BLASTX 7.6.2
Query= UN49829 /QuerySize=863
(862 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S... 318 3e-087
TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S... 49 4e-006
TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S... 49 4e-006
TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S... 49 4e-006
TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S... 49 4e-006
TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S... 49 4e-006
TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S... 49 4e-006
>TAIR9_protein||AT3G13120.1 | Symbols: | 30S ribosomal protein S10,
chloroplast, putative | chr3:4220310-4221526 REVERSE
Length = 192
Score = 318 bits (814), Expect = 3e-087
Identities = 169/199 (84%), Positives = 177/199 (88%), Gaps = 9/199 (4%)
Frame = -3
Query: 779 MAVSSVTSFILPPFANLTSSSSSSSTKQKVSLLPSSSTHGGIGSCVLNKPSISFTKKVFA 600
MAVS+V+SF+LP F SSS SST+ KVSLLPSSSTHGG+ SCVL KPS+S T KVFA
Sbjct: 1 MAVSTVSSFLLPSFG--IPSSSPSSTRLKVSLLPSSSTHGGLSSCVLTKPSVSLT-KVFA 57
Query: 599 APETL--TPETLEEPASDVFSEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQ 426
P+TL TPE L+EPA SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQ
Sbjct: 58 VPDTLDPTPEILDEPA----SEVPSSSSISVDADKMAPKQKIRIKLRSYWVPLIEDSCKQ 113
Query: 425 ILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARLHFEIRTHQRMIDILYPTAQTI 246
ILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDAR HFEIRTHQRMIDILYPTAQTI
Sbjct: 114 ILDAARNTNAKTMGPVPLPTKKRIYCVLKSPHVHKDARFHFEIRTHQRMIDILYPTAQTI 173
Query: 245 DSLMQLDLPAGVDVEVKL* 189
DSLMQLDLPAGVDVEVKL*
Sbjct: 174 DSLMQLDLPAGVDVEVKL* 192
>TAIR9_protein||AT3G47370.2 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G45030.1 | Symbols: | 40S ribosomal protein S20 (RPS20A) |
chr3:16471606-16472312 REVERSE
Length = 125
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT3G47370.1 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT3G47370.3 | Symbols: | 40S ribosomal protein S20 (RPS20B) |
chr3:17453671-17454437 REVERSE
Length = 123
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 22 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 81
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 82 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 119
>TAIR9_protein||AT5G62300.1 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
>TAIR9_protein||AT5G62300.2 | Symbols: | 40S ribosomal protein S20 (RPS20C) |
chr5:25021388-25022235 REVERSE
Length = 125
Score = 49 bits (115), Expect = 4e-006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Frame = -3
Query: 485 KIRIKLRSYWVPLIEDSCKQILDAARNTNAKTMGPVPLPTKKRIYCVLKSP-HVHKDARL 309
KIRI L S V +E C ++ A++ + GPV +PTK K+P +
Sbjct: 24 KIRITLSSKNVKNLEKVCTDLVRGAKDKRLRVKGPVRMPTKVLKITTRKAPCGEGTNTWD 83
Query: 308 HFEIRTHQRMIDILYPTAQTIDSLMQLDLPAGVDVEVKL 192
FE+R H+R+ID L+ + + + + + GV+VEV +
Sbjct: 84 RFELRVHKRVID-LFSSPDVVKQITSITIEPGVEVEVTI 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,698,091,651
Number of Sequences: 33410
Number of Extensions: 23698091651
Number of Successful Extensions: 745489739
Number of sequences better than 0.0: 0
|
