Populus trichocarpa]

          Length = 213

 Score =  87 bits (213), Expect = 3e-015
 Identities = 34/49 (69%), Positives = 40/49 (81%)
 Frame = -2

Query: 478 PPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           PP+EP F+CPIC+C   EE+STKCGHIFCK CI  AI +Q KCPTCRK+
Sbjct: 150 PPKEPTFNCPICLCPLVEEMSTKCGHIFCKTCIADAIKRQAKCPTCRKR 198

>gi|225433465|ref|XP_002263351.1| PREDICTED: hypothetical protein [Vitis
        vinifera]

          Length = 220

 Score =  83 bits (204), Expect = 3e-014
 Identities = 35/54 (64%), Positives = 40/54 (74%)
 Frame = -2

Query: 493 PPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           P   P PE P F+CPICM Q TEE STKCGHIFCK CI+ A++   +CPTCRKK
Sbjct: 152 PTEVPSPETPTFTCPICMDQLTEETSTKCGHIFCKECIEGAMAVSQRCPTCRKK 205

>gi|224075260|ref|XP_002304583.1| predicted protein [Populus trichocarpa]

          Length = 242

 Score =  82 bits (200), Expect = 9e-014
 Identities = 38/83 (45%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
 Frame = -2

Query: 580 GGMTRLSPSKRRGVPPNQPVIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGH 401
           G    + P +  G+    P      +S T PPPP    P F CPICM +  E  STKCGH
Sbjct: 148 GSSQTVPPPQLSGLSLTVPPPHFSGLSQTAPPPP---APMFCCPICMDEMKEATSTKCGH 204

Query: 400 IFCKGCIQMAISKQGKCPTCRKK 332
           +FCK CI+ A++ Q KCPTCR K
Sbjct: 205 VFCKSCIEKALAVQKKCPTCRMK 227

>gi|308080596|ref|NP_001183915.1| hypothetical protein LOC100502508 [Zea mays]

          Length = 263

 Score =  80 bits (195), Expect = 3e-013
 Identities = 34/56 (60%), Positives = 39/56 (69%)
 Frame = -2

Query: 499 PTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
           P  P    P+EPK SCPICM + TE  ST CGHIFC+ CI+ AI  Q KCPTCR+K
Sbjct: 194 PPEPVKEVPKEPKLSCPICMNEITEAASTVCGHIFCQPCIKAAIKAQKKCPTCRRK 249

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,349,682,561,373
Number of Sequences: 15229318
Number of Extensions: 5349682561373
Number of Successful Extensions: 1234775341
Number of sequences better than 0.0: 0