BLASTX 7.6.2
Query= UN49633 /QuerySize=846
(845 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 388 3e-108
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 388 3e-108
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 121 7e-028
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 121 7e-028
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 84 1e-016
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 79 3e-015
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 76 2e-014
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 388 bits (995), Expect = 3e-108
Identities = 189/216 (87%), Positives = 202/216 (93%), Gaps = 1/216 (0%)
Frame = +3
Query: 63 MSALVALCRARASSSSSSVFNSLVRPTFRSFSTGFGDVQNKTLVAEMEEKMLHMDINSMI 242
MS LVALCRARA S+SSS+FNS++RP FR+FSTGF D QNK+LVA+M+E+MLHMDINSMI
Sbjct: 1 MSGLVALCRARA-SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMI 59
Query: 243 GSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGRCLIKLPSGDTRWIN 422
GSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA G+CLIKLPSGDT+WIN
Sbjct: 60 GSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWIN 119
Query: 423 ARCRATIGTVSNPSHGVKKLYKAGQSRWLGIIPKVRGVAMNPCDRPHGGGEGKSKSSGSR 602
A+CRATIGTVSNPSHG KKLYKAGQSRWLGI PKVRGVAMNPCD PHGGGEGKSKSSGSR
Sbjct: 120 AKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSR 179
Query: 603 GRTSVSPWGKPCKGGYKFASVKKKKKRLAAREAKM* 710
GRTSVSPWGKPCKGGYK ASVKKKKKRLA AKM*
Sbjct: 180 GRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM* 215
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 388 bits (995), Expect = 3e-108
Identities = 189/216 (87%), Positives = 202/216 (93%), Gaps = 1/216 (0%)
Frame = +3
Query: 63 MSALVALCRARASSSSSSVFNSLVRPTFRSFSTGFGDVQNKTLVAEMEEKMLHMDINSMI 242
MS LVALCRARA S+SSS+FNS++RP FR+FSTGF D QNK+LVA+M+E+MLHMDINSMI
Sbjct: 1 MSGLVALCRARA-SASSSLFNSVIRPAFRNFSTGFADTQNKSLVAQMKEEMLHMDINSMI 59
Query: 243 GSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGRCLIKLPSGDTRWIN 422
GSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGTNAKILKEPA G+CLIKLPSGDT+WIN
Sbjct: 60 GSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILKEPAKGKCLIKLPSGDTKWIN 119
Query: 423 ARCRATIGTVSNPSHGVKKLYKAGQSRWLGIIPKVRGVAMNPCDRPHGGGEGKSKSSGSR 602
A+CRATIGTVSNPSHG KKLYKAGQSRWLGI PKVRGVAMNPCD PHGGGEGKSKSSGSR
Sbjct: 120 AKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPKVRGVAMNPCDHPHGGGEGKSKSSGSR 179
Query: 603 GRTSVSPWGKPCKGGYKFASVKKKKKRLAAREAKM* 710
GRTSVSPWGKPCKGGYK ASVKKKKKRLA AKM*
Sbjct: 180 GRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM* 215
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 121 bits (302), Expect = 7e-028
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Frame = +3
Query: 240 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGRCLIKLPSGDTRWI 419
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 420 NARCRATIGTVSNPSHGVKKLYKAGQSRWLGIIPKVRGVAMNPCDRPHGGGEGKSKSSGS 599
+ C AT+G V N K L +AG WLG P VRGV MNP D PHGGGEG++
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK 242
Query: 600 RGRTSVSPWGKPCKGGYKFASVKKKKK 680
+ V+PWG P G +K+KK
Sbjct: 243 K---PVTPWGYPALG----RRTRKRKK 262
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 121 bits (302), Expect = 7e-028
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 8/147 (5%)
Frame = +3
Query: 240 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGRCLIKLPSGDTRWI 419
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 420 NARCRATIGTVSNPSHGVKKLYKAGQSRWLGIIPKVRGVAMNPCDRPHGGGEGKSKSSGS 599
+ C AT+G V N K L +AG WLG P VRGV MNP D PHGGGEG++
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGRAPIGRK 242
Query: 600 RGRTSVSPWGKPCKGGYKFASVKKKKK 680
+ V+PWG P G +K+KK
Sbjct: 243 K---PVTPWGYPALG----RRTRKRKK 262
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 84 bits (206), Expect = 1e-016
Identities = 52/140 (37%), Positives = 71/140 (50%), Gaps = 6/140 (4%)
Frame = +3
Query: 231 NSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGRCLIKLPSGD 407
N M+G+ +PLG + G +I N+E++ G L RA+G A ++ P S +KLPSG
Sbjct: 96 NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155
Query: 408 TRWINARCRATIGTVSNPSHGVKKLYKAGQS-----RWLGIIPKVRGVAMNPCDRPHGGG 572
+ + + CRA IG V+ K L KAG + P VRGVAMNP + PHGGG
Sbjct: 156 KKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGG 215
Query: 573 EGKSKSSGSRGRTSVSPWGK 632
+ S R S K
Sbjct: 216 NHQHIGHASTVRRDKSAGAK 235
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 79 bits (193), Expect = 3e-015
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 14/142 (9%)
Frame = +3
Query: 237 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGRCLIKLPSGDTR 413
++G+ +PL + G ++ N+E + G L RA+G A ++ P S IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKK 156
Query: 414 WINARCRATIGTVSNPSHGVKKLYKAG---------QSRWLGIIPKVRGVAMNPCDRPHG 566
+ + CRA IG V+ K + KAG ++ W PKVRGVAMNP + PHG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSW----PKVRGVAMNPVEHPHG 212
Query: 567 GGEGKSKSSGSRGRTSVSPWGK 632
GG + S R P K
Sbjct: 213 GGNHQHIGHASTVRRDAPPGQK 234
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 76 bits (186), Expect = 2e-014
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Frame = +3
Query: 237 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGRCLIKLPSGDTR 413
++G+ +PL + G +I N+E + G RA+G A ++ P + IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKK 156
Query: 414 WINARCRATIGTVSNPSHGVKKLYKAGQSRWLGII-----PKVRGVAMNPCDRPHGGGEG 578
+ + CRA IG V+ K + KAG + + PKVRGVAMNP + PHGGG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 216
Query: 579 KSKSSGSRGRTSVSPWGK 632
+ S R P K
Sbjct: 217 QHIGHASTVRRDAPPGKK 234
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,611,863,236
Number of Sequences: 33410
Number of Extensions: 23611863236
Number of Successful Extensions: 745320554
Number of sequences better than 0.0: 0
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