BLASTX 7.6.2
Query= UN49549 /QuerySize=1175
(1174 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [A... 255 2e-065
gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis ... 246 6e-063
gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-b... 219 8e-055
gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabid... 207 4e-051
gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein... 207 4e-051
gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [A... 195 2e-047
gi|224056565|ref|XP_002298913.1| predicted protein [Populus tric... 183 8e-044
gi|255639113|gb|ACU19856.1| unknown [Glycine max] 183 8e-044
gi|225462109|ref|XP_002277842.1| PREDICTED: hypothetical protein... 182 1e-043
gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrel... 181 2e-043
gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrel... 181 2e-043
gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [... 180 4e-043
gi|224118386|ref|XP_002317806.1| predicted protein [Populus tric... 179 7e-043
gi|224114547|ref|XP_002316790.1| predicted protein [Populus tric... 179 7e-043
gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [... 179 9e-043
gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [... 178 2e-042
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis
thaliana]
Length = 314
Score = 255 bits (649), Expect = 2e-065
Identities = 142/182 (78%), Positives = 149/182 (81%), Gaps = 15/182 (8%)
Frame = +3
Query: 162 TDSKPESES-DLKPKSKPEPGVDQMKKLA-----LNPEAKEFFPSYKKKNNQSLSSEDFA 323
TDSKPE ES DLKPKSKPE DQMKKL LNPEAKEFFPSYK+ NQ S+DF
Sbjct: 28 TDSKPEIESDDLKPKSKPE--YDQMKKLVAMFKKLNPEAKEFFPSYKRNTNQ---SDDFV 82
Query: 324 TAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRITGRASKAQREDSIRRTVYVSDIDQS 503
A K SGE DNKK RR RNNYNQGR+VR+ GRASKAQREDSIRRTVYVSDIDQS
Sbjct: 83 IAIKPSGE----DNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQS 138
Query: 504 VTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRV 683
VTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTMIGYYPVRV
Sbjct: 139 VTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRV 198
Query: 684 LP 689
LP
Sbjct: 199 LP 200
Score = 207 bits (525), Expect = 4e-051
Identities = 101/113 (89%), Positives = 106/113 (93%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAILPVNPT LPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACGEV R+RLLGDQ
Sbjct: 202 KTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQ 261
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPSSN 1029
+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RSPS N
Sbjct: 262 VHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPSPN 314
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 769
Score = 246 bits (627), Expect = 6e-063
Identities = 127/148 (85%), Positives = 132/148 (89%), Gaps = 4/148 (2%)
Frame = +3
Query: 246 LNPEAKEFFPSYKKKNNQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVR 425
LNPEAKEFFPSYKK NQSLSS+DF AKK SGE DNKKDG RR RNNYNQGR+VR
Sbjct: 5 LNPEAKEFFPSYKKNTNQSLSSDDFVIAKKPSGE----DNKKDGINRRRRNNYNQGRRVR 60
Query: 426 ITGRASKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFV 605
+ GRASKAQRE SIRRTVYVSDIDQSVTEEVLAGLFSS GQVVDCRICGDP+SVLRFAFV
Sbjct: 61 LPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRICGDPNSVLRFAFV 120
Query: 606 EFSDDHGARAALSVGGTMIGYYPVRVLP 689
EFSDD GARAALS+GGTMIGYYPVRVLP
Sbjct: 121 EFSDDQGARAALSLGGTMIGYYPVRVLP 148
Score = 181 bits (457), Expect = 3e-043
Identities = 88/107 (82%), Positives = 98/107 (91%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAILPVNPT LPRSEDEREMC+RTIYCTNVDKNATED V+TFF+SACGEV R+RLLGDQ
Sbjct: 150 KTAILPVNPTFLPRSEDEREMCTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQ 209
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIR+S ++ + RFS
Sbjct: 210 VHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRLSQMRSALGRRFS 256
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein
from Arabidopsis thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290 come from this
gene
Length = 829
Score = 219 bits (557), Expect = 8e-055
Identities = 116/145 (80%), Positives = 123/145 (84%), Gaps = 7/145 (4%)
Frame = +3
Query: 255 EAKEFFPSYKKKNNQSLSSEDFATAKKLSGEDLKADNKKDGNFRRSRNNYNQGRKVRITG 434
EAKEFFPSYK+ NQ S+DF A K SGE DNKK RR RNNYNQGR+VR+ G
Sbjct: 8 EAKEFFPSYKRNTNQ---SDDFVIAIKPSGE----DNKKVAINRRRRNNYNQGRRVRLPG 60
Query: 435 RASKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFS 614
RASKAQREDSIRRTVYVSDIDQSVTEE LAGLFSS GQVVDCRICGDP+SVLRFAFVEFS
Sbjct: 61 RASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFS 120
Query: 615 DDHGARAALSVGGTMIGYYPVRVLP 689
DD GAR+ALS+GGTMIGYYPVRVLP
Sbjct: 121 DDQGARSALSLGGTMIGYYPVRVLP 145
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis
thaliana]
Length = 295
Score = 207 bits (525), Expect = 4e-051
Identities = 101/113 (89%), Positives = 106/113 (93%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAILPVNPT LPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACGEV R+RLLGDQ
Sbjct: 183 KTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQ 242
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPSSN 1029
+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RSPS N
Sbjct: 243 VHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPSPN 295
Score = 188 bits (477), Expect = 2e-045
Identities = 108/168 (64%), Positives = 126/168 (75%), Gaps = 9/168 (5%)
Frame = +3
Query: 204 SKPEPGVDQMKKLALNPE---AKEFFPSYKKKNNQSLSSEDFATAKKLS--GEDLKADNK 368
SKPE D +K + PE K+ +KK N + + E F + K+ + +D K
Sbjct: 17 SKPEIESDDLKPKS-KPEYDQMKKLVAMFKKLNPE--AKEFFPSYKRNTNQSDDFVIAIK 73
Query: 369 KDG-NFRRSRNNYNQGRKVRITGRASKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYG 545
G + ++ RNNYNQGR+VR+ GRASKAQREDSIRRTVYVSDIDQSVTEE LAGLFSS G
Sbjct: 74 PSGEDNKKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCG 133
Query: 546 QVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLP 689
QVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTMIGYYPVRVLP
Sbjct: 134 QVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLP 181
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis
thaliana]
Length = 308
Score = 207 bits (525), Expect = 4e-051
Identities = 101/113 (89%), Positives = 106/113 (93%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAILPVNPT LPRSEDEREMCSRTIYCTNVDKNATEDDV TFF+SACGEV R+RLLGDQ
Sbjct: 196 KTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQ 255
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPSSN 1029
+HSTRIAFVEFAMAESAV ALNCSG+VLGSQPIRVSPSKTPVR R +RSPS N
Sbjct: 256 VHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSRITRSPSPN 308
Score = 188 bits (477), Expect = 2e-045
Identities = 108/168 (64%), Positives = 126/168 (75%), Gaps = 9/168 (5%)
Frame = +3
Query: 204 SKPEPGVDQMKKLALNPE---AKEFFPSYKKKNNQSLSSEDFATAKKLS--GEDLKADNK 368
SKPE D +K + PE K+ +KK N + + E F + K+ + +D K
Sbjct: 30 SKPEIESDDLKPKS-KPEYDQMKKLVAMFKKLNPE--AKEFFPSYKRNTNQSDDFVIAIK 86
Query: 369 KDG-NFRRSRNNYNQGRKVRITGRASKAQREDSIRRTVYVSDIDQSVTEEVLAGLFSSYG 545
G + ++ RNNYNQGR+VR+ GRASKAQREDSIRRTVYVSDIDQSVTEE LAGLFSS G
Sbjct: 87 PSGEDNKKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCG 146
Query: 546 QVVDCRICGDPHSVLRFAFVEFSDDHGARAALSVGGTMIGYYPVRVLP 689
QVVDCRICGDP+SVLRFAFVEFSDD GAR+ALS+GGTMIGYYPVRVLP
Sbjct: 147 QVVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLP 194
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis
thaliana]
Length = 327
Score = 195 bits (494), Expect = 2e-047
Identities = 96/126 (76%), Positives = 108/126 (85%), Gaps = 6/126 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAILPVNPT LPRSEDEREMC+RTIYCTN+DK ++ DVR FFESA
Sbjct: 202 TMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESA 261
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEV R+RLLGDQLHSTRIAFVEFA+A+SA+ ALNCSG+V+GSQPIRVSPSKTPVRPR +
Sbjct: 262 CGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMVVGSQPIRVSPSKTPVRPRIT 321
Query: 1012 RSPSSN 1029
R PS+N
Sbjct: 322 RPPSTN 327
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 183 bits (462), Expect = 8e-044
Identities = 89/121 (73%), Positives = 102/121 (84%), Gaps = 6/121 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAILPVNPT LPRSEDEREMC+RT+YCTN+DK ++ +V+ FFES
Sbjct: 183 TMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYCTNIDKKVSQVEVKNFFESI 242
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEV R+RLLGDQ+HSTRIAFVEFAMAESA+ ALNCSG+ LGSQP+RVSPSKTPVRPR +
Sbjct: 243 CGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMALGSQPVRVSPSKTPVRPRVT 302
Query: 1012 R 1014
R
Sbjct: 303 R 303
>gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 183 bits (462), Expect = 8e-044
Identities = 87/111 (78%), Positives = 100/111 (90%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAILPVNPT LPRS+DEREMC+RTIYCTN+DK ++ +V+ FFESACGEV R+RLLGDQ
Sbjct: 185 KTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQ 244
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSPS 1023
+HSTRIAFVEFAMAESA+ ALNCSG++LG+QPIRVSPSKTPVRPR R S
Sbjct: 245 VHSTRIAFVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVPRPAS 295
>gi|225462109|ref|XP_002277842.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 292
Score = 182 bits (460), Expect = 1e-043
Identities = 89/122 (72%), Positives = 103/122 (84%), Gaps = 6/122 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAILPVNPT LPRSEDEREMC+RT+YCTN+DK ++ +V+ FFE A
Sbjct: 168 TMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQAEVKNFFERA 227
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEV+R+RLLGD +HSTRIAFVEFAMAESA+ ALNCSG+VLG+QPIRVSPSKTPVRPR
Sbjct: 228 CGEVSRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGLVLGTQPIRVSPSKTPVRPRVP 287
Query: 1012 RS 1017
R+
Sbjct: 288 RA 289
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 256
Score = 181 bits (459), Expect = 2e-043
Identities = 91/123 (73%), Positives = 100/123 (81%), Gaps = 6/123 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAI+PVNPT LPRSEDEREMC+RTIYCTN+DK ++ DV+ FFES
Sbjct: 132 TMLGYYPVRVLPSKTAIVPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESL 191
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEVAR+RLLGD HSTRIAFVEF MAESA+ ALNCSG +LGS PIRVSPSKTPVRPR
Sbjct: 192 CGEVARLRLLGDYHHSTRIAFVEFVMAESAMAALNCSGAILGSLPIRVSPSKTPVRPRSP 251
Query: 1012 RSP 1020
RSP
Sbjct: 252 RSP 254
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 213
Score = 181 bits (459), Expect = 2e-043
Identities = 91/123 (73%), Positives = 100/123 (81%), Gaps = 6/123 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAI+PVNPT LPRSEDEREMC+RTIYCTN+DK ++ DV+ FFES
Sbjct: 89 TMLGYYPVRVLPSKTAIVPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQADVKLFFESL 148
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEVAR+RLLGD HSTRIAFVEF MAESA+ ALNCSG +LGS PIRVSPSKTPVRPR
Sbjct: 149 CGEVARLRLLGDYHHSTRIAFVEFVMAESAMAALNCSGAILGSLPIRVSPSKTPVRPRSP 208
Query: 1012 RSP 1020
RSP
Sbjct: 209 RSP 211
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis
thaliana]
Length = 358
Score = 180 bits (456), Expect = 4e-043
Identities = 91/123 (73%), Positives = 98/123 (79%), Gaps = 6/123 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAI PVNPT LPR+EDEREMC+RTIYCTN+DK T+ DV+ FFES
Sbjct: 234 TMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESF 293
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEV R+RLLGD HSTRIAFVEF MAESA+ ALNCSGVVLGS PIRVSPSKTPVRPR
Sbjct: 294 CGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSP 353
Query: 1012 RSP 1020
R P
Sbjct: 354 RHP 356
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 179 bits (454), Expect = 7e-043
Identities = 87/110 (79%), Positives = 94/110 (85%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAI PVNPT LPRSEDEREMC+RT+YCTN+DK T+ DVR FFES CGEV R+RLLGD
Sbjct: 182 KTAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDY 241
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1020
HSTRIAFVEFA+AESA+ ALNCSG VLGS PIRVSPSKTPVRPR R P
Sbjct: 242 HHSTRIAFVEFAVAESAIAALNCSGAVLGSLPIRVSPSKTPVRPRLPRPP 291
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 179 bits (454), Expect = 7e-043
Identities = 87/121 (71%), Positives = 102/121 (84%), Gaps = 6/121 (4%)
Frame = +1
Query: 670 TQLGSY------LKTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESA 831
T LG Y KTAILPVNPT LP+SEDEREMC+RT+YCTN++K ++ +V+ FFES
Sbjct: 184 TMLGYYPVRVLPSKTAILPVNPTFLPQSEDEREMCTRTVYCTNIEKKVSQAEVKNFFESI 243
Query: 832 CGEVARIRLLGDQLHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFS 1011
CGEV R+RLLGD +HSTRIAFVEFAMAESA+ ALNCSG+VLGSQP+RVSPSKTPVRPR +
Sbjct: 244 CGEVTRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGMVLGSQPVRVSPSKTPVRPRVT 303
Query: 1012 R 1014
R
Sbjct: 304 R 304
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus
communis]
Length = 385
Score = 179 bits (453), Expect = 9e-043
Identities = 87/110 (79%), Positives = 94/110 (85%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAI PVNPT LPRSEDEREMC+RT+YCTN+DK T+ DVR FFES CGEV R+RLLGD
Sbjct: 274 KTAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDY 333
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1020
HSTRIAFVEF +AESA+ ALNCSG VLGS PIRVSPSKTPVRPR RSP
Sbjct: 334 HHSTRIAFVEFTVAESAILALNCSGAVLGSLPIRVSPSKTPVRPRIPRSP 383
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus
communis]
Length = 379
Score = 178 bits (450), Expect = 2e-042
Identities = 87/110 (79%), Positives = 93/110 (84%)
Frame = +1
Query: 691 KTAILPVNPTSLPRSEDEREMCSRTIYCTNVDKNATEDDVRTFFESACGEVARIRLLGDQ 870
KTAI PVNPT LPRS+DEREMC RTIYCTN+DK T+ DV+ FFES CGEV R+RLLGD
Sbjct: 268 KTAIAPVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDY 327
Query: 871 LHSTRIAFVEFAMAESAVGALNCSGVVLGSQPIRVSPSKTPVRPRFSRSP 1020
HSTRIAFVEF MAESA+ ALNCSGVVLGS PIRVSPSKTPVRPR R P
Sbjct: 328 HHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRIP 377
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,349,682,561,373
Number of Sequences: 15229318
Number of Extensions: 5349682561373
Number of Successful Extensions: 1234775341
Number of sequences better than 0.0: 0
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