BLASTX 7.6.2
Query= UN49823 /QuerySize=1124
(1123 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo ... 518 3e-147
TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)... 177 1e-044
TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)... 177 1e-044
TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)... 177 1e-044
TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular... 133 3e-031
TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular... 129 5e-030
TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)... 49 7e-006
>TAIR9_protein||AT4G21190.1 | Symbols: emb1417 | emb1417 (embryo defective 1417)
| chr4:11292493-11293763 REVERSE
Length = 308
Score = 518 bits (1333), Expect = 3e-147
Identities = 268/311 (86%), Positives = 284/311 (91%), Gaps = 11/311 (3%)
Frame = +1
Query: 115 MLSLRYSLPY-LPQTKE-STKLFSKRPSTVVVCAARGPRPRSPRVWKTRKRIGSISKSAK 288
MLSLRYSLPY L QT+E STKLF+K+P+ VVVCAARGPRPRSPRVWKTRKRIG+ISK+AK
Sbjct: 1 MLSLRYSLPYLLLQTRESSTKLFTKKPNNVVVCAARGPRPRSPRVWKTRKRIGTISKAAK 60
Query: 289 MIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSK 468
MIACIK LSNVKEEVYGALDSFIAWELEFPLVIVKKAL ILEDE+EWKKIIQVTKWMLSK
Sbjct: 61 MIACIKGLSNVKEEVYGALDSFIAWELEFPLVIVKKALVILEDEKEWKKIIQVTKWMLSK 120
Query: 469 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHHK 648
GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMH K
Sbjct: 121 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHQK 180
Query: 649 LFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWEFRYIKGRRVKV 828
LFEVFADMEELGVKPN+AIV MVGKVF+KL M DKYEKLMKKYPPPQWEFRYIKGRRVKV
Sbjct: 181 LFEVFADMEELGVKPNVAIVSMVGKVFVKLEMKDKYEKLMKKYPPPQWEFRYIKGRRVKV 240
Query: 829 KAKQLNELSEGEGGLSSDEDKIESKSDMLSVEEANEDGDDFSEEEE---EGLGVNQRQIG 999
KAKQLNELSEGEGGLSSDEDKI+++ +E EDG+D SEEEE E LG +Q QI
Sbjct: 241 KAKQLNELSEGEGGLSSDEDKIDNE-----IESEEEDGEDLSEEEEDEKELLGGSQGQI- 294
Query: 1000 TSREPCLDHLN 1032
TSREP LDHL+
Sbjct: 295 TSREPSLDHLD 305
>TAIR9_protein||AT4G18975.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 177 bits (448), Expect = 1e-044
Identities = 91/225 (40%), Positives = 131/225 (58%), Gaps = 1/225 (0%)
Frame = +1
Query: 157 KESTKLFSKRPSTVVVCAARGPRPRSPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVY 336
KE+ KL +TV + + +WK GS K+ ++ + L N KE VY
Sbjct: 57 KEAGKLDRGYVATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVY 116
Query: 337 GALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNAL 516
GAL+ ++AWE+EFP++ KAL IL +W ++IQ+ KWMLSKGQG TMGTY LL A
Sbjct: 117 GALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAF 176
Query: 517 AEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPN 696
D R DEAE LWN + H PR+ F +MI++Y D+H K+ EVFADMEEL V P+
Sbjct: 177 DMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPD 236
Query: 697 IAIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWEFRYIKGRRVKVK 831
V + F +L + + ++++Y ++++ Y G RV+VK
Sbjct: 237 EDSARRVARAFRELNQEENRKLILRRY-LSEYKYIYFNGERVRVK 280
>TAIR9_protein||AT4G18975.2 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393503 REVERSE
Length = 261
Score = 177 bits (448), Expect = 1e-044
Identities = 91/225 (40%), Positives = 131/225 (58%), Gaps = 1/225 (0%)
Frame = +1
Query: 157 KESTKLFSKRPSTVVVCAARGPRPRSPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVY 336
KE+ KL +TV + + +WK GS K+ ++ + L N KE VY
Sbjct: 30 KEAGKLDRGYVATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVY 89
Query: 337 GALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNAL 516
GAL+ ++AWE+EFP++ KAL IL +W ++IQ+ KWMLSKGQG TMGTY LL A
Sbjct: 90 GALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAF 149
Query: 517 AEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPN 696
D R DEAE LWN + H PR+ F +MI++Y D+H K+ EVFADMEEL V P+
Sbjct: 150 DMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPD 209
Query: 697 IAIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWEFRYIKGRRVKVK 831
V + F +L + + ++++Y ++++ Y G RV+VK
Sbjct: 210 EDSARRVARAFRELNQEENRKLILRRY-LSEYKYIYFNGERVRVK 253
>TAIR9_protein||AT4G18975.3 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr4:10392170-10393665 REVERSE
Length = 288
Score = 177 bits (448), Expect = 1e-044
Identities = 91/225 (40%), Positives = 131/225 (58%), Gaps = 1/225 (0%)
Frame = +1
Query: 157 KESTKLFSKRPSTVVVCAARGPRPRSPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVY 336
KE+ KL +TV + + +WK GS K+ ++ + L N KE VY
Sbjct: 57 KEAGKLDRGYVATVNSKEIKKVGKKEHHLWKKNDSAGSGQKALNLVRMLSGLPNEKEAVY 116
Query: 337 GALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNAL 516
GAL+ ++AWE+EFP++ KAL IL +W ++IQ+ KWMLSKGQG TMGTY LL A
Sbjct: 117 GALNKWVAWEVEFPIIAAAKALQILRKRSQWHRVIQLAKWMLSKGQGATMGTYDILLLAF 176
Query: 517 AEDNRLDEAEELWNKLFMEHLEGTPRKFFNKMISIYYKRDMHHKLFEVFADMEELGVKPN 696
D R DEAE LWN + H PR+ F +MI++Y D+H K+ EVFADMEEL V P+
Sbjct: 177 DMDERADEAESLWNMILHTHTRSIPRRLFARMIALYAHHDLHDKVIEVFADMEELKVSPD 236
Query: 697 IAIVDMVGKVFLKLGMNDKYEKLMKKYPPPQWEFRYIKGRRVKVK 831
V + F +L + + ++++Y ++++ Y G RV+VK
Sbjct: 237 EDSARRVARAFRELNQEENRKLILRRY-LSEYKYIYFNGERVRVK 280
>TAIR9_protein||AT1G04590.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: emb1417 (embryo
defective 1417) (TAIR:AT4G21190.1); Has 54 Blast hits to 54 proteins in
8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
chr1:1258760-1261411 REVERSE
Length = 382
Score = 133 bits (333), Expect = 3e-031
Identities = 69/183 (37%), Positives = 108/183 (59%), Gaps = 1/183 (0%)
Frame = +1
Query: 232 SPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAIL 411
+PR + + I K ++ + ++ + KE VYGALD+++AWE FP+ +K +A L
Sbjct: 130 NPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASL 189
Query: 412 EDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTP 591
E E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L P
Sbjct: 190 EKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVP 249
Query: 592 RKFFNKMISIYYKRDMHHKLFEVFADMEELGVK-PNIAIVDMVGKVFLKLGMNDKYEKLM 768
+ +M+ IY++ +M +L ++F D+E K P+ IV V + LGM D+ E+++
Sbjct: 250 WQLCLQMMRIYFRNNMLQELVKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKERVV 309
Query: 769 KKY 777
KY
Sbjct: 310 TKY 312
>TAIR9_protein||AT1G04590.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth
stages; BEST Arabidopsis thaliana protein match is: pentatricopeptide
(PPR) repeat-containing protein (TAIR:AT4G18975.3); Has 54 Blast hits
to 54 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0;
Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 2 (source: NCBI
BLink). | chr1:1258760-1261411 REVERSE
Length = 385
Score = 129 bits (322), Expect = 5e-030
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 4/186 (2%)
Frame = +1
Query: 232 SPRVWKTRKRIGSISKSAKMIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAIL 411
+PR + + I K ++ + ++ + KE VYGALD+++AWE FP+ +K +A L
Sbjct: 130 NPRKHQIGENIPKKDKIKFLVNTLLDIEDNKEAVYGALDAWVAWERNFPIASLKIVIASL 189
Query: 412 EDEREWKKIIQVTKWMLSKGQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTP 591
E E +W +++QV KW+LSKGQG TMGTY L+ AL D R +EA +W K L P
Sbjct: 190 EKEHQWHRMVQVIKWILSKGQGNTMGTYGQLIRALDMDRRAEEAHVIWRKKVGNDLHSVP 249
Query: 592 RKFFNKMISIYYKRDMHHKLFEV---FADMEELGVK-PNIAIVDMVGKVFLKLGMNDKYE 759
+ +M+ IY++ +M +L +V F D+E K P+ IV V + LGM D+ E
Sbjct: 250 WQLCLQMMRIYFRNNMLQELVKVMKLFKDLESYDRKPPDKHIVQTVADAYELLGMLDEKE 309
Query: 760 KLMKKY 777
+++ KY
Sbjct: 310 RVVTKY 315
>TAIR9_protein||AT5G02860.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:654102-656561 FORWARD
Length = 820
Score = 49 bits (114), Expect = 7e-006
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 7/162 (4%)
Frame = +1
Query: 289 MIACIKELSNVKEEVYGALDSFIAWELEFPLVIVKKALAILEDEREWKKIIQVTKWMLSK 468
+I C K ++ +E + A + V L + K+ ++V M+
Sbjct: 285 LITCCKR-GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLN 343
Query: 469 GQGRTMGTYFSLLNALAEDNRLDEAEELWNKLFMEHLEGTPRKF-FNKMISIYYKRDMHH 645
G ++ TY SL++A A D LDEA EL N+ M P F + ++S + +
Sbjct: 344 GFSPSIVTYNSLISAYARDGMLDEAMELKNQ--MAEKGTKPDVFTYTTLLSGFERAGKVE 401
Query: 646 KLFEVFADMEELGVKPNIAIVDMVGKVFLKLGMNDKYEKLMK 771
+F +M G KPNI + K++ G K+ ++MK
Sbjct: 402 SAMSIFEEMRNAGCKPNICTFNAFIKMY---GNRGKFTEMMK 440
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,698,091,651
Number of Sequences: 33410
Number of Extensions: 23698091651
Number of Successful Extensions: 745489739
Number of sequences better than 0.0: 0
|
