BLASTX 7.6.2
Query= UN49922 /QuerySize=878
(877 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 389 2e-108
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 385 3e-107
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 345 3e-095
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 96 3e-020
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 96 3e-020
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 80 1e-015
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 80 1e-015
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 389 bits (998), Expect = 2e-108
Identities = 188/210 (89%), Positives = 196/210 (93%), Gaps = 1/210 (0%)
Frame = -1
Query: 787 HTHHRKGP-AKFRSHDPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE 611
H R P A+ PFR+KKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE
Sbjct: 50 HDPGRGAPLARVAFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE 109
Query: 610 GAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQV 431
GAV+CNVEHHVGDRGV ARASGDYAIVI+HNPDNDT+R+KLPSGSKKIVPSGCRAMIGQV
Sbjct: 110 GAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQV 169
Query: 430 AGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA 251
AGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA
Sbjct: 170 AGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA 229
Query: 250 PPGQKVGLIAARRTGRLRGQAAALASKQE* 161
PPG+KVGLIAARRTGRLRGQAAALASK +*
Sbjct: 230 PPGKKVGLIAARRTGRLRGQAAALASKAD* 259
Score = 69 bits (166), Expect = 5e-012
Identities = 32/33 (96%)
Frame = -1
Query: 841 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSHD 743
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRS D
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLD 33
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 385 bits (987), Expect = 3e-107
Identities = 188/210 (89%), Positives = 195/210 (92%), Gaps = 1/210 (0%)
Frame = -1
Query: 787 HTHHRKGP-AKFRSHDPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE 611
H R P A+ PFR+KKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE
Sbjct: 50 HDPGRGAPLARVTFRHPFRFKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE 109
Query: 610 GAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQV 431
GAVVCNVEHHVGDRGVLARASGDYAIVI+HNPD+DTTR+KLPSGSKKIVPSGCRAMIGQV
Sbjct: 110 GAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKKIVPSGCRAMIGQV 169
Query: 430 AGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA 251
AGGGRTEKPMLKAGNAYHKYRVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA
Sbjct: 170 AGGGRTEKPMLKAGNAYHKYRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA 229
Query: 250 PPGQKVGLIAARRTGRLRGQAAALASKQE* 161
PPGQKVGLIAARRTGRLRGQAAA A+K +*
Sbjct: 230 PPGQKVGLIAARRTGRLRGQAAASAAKAD* 259
Score = 69 bits (166), Expect = 5e-012
Identities = 32/33 (96%)
Frame = -1
Query: 841 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSHD 743
MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRS D
Sbjct: 1 MGRVIRAQRKGAGSVFKSHTHHRKGPAKFRSLD 33
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 345 bits (883), Expect = 3e-095
Identities = 168/209 (80%), Positives = 181/209 (86%), Gaps = 1/209 (0%)
Frame = -1
Query: 787 HTHHRKGP-AKFRSHDPFRYKKQKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPE 611
H R P A+ PFRY KQKELFVAAEGMYTGQ+LYCGKKA L+VGNVLPL SIPE
Sbjct: 51 HDPGRGAPLARVAFRHPFRYMKQKELFVAAEGMYTGQYLYCGKKANLMVGNVLPLGSIPE 110
Query: 610 GAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQV 431
GAV+CNVE HVGDRG LARASGDYAIVI+HNP+++TTRVKLPSGSKKI+PS CRAMIGQV
Sbjct: 111 GAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGSKKILPSACRAMIGQV 170
Query: 430 AGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDA 251
AGGGRTEKP+LKAGNAYHKY+ KRNCWP VRGVAMNPVEHPHGGGNHQHIGHASTVRRD
Sbjct: 171 AGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGGNHQHIGHASTVRRDK 230
Query: 250 PPGQKVGLIAARRTGRLRGQAAALASKQE 164
G KVG IAARRTGR RG AA LA+K +
Sbjct: 231 SAGAKVGQIAARRTGRRRGAAATLAAKAD 259
Score = 64 bits (154), Expect = 1e-010
Identities = 32/34 (94%), Gaps = 1/34 (2%)
Frame = -1
Query: 841 MGRVIRAQRKG-AGSVFKSHTHHRKGPAKFRSHD 743
MGRVIRAQRKG AGSVFKSHTHHRKGPAKFRS D
Sbjct: 1 MGRVIRAQRKGAAGSVFKSHTHHRKGPAKFRSLD 34
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 96 bits (236), Expect = 3e-020
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Frame = -1
Query: 724 QKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASG 545
+K + G G + G + + +GN LPL +P G + N+E +G G LARA+G
Sbjct: 98 EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAG 157
Query: 544 DYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRV 365
A +I+ + + +KLPSG +++ C A +GQV G +K + +AG+
Sbjct: 158 AVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS------- 208
Query: 364 KRNCW----PKVRGVAMNPVEHPHGGG 296
CW P VRGV MNPV+HPHGGG
Sbjct: 209 --KCWLGKRPVVRGVVMNPVDHPHGGG 233
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 96 bits (236), Expect = 3e-020
Identities = 53/147 (36%), Positives = 78/147 (53%), Gaps = 15/147 (10%)
Frame = -1
Query: 724 QKELFVAAEGMYTGQFLYCGKKATLVVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASG 545
+K + G G + G + + +GN LPL +P G + N+E +G G LARA+G
Sbjct: 98 EKRYILHPRGAIIGDTIVSGTEVPIKMGNALPLTDMPLGTAIHNIEITLGRGGQLARAAG 157
Query: 544 DYAIVISHNPDNDTTRVKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRV 365
A +I+ + + +KLPSG +++ C A +GQV G +K + +AG+
Sbjct: 158 AVAKLIA--KEGKSATLKLPSGEVRLISKNCSATVGQVGNVGVNQKSLGRAGS------- 208
Query: 364 KRNCW----PKVRGVAMNPVEHPHGGG 296
CW P VRGV MNPV+HPHGGG
Sbjct: 209 --KCWLGKRPVVRGVVMNPVDHPHGGG 233
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 80 bits (197), Expect = 1e-015
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Frame = -1
Query: 649 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKK 470
++G+ +PL + G ++ N+E + G + RA+G A ++ P +KLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILK-EPAKGKCLIKLPSGDTK 116
Query: 469 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 290
+ + CRA IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQSRW-----LGIRPKVRGVAMNPCDHPHGGGEG 171
Query: 289 QHIGHASTVRRDAPPGQK 236
+ S R P K
Sbjct: 172 KSKSSGSRGRTSVSPWGK 189
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 80 bits (197), Expect = 1e-015
Identities = 48/138 (34%), Positives = 69/138 (50%), Gaps = 6/138 (4%)
Frame = -1
Query: 649 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVISHNPDNDTTRVKLPSGSKK 470
++G+ +PL + G ++ N+E + G + RA+G A ++ P +KLPSG K
Sbjct: 58 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGTNAKILK-EPAKGKCLIKLPSGDTK 116
Query: 469 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 290
+ + CRA IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 117 WINAKCRATIGTVSNPSHGTKKLYKAGQSRW-----LGIRPKVRGVAMNPCDHPHGGGEG 171
Query: 289 QHIGHASTVRRDAPPGQK 236
+ S R P K
Sbjct: 172 KSKSSGSRGRTSVSPWGK 189
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,739,744,934
Number of Sequences: 33410
Number of Extensions: 23739744934
Number of Successful Extensions: 745506947
Number of sequences better than 0.0: 0
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