BLASTX 7.6.2
Query= UN49479 /QuerySize=571
(570 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G79780.1 | Symbols: | FUNCTIONS IN: molecular... 203 8e-053
TAIR9_protein||AT3G16300.1 | Symbols: | integral membrane famil... 133 1e-031
TAIR9_protein||AT3G55390.1 | Symbols: | integral membrane famil... 59 2e-009
>TAIR9_protein||AT1G79780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: membrane;
EXPRESSED IN: leaf whorl, petal, sepal, flower; EXPRESSED DURING: 4
anthesis, petal differentiation and expansion stage; CONTAINS InterPro
DOMAIN/s: Uncharacterised protein family UPF0497, trans-membrane plant
(InterPro:IPR006702), Uncharacterised protein family UPF0497,
trans-membrane plant subgroup (InterPro:IPR006459); BEST Arabidopsis
thaliana protein match is: integral membrane family protein
(TAIR:AT3G16300.1); Has 167 Blast hits to 167 proteins in 9 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 167; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:30015930-30016856 FORWARD
Length = 188
Score = 203 bits (515), Expect = 8e-053
Identities = 100/126 (79%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Frame = -2
Query: 446 WLLQPLLWQYVVGACTVTILYSLVHLCLGIYRLFTGSPITPSRSQAWLCFIFDQVFSYLI 267
W P +QYVVGAC T+LYSL+ LCLG+YRL TGSPITPSR QAWLCF DQ+F YL+
Sbjct: 64 WSFSP-SYQYVVGACAGTVLYSLLQLCLGVYRLVTGSPITPSRFQAWLCFTSDQLFCYLM 122
Query: 266 MSAGSAAIGVTNLNKTGIKHTPLPDFCKTLSSFCNHVALSLLLVLLSFIFLASSSLFNVL 87
MSAGSA GVTNLNKTGI+HTPLPDFCKTLSSFCNHVALSLLLV LSFIFLASSS F VL
Sbjct: 123 MSAGSAGSGVTNLNKTGIRHTPLPDFCKTLSSFCNHVALSLLLVFLSFIFLASSSFFTVL 182
Query: 86 VLSTP* 69
VLSTP*
Sbjct: 183 VLSTP* 188
>TAIR9_protein||AT3G16300.1 | Symbols: | integral membrane family protein |
chr3:5525491-5526207 REVERSE
Length = 213
Score = 133 bits (333), Expect = 1e-031
Identities = 63/125 (50%), Positives = 89/125 (71%), Gaps = 1/125 (0%)
Frame = -2
Query: 452 AAWLLQPLLWQYVVGACTVTILYSLVHLCLGIYRLFTGSPITPSRSQAWLCFIFDQVFSY 273
A W L L Y+V + T+LYSL+ L + RL SP+ P+R+QAW CF+ DQ+ Y
Sbjct: 86 AVWSLSDSL-IYLVVVSSATVLYSLIQLIISGTRLMRKSPVIPTRTQAWFCFVADQIIGY 144
Query: 272 LIMSAGSAAIGVTNLNKTGIKHTPLPDFCKTLSSFCNHVALSLLLVLLSFIFLASSSLFN 93
++S GSAA+GVTN+N+TGI+H PLP+FCK+L FC+H+A S++ L +F+ LA+SSL +
Sbjct: 145 AMVSGGSAALGVTNMNRTGIRHMPLPNFCKSLGFFCDHLAGSIVFALFAFLLLAASSLLD 204
Query: 92 VLVLS 78
VL LS
Sbjct: 205 VLHLS 209
>TAIR9_protein||AT3G55390.1 | Symbols: | integral membrane family protein |
chr3:20534785-20535620 FORWARD
Length = 195
Score = 59 bits (140), Expect = 2e-009
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 7/111 (6%)
Frame = -2
Query: 425 WQYVVGACTVTILYSLVHLCLGIYRLFTGSPITPSRSQAWLCFIFDQVFSYLIMSAGSAA 246
+++V A + LYS+ + ++ + + P Q W F DQVFSYL++SAGSAA
Sbjct: 73 FRFVFVANAIVALYSVFEMGTCVWEFSRETTLWPEAFQVWFDFGHDQVFSYLLLSAGSAA 132
Query: 245 IGVTNLNKTGIKHTPLPDFCKTLSSFCNHVALSLLLVLLSFIFLASSSLFN 93
+ + G D C +FC +++ L +F+FLA SS F+
Sbjct: 133 AALARTMRGG-------DTCTANKAFCLQSDVAIGLGFAAFLFLAFSSCFS 176
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,521,588,256
Number of Sequences: 33410
Number of Extensions: 23521588256
Number of Successful Extensions: 739766944
Number of sequences better than 0.0: 0
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