BLASTX 7.6.2
Query= UN49952 /QuerySize=1076
(1075 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO... 485 3e-137
TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 81 9e-016
TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulat... 81 9e-016
TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (... 81 9e-016
TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABI... 80 2e-015
TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABI... 80 2e-015
TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (... 78 1e-014
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 61 1e-009
TAIR9_protein||AT1G62240.1 | Symbols: | unknown protein | chr1:... 60 2e-009
TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family p... 57 1e-008
TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast... 57 1e-008
TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-... 56 3e-008
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 56 3e-008
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 52 6e-007
TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-re... 50 2e-006
TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular... 50 2e-006
TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular... 50 2e-006
TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological... 49 4e-006
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 49 5e-006
>TAIR9_protein||AT5G02810.1 | Symbols: PRR7, APRR7 | PRR7 (PSEUDO-RESPONSE
REGULATOR 7); transcription regulator/ two-component response regulator
| chr5:638283-641461 REVERSE
Length = 728
Score = 485 bits (1247), Expect = 3e-137
Identities = 248/299 (82%), Positives = 261/299 (87%), Gaps = 10/299 (3%)
Frame = -3
Query: 1073 RHRGAKDDETIVREDRNVLRRSEGSAFSRYNPALNNNKISGGNLGSNARHDNNCQELIKR 894
RHRG KDD T+VR+DRNVLRRSEGSAFSRYNPA N NKISGGNLGS + DNN Q+LIK+
Sbjct: 437 RHRGTKDDGTLVRDDRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKK 496
Query: 893 TEAACDCHSNMNESLPDNHHSRVGSNNVEMSSTTVNNAFTKPGDPKVSPAGSSSAKRSLF 714
TEAA DCHSNMNESLP NH S VGSNN +MSSTT NNAFTKPG PKVS AGSSS K S F
Sbjct: 497 TEAAYDCHSNMNESLPHNHRSHVGSNNFDMSSTTENNAFTKPGAPKVSSAGSSSVKHSSF 556
Query: 713 QPLPCDHH--HSSYNPVHVPER-KLPPQYGSSNVYNETVEGNNNNNNNNTVNYSVNGSGS 543
QPLPCDHH H+SYN VHV ER KLPPQ GSSNVYNET+EG NNNTVNYSVNGS S
Sbjct: 557 QPLPCDHHNNHASYNLVHVAERKKLPPQCGSSNVYNETIEG-----NNNTVNYSVNGSVS 611
Query: 542 GSGHGSNDPYGSSNGMNAGGVNMGSENGAGKSGSGSGDGSGSGSGSGSGNVADENKISQR 363
GSGHGSN PYGSSNGMNAGG+NMGS+NGAGK +G+GDGSGSGSGSGSGN+ADENKISQR
Sbjct: 612 GSGHGSNGPYGSSNGMNAGGMNMGSDNGAGK--NGNGDGSGSGSGSGSGNLADENKISQR 669
Query: 362 EAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDNDIKTPRDS* 186
EAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDNDIK DS*
Sbjct: 670 EAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATDDNDIKNIEDS* 728
>TAIR9_protein||AT2G46790.2 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19233422-19234901
FORWARD
Length = 352
Score = 81 bits (199), Expect = 9e-016
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Frame = -3
Query: 452 KSGSGSGDGSGSGSGSGSGNVADENKI------SQREAALTKFRQKRKERCFRKKVRYQS 291
++GS S + +G S + +E SQREAAL KFR KRK+RCF KKVRYQS
Sbjct: 265 EAGSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQS 324
Query: 290 RKKLAEQRPRVRGQFVR 240
RKKLAEQRPRV+GQFVR
Sbjct: 325 RKKLAEQRPRVKGQFVR 341
>TAIR9_protein||AT2G46670.1 | Symbols: | pseudo-response regulator, putative /
timing of CAB expression 1-like protein, putative |
chr2:19164589-19165233 REVERSE
Length = 184
Score = 81 bits (199), Expect = 9e-016
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Frame = -3
Query: 452 KSGSGSGDGSGSGSGSGSGNVADENKI------SQREAALTKFRQKRKERCFRKKVRYQS 291
++GS S + +G S + +E SQREAAL KFR KRK+RCF KKVRYQS
Sbjct: 97 EAGSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQS 156
Query: 290 RKKLAEQRPRVRGQFVR 240
RKKLAEQRPRV+GQFVR
Sbjct: 157 RKKLAEQRPRVKGQFVR 173
>TAIR9_protein||AT2G46790.1 | Symbols: APRR9, PRR9, TL1 | APRR9 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 9); protein binding / transcription
regulator/ two-component response regulator | chr2:19232874-19234901
FORWARD
Length = 469
Score = 81 bits (199), Expect = 9e-016
Identities = 45/77 (58%), Positives = 53/77 (68%), Gaps = 6/77 (7%)
Frame = -3
Query: 452 KSGSGSGDGSGSGSGSGSGNVADENKI------SQREAALTKFRQKRKERCFRKKVRYQS 291
++GS S + +G S + +E SQREAAL KFR KRK+RCF KKVRYQS
Sbjct: 382 EAGSQSTNEGIAGQSSSTEKPKEEESAKQRWSRSQREAALMKFRLKRKDRCFDKKVRYQS 441
Query: 290 RKKLAEQRPRVRGQFVR 240
RKKLAEQRPRV+GQFVR
Sbjct: 442 RKKLAEQRPRVKGQFVR 458
>TAIR9_protein||AT5G60100.1 | Symbols: APRR3, PRR3 | APRR3 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 3); transcription regulator/ two-component
response regulator | chr5:24198215-24200502 REVERSE
Length = 496
Score = 80 bits (197), Expect = 2e-015
Identities = 42/65 (64%), Positives = 48/65 (73%), Gaps = 5/65 (7%)
Frame = -3
Query: 416 GSGSGSGN-----VADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRG 252
GS S S N + ++ +QREAAL KFR KRKERCF KKVRY SRKKLAEQRP V+G
Sbjct: 420 GSSSSSDNPLKQQSSGSDRWAQREAALMKFRLKRKERCFEKKVRYHSRKKLAEQRPHVKG 479
Query: 251 QFVRK 237
QF+RK
Sbjct: 480 QFIRK 484
>TAIR9_protein||AT5G24470.1 | Symbols: APRR5, PRR5 | APRR5 (ARABIDOPSIS
PSEUDO-RESPONSE REGULATOR 5); transcription regulator/ two-component
response regulator | chr5:8356204-8358873 REVERSE
Length = 668
Score = 80 bits (196), Expect = 2e-015
Identities = 36/44 (81%), Positives = 42/44 (95%)
Frame = -3
Query: 368 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRK 237
QREAALTKFR KRK+RC+ KKVRY+SRKKLAEQRPR++GQFVR+
Sbjct: 617 QREAALTKFRMKRKDRCYEKKVRYESRKKLAEQRPRIKGQFVRQ 660
>TAIR9_protein||AT5G61380.1 | Symbols: TOC1, APRR1, PRR1 | TOC1 (TIMING OF CAB
EXPRESSION 1); transcription regulator/ two-component response
regulator | chr5:24675540-24678176 FORWARD
Length = 619
Score = 78 bits (190), Expect = 1e-014
Identities = 37/63 (58%), Positives = 48/63 (76%)
Frame = -3
Query: 425 SGSGSGSGSGNVADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQF 246
S S +G+ N NK+ +RE AL KFR+KR +RCF KK+RY +RK+LAE+RPRV+GQF
Sbjct: 513 SWSPAGNPPSNEVRVNKLDRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQF 572
Query: 245 VRK 237
VRK
Sbjct: 573 VRK 575
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 61 bits (147), Expect = 1e-009
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 4/72 (5%)
Frame = -3
Query: 437 SGDGSGSGSGSGSGNVADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRV 258
S DGS + G +D +REA + ++++KR+ R F KK+RY+ RK AEQRPR+
Sbjct: 325 SSDGSVTRQQGRDGGGSD----GEREARVLRYKEKRRTRLFSKKIRYEVRKLNAEQRPRI 380
Query: 257 RGQFVRKTAAAT 222
+G+FV++T+ T
Sbjct: 381 KGRFVKRTSLLT 392
>TAIR9_protein||AT1G62240.1 | Symbols: | unknown protein |
chr1:22994640-22995323 FORWARD
Length = 228
Score = 60 bits (144), Expect = 2e-009
Identities = 34/58 (58%), Positives = 39/58 (67%), Gaps = 4/58 (6%)
Frame = -3
Query: 557 NGSGSGSGHGSNDPYGSSNG---MNAGGVNMGSENGAGKSGSG-SGDGSGSGSGSGSG 396
NGSGSG+G+GS D SS+G +AGG G +G G G G SG GSGSGSGSGSG
Sbjct: 119 NGSGSGTGYGSGDGRVSSSGEYSASAGGGGSGEGSGGGGGGDGSSGSGSGSGSGSGSG 176
Score = 57 bits (135), Expect = 2e-008
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Frame = -3
Query: 602 GNNNNNNNNTVNYSVNGSGSGSGHG---SNDPYGSSNGMNAGGVNMGSENGAGKSG-SGS 435
G + +N + N S +G+G GSG G S+ Y +S G GG GS G G G SGS
Sbjct: 108 GGSGGSNGSFFNGSGSGTGYGSGDGRVSSSGEYSASAG--GGGSGEGSGGGGGGDGSSGS 165
Query: 434 GDGSGSGSGSGSGNVA 387
G GSGSGSGSG+G +
Sbjct: 166 GSGSGSGSGSGTGTAS 181
>TAIR9_protein||AT3G18810.1 | Symbols: | protein kinase family protein |
chr3:6480701-6483593 REVERSE
Length = 701
Score = 57 bits (137), Expect = 1e-008
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 5/119 (4%)
Frame = -3
Query: 749 PAGSSSAKRSLFQPLPCDHHHSSYNPVHVPERKLPPQYGSSNVYNETVEGNNNNNNNNTV 570
P SS+ P P D + S P + P G++N N+ GNNNN+NNN
Sbjct: 31 PPSDSSSPSPPAPPPPDDSSNGSPQPPSSDSQSPPSPQGNNN--NDGNNGNNNNDNNNNN 88
Query: 569 NYSVNGSGSGSGHGSNDPYGSSNGMNAGGVNMGSENGAGKSGSGSGDGSGSGSGSGSGN 393
N + N + + N+ G++N G N G++N + + D + +G GS N
Sbjct: 89 NGNNNNDNNNGNNKDNNNNGNNNN---GNNNNGNDNNGNNNNGNNNDNNNQNNGGGSNN 144
>TAIR9_protein||AT5G14370.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST Arabidopsis
thaliana protein match is: CIL (TAIR:AT4G25990.1); Has 1815 Blast hits
to 1506 proteins in 139 species: Archae - 0; Bacteria - 8; Metazoa -
291; Fungi - 53; Plants - 1145; Viruses - 0; Other Eukaryotes - 318
(source: NCBI BLink). | chr5:4632147-4633651 REVERSE
Length = 340
Score = 57 bits (137), Expect = 1e-008
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 6/73 (8%)
Frame = -3
Query: 437 SGDGSGSGSGSGSGNVADENKISQ------REAALTKFRQKRKERCFRKKVRYQSRKKLA 276
S DG G +G+ E + ++ REA+L ++++KR+ R F K++RYQ RK A
Sbjct: 264 SADGFNDGGEAGNLWAVPEMETTERLWRGHREASLLRYKEKRQNRLFSKRIRYQVRKLNA 323
Query: 275 EQRPRVRGQFVRK 237
E+RPRV+G+FV++
Sbjct: 324 EKRPRVKGRFVKR 336
>TAIR9_protein||AT4G25990.1 | Symbols: CIL | CIL | chr4:13191937-13193543
REVERSE
Length = 395
Score = 56 bits (134), Expect = 3e-008
Identities = 24/46 (52%), Positives = 37/46 (80%)
Frame = -3
Query: 365 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAA 228
REA++ ++++KR+ R F KK+RYQ RK A+QRPR++G+FVR+ A
Sbjct: 341 REASVLRYKEKRRNRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNA 386
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 56 bits (134), Expect = 3e-008
Identities = 24/48 (50%), Positives = 38/48 (79%)
Frame = -3
Query: 365 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAAT 222
REA++ ++++KR+ R F KK+RYQ RK A+QRPR++G+FVR+ +T
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQVRKLNADQRPRMKGRFVRRPNEST 430
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 52 bits (123), Expect = 6e-007
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = -3
Query: 365 REAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVRKTAAATD 219
REA + ++R+KRK R F K +RY SRK AE RPRV G+F ++ A +
Sbjct: 306 REARVLRYREKRKTRKFEKTIRYASRKAYAEIRPRVNGRFAKREIEAEE 354
>TAIR9_protein||AT1G04500.1 | Symbols: | zinc finger CONSTANS-related |
chr1:1221757-1224235 REVERSE
Length = 387
Score = 50 bits (119), Expect = 2e-006
Identities = 24/60 (40%), Positives = 36/60 (60%)
Frame = -3
Query: 419 SGSGSGSGNVADENKISQREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 240
+G S N + QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 270 TGLDDPSFNKVGKLSAEQRKEKIHRYMKKRNERNFSKKIKYACRKTLADSRPRVRGRFAK 329
>TAIR9_protein||AT2G33350.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7691 Blast hits to 4729 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 114; Plants
- 918; Viruses - 0; Other Eukaryotes - 6478 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 411
Score = 50 bits (118), Expect = 2e-006
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 368 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 240
QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 310 QRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 352
>TAIR9_protein||AT2G33350.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 7 plant structures; EXPRESSED
DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: zinc finger CONSTANS-related
(TAIR:AT1G04500.1); Has 7688 Blast hits to 4734 proteins in 129
species: Archae - 8; Bacteria - 25; Metazoa - 148; Fungi - 118; Plants
- 919; Viruses - 0; Other Eukaryotes - 6470 (source: NCBI BLink). |
chr2:14134116-14136836 FORWARD
Length = 410
Score = 50 bits (118), Expect = 2e-006
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 368 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 240
QR+ + ++ +KR ER F KK++Y RK LA+ RPRVRG+F +
Sbjct: 309 QRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK 351
>TAIR9_protein||AT1G63820.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: flower,
root; EXPRESSED DURING: petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: CCT domain (InterPro:IPR010402); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G41380.1); Has 907 Blast hits to 907 proteins in 64 species:
Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 882; Viruses
- 0; Other Eukaryotes - 24 (source: NCBI BLink). |
chr1:23682529-23684050 REVERSE
Length = 294
Score = 49 bits (116), Expect = 4e-006
Identities = 21/43 (48%), Positives = 31/43 (72%)
Frame = -3
Query: 368 QREAALTKFRQKRKERCFRKKVRYQSRKKLAEQRPRVRGQFVR 240
+R+ ++K+R KR +R F K ++Y RK LA+ RPRVRG+F R
Sbjct: 191 ERKEKISKYRAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR 233
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 49 bits (115), Expect = 5e-006
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 5/90 (5%)
Frame = -3
Query: 482 VNMGSENGAGKSGSGSGDGSGSGSGSGSGNV----ADENKISQ-REAALTKFRQKRKERC 318
+ GSE G+ S +G+ + + AD +++Q R A+ ++++KRK R
Sbjct: 341 ITFGSEKGSNSSSDLHFTEHIAGTSCKTTRLVATKADLERLAQNRGDAMQRYKEKRKTRR 400
Query: 317 FRKKVRYQSRKKLAEQRPRVRGQFVRKTAA 228
+ K +RY+SRK A+ R RVRG+FV+ + A
Sbjct: 401 YDKTIRYESRKARADTRLRVRGRFVKASEA 430
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,739,744,934
Number of Sequences: 33410
Number of Extensions: 23739744934
Number of Successful Extensions: 745506947
Number of sequences better than 0.0: 0
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