BLASTX 7.6.2
Query= UN49935 /QuerySize=776
(775 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 fa... 271 5e-073
TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 fa... 271 5e-073
TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chlorop... 118 4e-027
TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chlorop... 118 4e-027
TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent ... 90 1e-018
TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo ... 79 2e-015
TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L... 76 2e-014
>TAIR9_protein||AT2G44065.1 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 271 bits (691), Expect = 5e-073
Identities = 130/145 (89%), Positives = 137/145 (94%)
Frame = -3
Query: 545 FGDVQNKTLVAEMVEKMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGT 366
F D QNK+LVA+M E+MLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGT
Sbjct: 34 FADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGT 93
Query: 365 NAKILKEPASGKCLIKLPSGDTRWINARCRDTIGTVSNLSHGVKKLYKAGQSRWLGIRPK 186
NAKILKEPA GKCLIKLPSGDT+WINA+CR TIGTVSN SHG KKLYKAGQSRWLGIRPK
Sbjct: 94 NAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPK 153
Query: 185 VRGVAMNPYDHPHGGGEGKSKSSGA 111
VRGVAMNP DHPHGGGEGKSKSSG+
Sbjct: 154 VRGVAMNPCDHPHGGGEGKSKSSGS 178
Score = 72 bits (176), Expect = 3e-013
Identities = 34/37 (91%)
Frame = -2
Query: 114 SRGRTSVSPWGKPCKGGYKSASVKKKKKRLAAREAKM 4
SRGRTSVSPWGKPCKGGYKSASVKKKKKRLA AKM
Sbjct: 178 SRGRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM 214
>TAIR9_protein||AT2G44065.2 | Symbols: | ribosomal protein L2 family protein |
chr2:18228860-18230368 FORWARD
Length = 215
Score = 271 bits (691), Expect = 5e-073
Identities = 130/145 (89%), Positives = 137/145 (94%)
Frame = -3
Query: 545 FGDVQNKTLVAEMVEKMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGT 366
F D QNK+LVA+M E+MLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAK+VRAAGT
Sbjct: 34 FADTQNKSLVAQMKEEMLHMDINSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKMVRAAGT 93
Query: 365 NAKILKEPASGKCLIKLPSGDTRWINARCRDTIGTVSNLSHGVKKLYKAGQSRWLGIRPK 186
NAKILKEPA GKCLIKLPSGDT+WINA+CR TIGTVSN SHG KKLYKAGQSRWLGIRPK
Sbjct: 94 NAKILKEPAKGKCLIKLPSGDTKWINAKCRATIGTVSNPSHGTKKLYKAGQSRWLGIRPK 153
Query: 185 VRGVAMNPYDHPHGGGEGKSKSSGA 111
VRGVAMNP DHPHGGGEGKSKSSG+
Sbjct: 154 VRGVAMNPCDHPHGGGEGKSKSSGS 178
Score = 72 bits (176), Expect = 3e-013
Identities = 34/37 (91%)
Frame = -2
Query: 114 SRGRTSVSPWGKPCKGGYKSASVKKKKKRLAAREAKM 4
SRGRTSVSPWGKPCKGGYKSASVKKKKKRLA AKM
Sbjct: 178 SRGRTSVSPWGKPCKGGYKSASVKKKKKRLAEAAAKM 214
>TAIR9_protein||ATCG00830.1 | Symbols: RPL2.1 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:84337-85843 REVERSE
Length = 275
Score = 118 bits (295), Expect = 4e-027
Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Frame = -3
Query: 470 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 291
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 290 NARCRDTIGTVSNLSHGVKKLYKAGQSRWLGIRPKVRGVAMNPYDHPHGGGEGKSKSSGA 111
+ C T+G V N+ K L +AG WLG RP VRGV MNP DHPHGGGEG+ A
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR-----A 237
Query: 110 EVGRR 96
+GR+
Sbjct: 238 PIGRK 242
>TAIR9_protein||ATCG01310.1 | Symbols: RPL2.2 | encodes a chloroplast ribosomal
protein L2, a constituent of the large subunit of the ribosomal complex
| chrC:152806-154312 FORWARD
Length = 275
Score = 118 bits (295), Expect = 4e-027
Identities = 61/125 (48%), Positives = 80/125 (64%), Gaps = 6/125 (4%)
Frame = -3
Query: 470 IGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKILKEPASGKCLIKLPSGDTRWI 291
+G+++PL M +GT IHNIE+ G+G +L RAAG AK++ + L KLPSG+ R I
Sbjct: 124 MGNALPLTDMPLGTAIHNIEITLGRGGQLARAAGAVAKLIAKEGKSATL-KLPSGEVRLI 182
Query: 290 NARCRDTIGTVSNLSHGVKKLYKAGQSRWLGIRPKVRGVAMNPYDHPHGGGEGKSKSSGA 111
+ C T+G V N+ K L +AG WLG RP VRGV MNP DHPHGGGEG+ A
Sbjct: 183 SKNCSATVGQVGNVGVNQKSLGRAGSKCWLGKRPVVRGVVMNPVDHPHGGGEGR-----A 237
Query: 110 EVGRR 96
+GR+
Sbjct: 238 PIGRK 242
>TAIR9_protein||AT3G51190.1 | Symbols: | structural constituent of ribosome |
chr3:19016606-19017547 REVERSE
Length = 261
Score = 90 bits (222), Expect = 1e-018
Identities = 58/162 (35%), Positives = 86/162 (53%), Gaps = 16/162 (9%)
Frame = -3
Query: 479 NSMIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGD 303
N M+G+ +PLG + G +I N+E++ G L RA+G A ++ P S +KLPSG
Sbjct: 96 NLMVGNVLPLGSIPEGAVICNVELHVGDRGALARASGDYAIVIAHNPESNTTRVKLPSGS 155
Query: 302 TRWINARCRDTIGTVSNLSHGVKKLYKAGQS--RWLGIR---PKVRGVAMNPYDHPHGGG 138
+ + + CR IG V+ K L KAG + ++ R P VRGVAMNP +HPHGGG
Sbjct: 156 KKILPSACRAMIGQVAGGGRTEKPLLKAGNAYHKYKAKRNCWPVVRGVAMNPVEHPHGGG 215
Query: 137 E----------GKSKSSGAEVGRRLALGGSRAKVVTSLLVSR 42
+ KS+GA+VG+ A R + + L ++
Sbjct: 216 NHQHIGHASTVRRDKSAGAKVGQIAARRTGRRRGAAATLAAK 257
>TAIR9_protein||AT2G18020.1 | Symbols: EMB2296 | EMB2296 (embryo defective
2296); structural constituent of ribosome | chr2:7837151-7838160
FORWARD
Length = 259
Score = 79 bits (194), Expect = 2e-015
Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 15/156 (9%)
Frame = -3
Query: 473 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGDTR 297
++G+ +PL + G ++ N+E + G L RA+G A ++ P S IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVVCNVEHHVGDRGVLARASGDYAIVIAHNPDSDTTRIKLPSGSKK 156
Query: 296 WINARCRDTIGTVSNLSHGVKKLYKAG---------QSRWLGIRPKVRGVAMNPYDHPHG 144
+ + CR IG V+ K + KAG ++ W PKVRGVAMNP +HPHG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNSW----PKVRGVAMNPVEHPHG 212
Query: 143 GGEGKSKSSGAEVGRRLALGGSRAKVVTSLLVSRRR 36
GG + + V RR A G + ++ + R R
Sbjct: 213 GGNHQHIGHASTV-RRDAPPGQKVGLIAARRTGRLR 247
>TAIR9_protein||AT4G36130.1 | Symbols: | 60S ribosomal protein L8 (RPL8C) |
chr4:17097613-17098656 FORWARD
Length = 259
Score = 76 bits (186), Expect = 2e-014
Identities = 51/152 (33%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
Frame = -3
Query: 473 MIGSSMPLGMMRIGTIIHNIEMNPGQGAKLVRAAGTNAKIL-KEPASGKCLIKLPSGDTR 297
++G+ +PL + G +I N+E + G RA+G A ++ P + IKLPSG +
Sbjct: 97 VVGNVLPLRSIPEGAVICNVEHHVGDRGVFARASGDYAIVIAHNPDNDTSRIKLPSGSKK 156
Query: 296 WINARCRDTIGTVSNLSHGVKKLYKAGQSRW-----LGIRPKVRGVAMNPYDHPHGGGEG 132
+ + CR IG V+ K + KAG + PKVRGVAMNP +HPHGGG
Sbjct: 157 IVPSGCRAMIGQVAGGGRTEKPMLKAGNAYHKYRVKRNCWPKVRGVAMNPVEHPHGGGNH 216
Query: 131 KSKSSGAEVGRRLALGGSRAKVVTSLLVSRRR 36
+ + V RR A G + ++ + R R
Sbjct: 217 QHIGHASTV-RRDAPPGKKVGLIAARRTGRLR 247
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,739,744,934
Number of Sequences: 33410
Number of Extensions: 23739744934
Number of Successful Extensions: 745506947
Number of sequences better than 0.0: 0
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