BLASTX 7.6.2
Query= UN49450 /QuerySize=729
(728 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type... 126 2e-029
TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type... 126 2e-029
TAIR9_protein||AT5G48655.2 | Symbols: | zinc finger (C3HC4-type... 115 4e-026
TAIR9_protein||AT5G48655.1 | Symbols: | zinc finger (C3HC4-type... 115 4e-026
TAIR9_protein||AT5G48655.3 | Symbols: | zinc finger (C3HC4-type... 115 4e-026
TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1; ... 47 8e-006
>TAIR9_protein||AT3G07200.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 126 bits (315), Expect = 2e-029
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Frame = -2
Query: 697 IDVDAIE--DDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQP 524
I+V AIE DDVVES+AS FA+A +KS ARR VES G R ++RR +
Sbjct: 46 INVVAIEDDDDVVESTASAFAQAKNKSRSARRGSQVVDVESAGANR--STRRRSDQTSVD 103
Query: 523 VIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPT 344
++ + PP EEPKFSCPIC+C FT+EVSTKCGHIFCK CI+ A+S Q KCPT
Sbjct: 104 SVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPT 163
Query: 343 CRKK 332
CRKK
Sbjct: 164 CRKK 167
>TAIR9_protein||AT3G07200.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:2291343-2292223 FORWARD
Length = 183
Score = 126 bits (315), Expect = 2e-029
Identities = 68/124 (54%), Positives = 82/124 (66%), Gaps = 4/124 (3%)
Frame = -2
Query: 697 IDVDAIE--DDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLSPSKRRGVPPNQP 524
I+V AIE DDVVES+AS FA+A +KS ARR VES G R ++RR +
Sbjct: 46 INVVAIEDDDDVVESTASAFAQAKNKSRSARRGSQVVDVESAGANR--STRRRSDQTSVD 103
Query: 523 VIDCEDVSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPT 344
++ + PP EEPKFSCPIC+C FT+EVSTKCGHIFCK CI+ A+S Q KCPT
Sbjct: 104 SVELNKPRKSKAVAPPVEEPKFSCPICLCPFTQEVSTKCGHIFCKKCIKNALSLQAKCPT 163
Query: 343 CRKK 332
CRKK
Sbjct: 164 CRKK 167
>TAIR9_protein||AT5G48655.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 115 bits (286), Expect = 4e-026
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -2
Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
VS + P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188
Score = 83 bits (204), Expect = 1e-016
Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 727 IQASQPVHAMIDVDAIEDDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLS---P 557
I SQP MIDVDAIEDDV+ESSAS FAEA SKS ARRR VESGG TR
Sbjct: 42 ITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRFPANIS 101
Query: 556 SKRRGVPPNQPVIDCEDVS 500
+KRR +P ++ VIDCE S
Sbjct: 102 NKRRRIPSSESVIDCEHAS 120
>TAIR9_protein||AT5G48655.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 115 bits (286), Expect = 4e-026
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -2
Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
VS + P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188
Score = 83 bits (204), Expect = 1e-016
Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 727 IQASQPVHAMIDVDAIEDDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLS---P 557
I SQP MIDVDAIEDDV+ESSAS FAEA SKS ARRR VESGG TR
Sbjct: 42 ITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRFPANIS 101
Query: 556 SKRRGVPPNQPVIDCEDVS 500
+KRR +P ++ VIDCE S
Sbjct: 102 NKRRRIPSSESVIDCEHAS 120
>TAIR9_protein||AT5G48655.3 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:19731575-19732486 REVERSE
Length = 204
Score = 115 bits (286), Expect = 4e-026
Identities = 48/58 (82%), Positives = 53/58 (91%)
Frame = -2
Query: 505 VSPTPPPPPPPEEPKFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTCRKK 332
VS + P PPPEEPKF+CPICMC FTEE+STKCGHIFCKGCI+MAIS+QGKCPTCRKK
Sbjct: 131 VSRSKAPAPPPEEPKFTCPICMCPFTEEMSTKCGHIFCKGCIKMAISRQGKCPTCRKK 188
Score = 83 bits (204), Expect = 1e-016
Identities = 48/79 (60%), Positives = 53/79 (67%), Gaps = 3/79 (3%)
Frame = -2
Query: 727 IQASQPVHAMIDVDAIEDDVVESSASDFAEAISKSSGARRRRSRDGVESGGMTRLS---P 557
I SQP MIDVDAIEDDV+ESSAS FAEA SKS ARRR VESGG TR
Sbjct: 42 ITPSQPAPTMIDVDAIEDDVIESSASAFAEAKSKSRNARRRPLMVDVESGGTTRFPANIS 101
Query: 556 SKRRGVPPNQPVIDCEDVS 500
+KRR +P ++ VIDCE S
Sbjct: 102 NKRRRIPSSESVIDCEHAS 120
>TAIR9_protein||AT4G21070.1 | Symbols: ATBRCA1, BRCA1 | ATBRCA1;
ubiquitin-protein ligase | chr4:11248174-11252633 FORWARD
Length = 942
Score = 47 bits (111), Expect = 8e-006
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 6/77 (7%)
Frame = -2
Query: 463 KFSCPICMCQFTEEVSTKCGHIFCKGCIQMAISKQGKCPTC------RKKSDCERADSSV 302
+ CPIC+ + VS C H+FC CI ++ CP C R+ DS V
Sbjct: 13 ELKCPICLSLYNSAVSLSCNHVFCNACIVKSMKMDATCPVCKIPYHRREIRGAPHMDSLV 72
Query: 301 PSNHQMIDISTLPITLS 251
M D S + + +S
Sbjct: 73 SIYKNMEDASGIKLFVS 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,521,588,256
Number of Sequences: 33410
Number of Extensions: 23521588256
Number of Successful Extensions: 739766944
Number of sequences better than 0.0: 0
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