BLASTX 7.6.2
Query= UN49482 /QuerySize=987
(986 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular... 210 1e-054
TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast... 167 1e-041
TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular... 146 2e-035
TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular... 146 2e-035
>TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces
cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G01883.1); Has 350 Blast
hits to 350 proteins in 105 species: Archae - 0; Bacteria - 211;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes -
110 (source: NCBI BLink). | chr1:514110-515331 REVERSE
Length = 220
Score = 210 bits (533), Expect = 1e-054
Identities = 108/146 (73%), Positives = 115/146 (78%)
Frame = -1
Query: 617 KWMPFISSVEVSFHFMRAY*LSLLLDFF*VTLILCFVV*VLKDKPDLSRWSLKYNAFGQN 438
+W +EV AY L + F + V VLKDKPDLSRWSLKYNAFGQ+
Sbjct: 75 EWQDCSVKMEVDVPVSVAYNFYLDRESFPKWMPFISSVQVLKDKPDLSRWSLKYNAFGQD 134
Query: 437 IKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSCLVELTVSYEVPALLTPVA 258
IKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSC+VELTVSYEVPALLTPVA
Sbjct: 135 IKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPSSCIVELTVSYEVPALLTPVA 194
Query: 257 SALPPFLESLLRGGLERFATLAKTT* 180
S L PF+ESLLRGGLERFA LAKTT*
Sbjct: 195 SVLRPFIESLLRGGLERFAALAKTT* 220
Score = 138 bits (345), Expect = 9e-033
Identities = 77/118 (65%), Positives = 90/118 (76%), Gaps = 9/118 (7%)
Frame = -1
Query: 935 ATHMNTINHLSTTCKTSNLICSNHRLAPQPFHRKPKSFPQLLPLNGSSSSSSSRSPSSSV 756
A +MNTINHLS TCKT N+ +P F RKP S+ L+PL + + S S SSSV
Sbjct: 5 AINMNTINHLSKTCKTPNI------QSPICFDRKPFSY-SLIPLFPKTLNGFS-SYSSSV 56
Query: 755 NRRSRF-NTRNKRFSVSMEWQDCTVKMEVDIPVSVAYNFYLDRESFPKWMPFISSVEV 585
+RRSRF + +RFSVSMEWQDC+VKMEVD+PVSVAYNFYLDRESFPKWMPFISSV+V
Sbjct: 57 SRRSRFIIPKRRRFSVSMEWQDCSVKMEVDVPVSVAYNFYLDRESFPKWMPFISSVQV 114
>TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast; CONTAINS
InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02475.1); Has 320 Blast hits to 320 proteins in 96 species:
Archae - 0; Bacteria - 186; Metazoa - 0; Fungi - 0; Plants - 29;
Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
chr4:813162-814800 FORWARD
Length = 225
Score = 167 bits (421), Expect = 1e-041
Identities = 76/106 (71%), Positives = 91/106 (85%)
Frame = -1
Query: 500 VLKDKPDLSRWSLKYNAFGQNIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGP 321
VLKDKPDLSRW+LKY AFGQN++Y+WLA+NLQP PNQKIHW SLEGLPNKG+VRFFP GP
Sbjct: 116 VLKDKPDLSRWTLKYKAFGQNLEYAWLAKNLQPLPNQKIHWISLEGLPNKGTVRFFPLGP 175
Query: 320 SSCLVELTVSYEVPALLTPVASALPPFLESLLRGGLERFATLAKTT 183
SSC VELT +YEVP LL P A+AL P ++ L++ LE+FA +AK+T
Sbjct: 176 SSCDVELTFAYEVPLLLIPFAAALQPLMQGLIKNSLEQFAEIAKST 221
Score = 75 bits (184), Expect = 4e-014
Identities = 41/83 (49%), Positives = 54/83 (65%), Gaps = 5/83 (6%)
Frame = -1
Query: 833 PKSFPQLLPLNGSSSSSSSRSPSSSVNRRSRFNTRNKRFSVSMEWQDCTVKMEVDIPVSV 654
P S + PL + +S SP S NR + ++ +RF MEWQ+C VKM+V++PVSV
Sbjct: 39 PSSSSPMKPL----TLASRFSPLISTNRSFK-SSVFRRFDTLMEWQECKVKMKVEVPVSV 93
Query: 653 AYNFYLDRESFPKWMPFISSVEV 585
AY Y +RES PKWM FISSV+V
Sbjct: 94 AYGLYSERESIPKWMTFISSVKV 116
>TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 276 Blast hits to 276 proteins
in 86 species: Archae - 0; Bacteria - 162; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 221
Score = 146 bits (368), Expect = 2e-035
Identities = 65/104 (62%), Positives = 84/104 (80%)
Frame = -1
Query: 497 LKDKPDLSRWSLKYNAFGQNIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPS 318
++ PDLSR+ +K +FGQNI+Y +LA+NLQP P++KIHWRS+EG N+GSVRFFP+GPS
Sbjct: 116 MEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFPRGPS 175
Query: 317 SCLVELTVSYEVPALLTPVASALPPFLESLLRGGLERFATLAKT 186
SCLVE++ SYEVP PVA A+ PF+E ++RGGLERFA KT
Sbjct: 176 SCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVKT 219
Score = 83 bits (204), Expect = 2e-016
Identities = 44/85 (51%), Positives = 55/85 (64%), Gaps = 2/85 (2%)
Frame = -1
Query: 842 HRKPKSFPQLLPLNGSSSSSSSRSPSSSVNRRSRFNTRNKRFSVSMEWQDCTVKMEVDIP 663
HR S P++L L SSS++S++ +S N ++ K F M+WQD TVKM VD P
Sbjct: 32 HRSSSSSPRMLLLLSSSSANSAKLLNS--NNGLLISSSPKPFRPVMQWQDVTVKMVVDAP 89
Query: 662 VSVAYNFYLDRESFPKWMPFISSVE 588
SVAY Y DRE FPKWMPF+SSVE
Sbjct: 90 ASVAYKLYADREMFPKWMPFLSSVE 114
>TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 273 Blast hits to 273 proteins
in 85 species: Archae - 0; Bacteria - 160; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 222
Score = 146 bits (368), Expect = 2e-035
Identities = 65/104 (62%), Positives = 84/104 (80%)
Frame = -1
Query: 497 LKDKPDLSRWSLKYNAFGQNIKYSWLARNLQPTPNQKIHWRSLEGLPNKGSVRFFPKGPS 318
++ PDLSR+ +K +FGQNI+Y +LA+NLQP P++KIHWRS+EG N+GSVRFFP+GPS
Sbjct: 117 MEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFPRGPS 176
Query: 317 SCLVELTVSYEVPALLTPVASALPPFLESLLRGGLERFATLAKT 186
SCLVE++ SYEVP PVA A+ PF+E ++RGGLERFA KT
Sbjct: 177 SCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVKT 220
Score = 79 bits (192), Expect = 5e-015
Identities = 44/86 (51%), Positives = 55/86 (63%), Gaps = 3/86 (3%)
Frame = -1
Query: 842 HRKPKSFPQLLPLNGSSSSSSSRSPSSSVNRRSRFNTRNKRFSVSMEWQDCT-VKMEVDI 666
HR S P++L L SSS++S++ +S N ++ K F M+WQD T VKM VD
Sbjct: 32 HRSSSSSPRMLLLLSSSSANSAKLLNS--NNGLLISSSPKPFRPVMQWQDVTRVKMVVDA 89
Query: 665 PVSVAYNFYLDRESFPKWMPFISSVE 588
P SVAY Y DRE FPKWMPF+SSVE
Sbjct: 90 PASVAYKLYADREMFPKWMPFLSSVE 115
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,521,588,256
Number of Sequences: 33410
Number of Extensions: 23521588256
Number of Successful Extensions: 739766944
Number of sequences better than 0.0: 0
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