Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN49635


BLASTX 7.6.2

Query= UN49635 /QuerySize=817
        (816 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT3G27160.1 | Symbols: GHS1 | GHS1 (GLUCOSE HYPER...    244   7e-065
TAIR9_protein||AT5G63300.1 | Symbols:  | structural constituent ...    102   4e-022
TAIR9_protein||AT5G63300.2 | Symbols:  | structural constituent ...     85   4e-017

>TAIR9_protein||AT3G27160.1 | Symbols: GHS1 | GHS1 (GLUCOSE HYPERSENSITIVE 1);
        structural constituent of ribosome | chr3:10017531-10018854 FORWARD

          Length = 184

 Score =  244 bits (621), Expect = 7e-065
 Identities = 138/186 (74%), Positives = 149/186 (80%), Gaps = 8/186 (4%)
 Frame = +1

Query: 118 LRSHLRASSPSSHHSNPTPNQPRLQMSHSPLQHSPTDGNDLAVESMAMDAEEPSSNASLS 297
           L S +   SP    + PTP  P L +    +  S    NDLA+ESMA++ E  S+ +SLS
Sbjct:   7 LTSFISFISPFKSQTKPTP-PPNLTLPSPTI--SQRRRNDLAIESMAVE-ETSSTASSLS 62

Query: 298 SELASVICPSLAYPNTLLFSSSGYNVQVFVEDNESEERLVNRFRREVMSTGVIQECKRRR 477
           SELASVICPSLAY NTL F SSGYNVQVFVEDNESEERLVNRFRREVM TGVIQECKRRR
Sbjct:  63 SELASVICPSLAYSNTLFF-SSGYNVQVFVEDNESEERLVNRFRREVMRTGVIQECKRRR 121

Query: 478 YFENKQDEKKRRTRDAAKRNKKRRPFAKFTQETREEAAAAATKSKKKDEQEDNWDWEMPG 657
           YFENKQDEKKRRTRDAAKRNKKRRP A+FTQETREE AAAATKSKKKDE+EDN  WEMPG
Sbjct: 122 YFENKQDEKKRRTRDAAKRNKKRRPQARFTQETREE-AAAATKSKKKDEEEDN--WEMPG 178

Query: 658 GDVPS* 675
           GDVPS*
Sbjct: 179 GDVPS* 184


 Score =  76 bits (185), Expect = 3e-014
 Identities = 35/40 (87%), Positives = 38/40 (95%)
 Frame = +3

Query: 111 MAASFSLTSFISFISPFKSHTKPTPPPNVTLPTPTLSHRR 230
           MAASFSLTSFISFISPFKS TKPTPPPN+TLP+PT+S RR
Sbjct:   1 MAASFSLTSFISFISPFKSQTKPTPPPNLTLPSPTISQRR 40

>TAIR9_protein||AT5G63300.1 | Symbols:  | structural constituent of ribosome |
        chr5:25371122-25371759 FORWARD

          Length = 186

 Score =  102 bits (252), Expect = 4e-022
 Identities = 62/173 (35%), Positives = 94/173 (54%), Gaps = 9/173 (5%)
 Frame = +1

Query: 148 SSHHSNPTPNQPRLQMSHSPLQHSPTDGNDLAVESMAMDAEEPSSNASLSSELASVICPS 327
           SS  S+  P+   L+    P   S      L++ +  + AE           +  V  PS
Sbjct:  14 SSLLSSKPPSPSSLKPITLPSSVSARTSQHLSMTTKILTAEH-------DDVINRVAYPS 66

Query: 328 LAYPNTLLFSSSGYNVQVFVEDNESEERLVNRFRREVMSTGVIQECKRRRYFENKQDEKK 507
           LA  N + F SS YNV+V  +D ESEE+LVN F+R     GV+QE +RRR+FE+  ++K 
Sbjct:  67 LANANLVFFKSSYYNVEVVPKDGESEEQLVNDFKRSCFRAGVLQESRRRRFFESSLEKKT 126

Query: 508 RRTRDAAKRNKKRRPFAKFTQETREEAAAAATKSKKKDEQEDNWDWEMPGGDV 666
           R+T++AAK+ +KRRP  K    +  E       + ++DEQ+D+  WE+P  D+
Sbjct: 127 RKTKEAAKKYRKRRPNPKPKPLSTSEIRKHNRNASREDEQDDH--WELPPEDI 177

>TAIR9_protein||AT5G63300.2 | Symbols:  | structural constituent of ribosome |
        chr5:25371122-25371775 FORWARD

          Length = 218

 Score =  85 bits (209), Expect = 4e-017
 Identities = 51/136 (37%), Positives = 75/136 (55%), Gaps = 7/136 (5%)
 Frame = +1

Query: 148 SSHHSNPTPNQPRLQMSHSPLQHSPTDGNDLAVESMAMDAEEPSSNASLSSELASVICPS 327
           SS  S+  P+   L+    P   S      L++ +  + AE           +  V  PS
Sbjct:  14 SSLLSSKPPSPSSLKPITLPSSVSARTSQHLSMTTKILTAEH-------DDVINRVAYPS 66

Query: 328 LAYPNTLLFSSSGYNVQVFVEDNESEERLVNRFRREVMSTGVIQECKRRRYFENKQDEKK 507
           LA  N + F SS YNV+V  +D ESEE+LVN F+R     GV+QE +RRR+FE+  ++K 
Sbjct:  67 LANANLVFFKSSYYNVEVVPKDGESEEQLVNDFKRSCFRAGVLQESRRRRFFESSLEKKT 126

Query: 508 RRTRDAAKRNKKRRPF 555
           R+T++AAK+ +KR  F
Sbjct: 127 RKTKEAAKKYRKRSDF 142

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,611,863,236
Number of Sequences: 33410
Number of Extensions: 23611863236
Number of Successful Extensions: 745320554
Number of sequences better than 0.0: 0