BLASTX 7.6.2
Query= UN49550 /QuerySize=732
(731 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G40690.1 | Symbols: | INVOLVED IN: biological... 178 5e-045
TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type... 64 1e-010
TAIR9_protein||AT4G26600.1 | Symbols: | nucleolar protein, puta... 50 1e-006
>TAIR9_protein||AT5G40690.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth
stages; CONTAINS InterPro DOMAIN/s: EF-HAND 1 (InterPro:IPR018247);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G41730.1); Has 208 Blast hits to 177 proteins in 46 species:
Archae - 0; Bacteria - 4; Metazoa - 51; Fungi - 25; Plants - 42;
Viruses - 6; Other Eukaryotes - 80 (source: NCBI BLink). |
chr5:16290770-16291402 FORWARD
Length = 211
Score = 178 bits (449), Expect = 5e-045
Identities = 97/140 (69%), Positives = 106/140 (75%), Gaps = 9/140 (6%)
Frame = -1
Query: 569 TKVSSK-PTNHSKFTGKCGQVASGGHRPGLKLSGFSATGLLDLMSDDYGYDHDCESDEEE 393
TK SSK TN + QVA+GG RPGLKLSGFSATG+LDLMSDDYGYDHD + DEE
Sbjct: 79 TKGSSKVRTNDVTYKMLTWQVAAGGPRPGLKLSGFSATGILDLMSDDYGYDHDYDYDEEN 138
Query: 392 EEEEEEEEYTGCVVEEIVNIQSGGD-GEKEEDGSLDDDVDDDDDDDDGRMSFCDVGVMMM 216
EEEE G VVEE+VNIQS D GE EE+GS D DDDD DDDGRMSFCDVG+MMM
Sbjct: 139 EEEENR----GSVVEEVVNIQSSDDGGETEEEGSND---DDDDTDDDGRMSFCDVGMMMM 191
Query: 215 VDHVEVFDEGWCLVEEMMT* 156
+DHVE +DEGW LVEEMMT*
Sbjct: 192 MDHVEEYDEGWYLVEEMMT* 211
Score = 124 bits (311), Expect = 5e-029
Identities = 57/61 (93%), Positives = 60/61 (98%)
Frame = -1
Query: 695 MKREGKQHGMVRTYRILPPSLNPRPQAKLVNPLTCRPTAGLFTKVSSKPTNHSKFTGKCG 516
MKREGKQHGMVRTYRILPPSLNPRP++KLVNPLT RPTAGLFTKV+SKPTNHSKFTGKCG
Sbjct: 1 MKREGKQHGMVRTYRILPPSLNPRPESKLVNPLTSRPTAGLFTKVTSKPTNHSKFTGKCG 60
Query: 515 Q 513
Q
Sbjct: 61 Q 61
>TAIR9_protein||AT3G10810.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:3381848-3384227 REVERSE
Length = 497
Score = 64 bits (153), Expect = 1e-010
Identities = 40/100 (40%), Positives = 51/100 (51%), Gaps = 18/100 (18%)
Frame = +2
Query: 62 IDNNRSSPNLLKQFT------KAKG---NTMIWGNKSKRSVKSSFLQPNTILHQILPHDQ 214
+ + SSP LKQ T ++K N I+G K K+ SSFL ++ P
Sbjct: 267 VGTSNSSPR-LKQLTDTITGSRSKNLGLNNTIFG-KVKQVRLSSFLPNSSDSSTKSPSPS 324
Query: 215 PSSSPPHHKNSSFHHHHHHHHQHHHQETHLLPFHHHHHSV 334
PS PH K+ HHHHHHHH HHH H HHHHH++
Sbjct: 325 PS---PHSKHHHHHHHHHHHHHHHHHNHH----HHHHHNL 357
>TAIR9_protein||AT4G26600.1 | Symbols: | nucleolar protein, putative |
chr4:13419629-13423418 FORWARD
Length = 672
Score = 50 bits (118), Expect = 1e-006
Identities = 27/54 (50%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Frame = -1
Query: 416 DCESDEEEEEEEEEEEYTGCVVEEIVNIQSGGDGEKEEDGSLDDDVDDDDDDDD 255
+ +DEEEEEEE E+ G E ++ S GD E D DDD DDDDDDDD
Sbjct: 56 EVSTDEEEEEEENEQSDEGS--ESGSDLFSDGDEEGNNDSDDDDDDDDDDDDDD 107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,611,863,236
Number of Sequences: 33410
Number of Extensions: 23611863236
Number of Successful Extensions: 745320554
Number of sequences better than 0.0: 0
|