BLASTX 7.6.2
Query= UN50028 /QuerySize=817
(816 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q3SWZ6|SBDS_BOVIN Ribosome maturation protein SBDS OS=Bos tau... 252 3e-066
sp|P70122|SBDS_MOUSE Ribosome maturation protein SBDS OS=Mus mus... 250 1e-065
sp|Q5RK30|SBDS_RAT Ribosome maturation protein SBDS OS=Rattus no... 250 1e-065
sp|Q5ZIY4|SBDS_CHICK Ribosome maturation protein SBDS OS=Gallus ... 249 2e-065
sp|Q9Y3A5|SBDS_HUMAN Ribosome maturation protein SBDS OS=Homo sa... 249 2e-065
sp|Q5RAZ2|SBDS_PONAB Ribosome maturation protein SBDS OS=Pongo a... 249 2e-065
sp|A5D8M6|SBDS_XENLA Ribosome maturation protein SBDS OS=Xenopus... 247 7e-065
sp|Q6DIT8|SBDS_XENTR Ribosome maturation protein SBDS OS=Xenopus... 247 1e-064
sp|Q86KZ5|SBDS_DICDI Ribosome maturation protein SBDS OS=Dictyos... 219 2e-056
sp|Q23202|SBDS_CAEEL Ribosome maturation protein SBDS OS=Caenorh... 210 1e-053
sp|O14179|SDO1_SCHPO Ribosome maturation protein sdo1 OS=Schizos... 191 6e-048
sp|Q07953|SDO1_YEAST Ribosome maturation protein SDO1 OS=Sacchar... 153 2e-036
sp|Q58011|SDO1_METJA Ribosome maturation protein SDO1 homolog OS... 100 1e-020
sp|O59220|SDO1_PYRHO Ribosome maturation protein SDO1 homolog OS... 94 8e-019
sp|Q9V121|SDO1_PYRAB Ribosome maturation protein SDO1 homolog OS... 94 1e-018
sp|Q9YCU5|SDO1_AERPE Ribosome maturation protein SDO1 homolog OS... 89 3e-017
sp|Q8SUL0|SDO1_ENCCU Ribosome maturation protein SDO1 OS=Encepha... 83 2e-015
>sp|Q3SWZ6|SBDS_BOVIN Ribosome maturation protein SBDS OS=Bos taurus GN=SBDS
PE=2 SV=1
Length = 250
Score = 252 bits (642), Expect = 3e-066
Identities = 120/223 (53%), Positives = 166/223 (74%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK ++ ++ G + VC ++PG +RE++ L
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREVDEL 223
>sp|P70122|SBDS_MOUSE Ribosome maturation protein SBDS OS=Mus musculus GN=Sbds
PE=2 SV=4
Length = 250
Score = 250 bits (637), Expect = 1e-065
Identities = 121/223 (54%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK +V ++ + VC ++PG +REI+ L
Sbjct: 182 EGKKLKEKLKPL-MKVVESEDYSQQLEIVCLIDPGCFREIDEL 223
>sp|Q5RK30|SBDS_RAT Ribosome maturation protein SBDS OS=Rattus norvegicus
GN=Sbds PE=2 SV=1
Length = 250
Score = 250 bits (637), Expect = 1e-065
Identities = 121/223 (54%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRGGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIKQLKEKMKIERAHMRLRFLLPVN 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK +V ++ + VC ++PG +REI+ L
Sbjct: 182 EGKKLKEKLKPL-MKVVESEDYSQQLEIVCLIDPGCFREIDEL 223
>sp|Q5ZIY4|SBDS_CHICK Ribosome maturation protein SBDS OS=Gallus gallus GN=SBDS
PE=2 SV=1
Length = 250
Score = 249 bits (635), Expect = 2e-065
Identities = 120/223 (53%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR ++ G RFEIACY+NKV+ WRSG EKDIDEVLQ+HTV+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRARRAGKRFEIACYRNKVMGWRSGAEKDIDEVLQTHTVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DL++ FG+DD T+IC IL KGELQV+ KER++QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLVRAFGTDDQTEICKVILSKGELQVSDKERQTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V PN ++K+QAL+VIR+L++ I+R+ MRLR +P +
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKPNKSTKQQALEVIRQLKETMQIERAHMRLRFILPVK 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK ++ ++ + VC ++PG +REI+ L
Sbjct: 182 EGKKLKEKLKPL-IKVIENEDFHDQLEIVCLIDPGCFREIDEL 223
>sp|Q9Y3A5|SBDS_HUMAN Ribosome maturation protein SBDS OS=Homo sapiens GN=SBDS
PE=1 SV=4
Length = 250
Score = 249 bits (635), Expect = 2e-065
Identities = 120/223 (53%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V N ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK ++ ++ G + VC ++PG +REI+ L
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDEL 223
>sp|Q5RAZ2|SBDS_PONAB Ribosome maturation protein SBDS OS=Pongo abelii GN=SBDS
PE=2 SV=1
Length = 250
Score = 249 bits (635), Expect = 2e-065
Identities = 120/223 (53%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+K+ G RFEIACYKNKV+ WRSGVEKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKRAGKRFEIACYKNKVVGWRSGVEKDLDEVLQTHSVFVNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DLI FG+DD T+IC +IL KGE+QV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLISAFGTDDQTEICKQILTKGEVQVSDKERHTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT+ ++ER M +IH++V N ++K+QAL+VI++L++ I+R+ MRLR +P
Sbjct: 122 PETKRPYTVILIERAMKDIHYSVKTNKSTKQQALEVIKQLKEKMKIERAHMRLRFILPVN 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
L EKLK ++ ++ G + VC ++PG +REI+ L
Sbjct: 182 EGKKLKEKLKPL-IKVIESEDYGQQLEIVCLIDPGCFREIDEL 223
>sp|A5D8M6|SBDS_XENLA Ribosome maturation protein SBDS OS=Xenopus laevis GN=sbds
PE=2 SV=1
Length = 250
Score = 247 bits (630), Expect = 7e-065
Identities = 122/223 (54%), Positives = 165/223 (73%), Gaps = 1/223 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRSG EKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG AK +DL+K FG++D T+IC +IL KGELQV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQGAKKEDLLKAFGTEDQTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT++++ER M +IH++V ++K+QALDVI++L++ I+R+ MRLR VPA+
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFIVPAK 181
Query: 605 NFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
+ L EKLK + + + VC ++PG +REI+ L
Sbjct: 182 DGKKLKEKLKPL-IKHIESENFDQELEIVCLIDPGCFREIDEL 223
>sp|Q6DIT8|SBDS_XENTR Ribosome maturation protein SBDS OS=Xenopus tropicalis
GN=sbds PE=2 SV=1
Length = 250
Score = 247 bits (628), Expect = 1e-064
Identities = 124/226 (54%), Positives = 168/226 (74%), Gaps = 7/226 (3%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ P Q RLTNVAVVR+KK G RFEIACYKNKV+SWRSG EKD+DEVLQ+H+V+ NVS
Sbjct: 2 SIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFMNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG +AK +DL+K FG++D T+IC +IL KGELQV+ KER +QL FRDIATIV K +N
Sbjct: 62 KGQVAKKEDLLKSFGTEDPTEICKQILSKGELQVSEKERSTQLEQMFRDIATIVADKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
PET+RPYT++++ER M +IH++V ++K+QALDVI++L++ I+R+ MRLR +PA+
Sbjct: 122 PETKRPYTVNLIERAMKDIHYSVKATKSTKQQALDVIKQLKETMQIERAHMRLRFILPAK 181
Query: 605 NFSSLLEKLKEWDASLVSKDES---GTHMSAVCEMEPGLYREIEIL 733
+ L EKLK L+ ES + VC ++PG +REI+ L
Sbjct: 182 DGKKLKEKLK----PLIKHTESENFDQELEIVCLIDPGCFREIDEL 223
>sp|Q86KZ5|SBDS_DICDI Ribosome maturation protein SBDS OS=Dictyostelium
discoideum GN=sbds PE=3 SV=2
Length = 274
Score = 219 bits (557), Expect = 2e-056
Identities = 105/224 (46%), Positives = 160/224 (71%), Gaps = 1/224 (0%)
Frame = +2
Query: 65 TLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVS 244
++ PV K LTN+ VVR KK +FEIACY +KV S+RS +EKD++EV+Q H ++TNVS
Sbjct: 2 SIFTPVNNKTLTNIVVVRYKKGAAKFEIACYPSKVQSYRSKIEKDLNEVIQIHRIFTNVS 61
Query: 245 KGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTIN 424
KG++AK +LIK FG+D+ +I L ILEKGELQV+ KER++Q F+DIATIV +K +N
Sbjct: 62 KGIIAKKDELIKAFGTDNEQEIILLILEKGELQVSSKERDNQSEQTFKDIATIVAEKCVN 121
Query: 425 PETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
ETQRP +S++E+ M ++H+++ P +SK+Q+L+VI+++ PI+R+ MRL +T+P +
Sbjct: 122 TETQRPIPVSIIEKAMKDVHYSIHPTKSSKQQSLEVIKQISSVIPIQRAQMRLNITIPTK 181
Query: 605 NFSSL-LEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
+L +KL + + +D G +S VC ++PG YR+I+ L
Sbjct: 182 ESKTLNRDKLMVLVSKIEEEDRDGGGLSIVCLVDPGSYRKIDEL 225
>sp|Q23202|SBDS_CAEEL Ribosome maturation protein SBDS OS=Caenorhabditis elegans
GN=sbds-1 PE=2 SV=2
Length = 253
Score = 210 bits (533), Expect = 1e-053
Identities = 102/226 (45%), Positives = 156/226 (69%)
Frame = +2
Query: 56 MSKTLVQPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYT 235
MSK + P QK LTNVAVVR+KK G RFEIACYKNKV++WR+ EKDIDEVLQ+HTV++
Sbjct: 1 MSKNIKTPTNQKVLTNVAVVRMKKTGKRFEIACYKNKVVNWRNKSEKDIDEVLQTHTVFS 60
Query: 236 NVSKGVLAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQK 415
NVSKG L+K ++LI FG +D +IC IL+KG+LQV+ KER++ ++++ ++
Sbjct: 61 NVSKGQLSKKEELIAAFGIEDQLEICKIILDKGDLQVSEKERQAASDQSLKEVSQLIASM 120
Query: 416 TINPETQRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTV 595
+NPET+RP S++++ + E+HF++ PN +SK+QALD I +L++ I+R+ M++R+ +
Sbjct: 121 VVNPETKRPVPPSVIDKALQEMHFSLKPNRSSKQQALDAIPKLRETLKIERAKMKIRVAI 180
Query: 596 PAQNFSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
P + S+ KLK + + D + V +EPG +R ++ L
Sbjct: 181 PTKEAKSVHTKLKTLFSDVEVDDWQDGSLEMVGLIEPGSFRALDDL 226
>sp|O14179|SDO1_SCHPO Ribosome maturation protein sdo1 OS=Schizosaccharomyces
pombe GN=sdo1 PE=2 SV=1
Length = 246
Score = 191 bits (484), Expect = 6e-048
Identities = 100/222 (45%), Positives = 145/222 (65%), Gaps = 3/222 (1%)
Frame = +2
Query: 74 QPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGV 253
QPVGQ RLTNV+VV+ KK G RFE+ACYKNKV WR+ +E D+DEVLQ H V+ NVSKG
Sbjct: 5 QPVGQIRLTNVSVVKYKKGGKRFEVACYKNKVTEWRNKIETDLDEVLQIHNVFNNVSKGH 64
Query: 254 LAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPET 433
+A +DL K FG+DD KI LEIL+KG+ QV KER Q+SS +RDI + V ++P +
Sbjct: 65 VASRQDLKKAFGTDDIDKIILEILQKGDFQVGEKERHHQMSSTYRDIVSHVTAMCMDPNS 124
Query: 434 QRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIRELQK--HFPIKRSPMRLRLTVPAQN 607
+RPY S++E+ + + F+V + +K QAL+ I++LQ+ PI R+ MR+R+ V +
Sbjct: 125 KRPYPASIIEKALSDCGFSVSTSKTAKSQALEAIKKLQEKNEIPIVRARMRIRIVVDVKQ 184
Query: 608 FSSLLEKLKEWDASLVSKDESGTHMSAVCEMEPGLYREIEIL 733
+L E+L+ A + ++ + + PG Y+ I+ L
Sbjct: 185 GKALRERLRSL-ADEIEEENIDDEYECIALVIPGNYKLIDEL 225
>sp|Q07953|SDO1_YEAST Ribosome maturation protein SDO1 OS=Saccharomyces
cerevisiae GN=SDO1 PE=1 SV=1
Length = 250
Score = 153 bits (385), Expect = 2e-036
Identities = 83/196 (42%), Positives = 131/196 (66%), Gaps = 5/196 (2%)
Frame = +2
Query: 74 QPVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGV 253
QP GQ +LTNV++VRLKK RFE+ACY+NKV +R G+EKD+DEVLQ H V+ NVSKG+
Sbjct: 5 QPSGQIKLTNVSLVRLKKARKRFEVACYQNKVQDYRKGIEKDLDEVLQIHQVFMNVSKGL 64
Query: 254 LAKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPET 433
+A +DL K FG+ + + EI+ KGE+Q++ KER+ L+ ++ TIV K INP +
Sbjct: 65 VANKEDLQKCFGTTNVDDVIEEIMHKGEIQLSEKERQLMLNKVNNEMLTIVSAKCINPVS 124
Query: 434 QRPYTISMVERLMHEIHFAVDPNSNSKKQALDVIREL--QKHFPIKRSPMRLRLTV--PA 601
++ Y +M+ + + E+ F+ N +K QAL+ I+ L ++ PI R+ M++++ + P+
Sbjct: 125 KKRYPPTMIHKALQELKFSPVINKPAKLQALEAIKLLVSKQIIPIVRAKMKVKVAISEPS 184
Query: 602 QNFSSLLEKLKEWDAS 649
+ L+EK+ + AS
Sbjct: 185 RQ-PELIEKISKLIAS 199
>sp|Q58011|SDO1_METJA Ribosome maturation protein SDO1 homolog
OS=Methanocaldococcus jannaschii GN=MJ0592 PE=3 SV=1
Length = 240
Score = 100 bits (248), Expect = 1e-020
Identities = 56/209 (26%), Positives = 104/209 (49%)
Frame = +2
Query: 95 LTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDL 274
L + R G +FEI + G D DE+L V+ + SKG A + L
Sbjct: 9 LEEAVIARYTSHGEKFEILVDPYLAAKLKEGQNVDFDELLAIEVVFRDASKGEKAPEELL 68
Query: 275 IKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTIS 454
K+FG+ D +I +I+ KG++Q+ K+RE + R I TI+ + TINP+T P+
Sbjct: 69 SKIFGTTDVKEIAKKIILKGQVQLTAKQREEIREQKKRQIITIISRNTINPQTDTPHPPH 128
Query: 455 MVERLMHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQNFSSLLEKLK 634
+E+ M E+ +D ++++Q +++++L+K PI+ + + +PA+ S L
Sbjct: 129 RIEKAMEELRINIDIYKSAEEQVPEIVKKLKKVLPIRFEKRDIAVKIPAEFASKAYNALY 188
Query: 635 EWDASLVSKDESGTHMSAVCEMEPGLYRE 721
++ A + + + + E+ G+ E
Sbjct: 189 QFGAVKQEEWQPDGSLIVLIEIPSGIEAE 217
>sp|O59220|SDO1_PYRHO Ribosome maturation protein SDO1 homolog OS=Pyrococcus
horikoshii GN=PH1552 PE=3 SV=1
Length = 236
Score = 94 bits (233), Expect = 8e-019
Identities = 52/189 (27%), Positives = 100/189 (52%), Gaps = 2/189 (1%)
Frame = +2
Query: 110 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 289
+ RLK QG FEI ++ G I+E+L + V+ + KG A K++ K+FG
Sbjct: 10 IARLKIQGETFEILVDPYLARDFKEGKNVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
Query: 290 SDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTISMVERL 469
+ D ++ IL+KGE+Q+ ++R L + R IATI+ + ++P T P+ + + R
Sbjct: 70 TSDPYEVAKIILKKGEVQLTAQQRREMLEEKKRQIATIIHKHAVDPRTGYPHPVDRILRA 129
Query: 470 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQNFSSLLEKLKEWDAS 649
M E+ VD +++ Q DVI+ L++ P++ + + +P + +++++
Sbjct: 130 MEEVGVRVDIFKDAEAQVQDVIKALRRVLPLRIEMKVIAVKIPGEYVGRSYGEVRKF--G 187
Query: 650 LVSKDESGT 676
+ K+E G+
Sbjct: 188 RIKKEEWGS 196
>sp|Q9V121|SDO1_PYRAB Ribosome maturation protein SDO1 homolog OS=Pyrococcus
abyssi GN=PYRAB06080 PE=3 SV=1
Length = 236
Score = 94 bits (231), Expect = 1e-018
Identities = 48/165 (29%), Positives = 89/165 (53%)
Frame = +2
Query: 110 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 289
+ RLK G FEI ++ G E I+E+L + V+ + KG A K++ K+FG
Sbjct: 10 IARLKVHGETFEILVDPYLARDFKEGKEVPIEEILATPYVFKDAHKGDKASEKEMEKIFG 69
Query: 290 SDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTISMVERL 469
+ D ++ IL KGE+Q+ ++R L + R IATI+ + ++P T P+ + + R
Sbjct: 70 TSDPYEVAKIILRKGEVQLTAQQRREMLEEKKRQIATIIHRHAVDPRTGYPHPVDRILRA 129
Query: 470 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVPAQ 604
M E+ VD +++ Q DVI+ +++ P++ + + +P++
Sbjct: 130 MEEVGVRVDIFKDAEAQVQDVIKAIRRILPLRIEMKVIAVKIPSE 174
>sp|Q9YCU5|SDO1_AERPE Ribosome maturation protein SDO1 homolog OS=Aeropyrum
pernix GN=APE_1167.1 PE=3 SV=2
Length = 233
Score = 89 bits (219), Expect = 3e-017
Identities = 43/163 (26%), Positives = 93/163 (57%)
Frame = +2
Query: 110 VVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVLAKSKDLIKVFG 289
V ++ +G RFEI ++ + D+++VL + T+Y +V KG+ A +++ K FG
Sbjct: 9 VAWMEVRGKRFEILVRPELAFRYKEKGDVDLEDVLWTDTIYRDVRKGLKASPEEVKKAFG 68
Query: 290 SDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQRPYTISMVERL 469
+ D ++ +IL++GE+Q+ ++R L ++ R I + + + I+P T RP + +E
Sbjct: 69 TSDPRRVAEKILKEGEIQLTEEQRRRLLEAKRRQIISYIARNAIDPTTGRPIPEARIEAA 128
Query: 470 MHEIHFAVDPNSNSKKQALDVIRELQKHFPIKRSPMRLRLTVP 598
+ E+ F ++ +++ QA++ +R + + PI+ + L + +P
Sbjct: 129 LEEVRFPINLWRDAESQAVEAVRLIARVMPIRLARALLEVKIP 171
>sp|Q8SUL0|SDO1_ENCCU Ribosome maturation protein SDO1 OS=Encephalitozoon
cuniculi GN=SDO1 PE=1 SV=1
Length = 223
Score = 83 bits (204), Expect = 2e-015
Identities = 55/160 (34%), Positives = 91/160 (56%), Gaps = 10/160 (6%)
Frame = +2
Query: 77 PVGQKRLTNVAVVRLKKQGNRFEIACYKNKVLSWRSGVEKDIDEVLQSHTVYTNVSKGVL 256
P+ QK+L NV++V LKK G R+E+A Y NK+ +R+G+ + E+LQ+ T+Y +VSKG +
Sbjct: 4 PLNQKKLVNVSIVTLKKFGRRYELAVYPNKLYEYRNGMRTPLSEILQTDTIYRSVSKGEI 63
Query: 257 AKSKDLIKVFGSDDHTKICLEILEKGELQVAGKERESQLSSQFRDIATIVMQKTINPETQ 436
A+ DL +F H +I EIL+ G Q + R + R+I I+ K + +
Sbjct: 64 ARQGDL-DLF-CRTHEEIVREILDCGYEQKSEATRVYEQEKTEREIVQILRNK-VTRGGR 120
Query: 437 RPYTISMVERL--MHEIHFAVDPNSNSKKQALDVIRELQK 550
S+ E + +H I+ NSKKQ+ +++ +L+K
Sbjct: 121 HLSEASLREAIGKVHNIYV-----GNSKKQSQEILSKLEK 155
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,100,387,091
Number of Sequences: 518415
Number of Extensions: 186100387091
Number of Successful Extensions: 1135017718
Number of sequences better than 0.0: 0
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