BLASTX 7.6.2
Query= UN50033 /QuerySize=1296
(1295 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT... 386 7e-105
gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabi... 373 4e-101
gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 k... 370 4e-100
gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabido... 362 9e-098
gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing f... 302 1e-079
gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vini... 296 8e-078
gi|225449547|ref|XP_002283722.1| PREDICTED: hypothetical protein... 285 1e-074
gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT... 279 1e-072
gi|194700364|gb|ACF84266.1| unknown [Zea mays] 265 1e-068
gi|194706612|gb|ACF87390.1| unknown [Zea mays] 259 8e-067
gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays] 259 8e-067
gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays] 259 1e-066
gi|194699092|gb|ACF83630.1| unknown [Zea mays] 258 1e-066
gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryz... 258 1e-066
gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japo... 257 5e-066
gi|224098431|ref|XP_002311171.1| predicted protein [Populus tric... 247 5e-063
gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryz... 246 9e-063
gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryz... 246 9e-063
gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japo... 243 6e-062
gi|224112763|ref|XP_002316285.1| predicted protein [Populus tric... 237 3e-060
>gi|297816842|ref|XP_002876304.1| hypothetical protein ARALYDRAFT_485973
[Arabidopsis lyrata subsp. lyrata]
Length = 260
Score = 386 bits (989), Expect = 7e-105
Identities = 197/246 (80%), Positives = 202/246 (82%), Gaps = 12/246 (4%)
Frame = -2
Query: 1210 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEE 1031
RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGR+GSSHGSLLVRN+PLDCRPEE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPEE 61
Query: 1030 LRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVV 851
LRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRR+F GREITVVV
Sbjct: 62 LRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRIFAGREITVVV 121
Query: 850 ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYS 671
ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSR RSRSYS
Sbjct: 122 ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRYRSRSYS 181
Query: 670 PAPRRRGADYSASPRRRQEERPRSP-----LRSPPRGEGDAKYSRRSYSPGYEGAATAAE 506
PAPRRRG + R SP +P R R PGYE AE
Sbjct: 182 PAPRRRGGPPRGEEDGKYSRRSYSPGYEGATAAPDRDRNGDNEIRE--KPGYE-----AE 234
Query: 505 DRDTNG 488
DR G
Sbjct: 235 DRLRGG 240
>gi|18410283|ref|NP_567021.1| SC35-like splicing factor 30 [Arabidopsis
thaliana]
Length = 262
Score = 373 bits (957), Expect = 4e-101
Identities = 194/248 (78%), Positives = 198/248 (79%), Gaps = 14/248 (5%)
Frame = -2
Query: 1210 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPE 1034
RRYSPPYYSPPRRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRN+PLDCRPE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 1033 ELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVV 854
ELR PFERFGPVRDVYIPRDYYSG+PRGFAFVEFVDAYDAGEAQRSMNRR F GREITVV
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV 121
Query: 853 VASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSY 674
VASESRKRPEEMRVKTRTRSREPSGSR RSHGRSRSRSISRSRSPRRPSDSRSR RSRSY
Sbjct: 122 VASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRSY 181
Query: 673 SPAPRRRGADYSASPRRRQEERPRSP------LRSPPRGEGDAKYSRRSYSPGYEGAATA 512
SPAPRRRG R SP +P R R PGYE
Sbjct: 182 SPAPRRRGGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGDNEIRE--KPGYE----- 234
Query: 511 AEDRDTNG 488
AEDR G
Sbjct: 235 AEDRRRGG 242
>gi|9843657|emb|CAC03602.1| SC35-like splicing factor SCL30, 30 kD [Arabidopsis
thaliana]
Length = 262
Score = 370 bits (948), Expect = 4e-100
Identities = 193/248 (77%), Positives = 197/248 (79%), Gaps = 14/248 (5%)
Frame = -2
Query: 1210 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPE 1034
RRYSPPYYSP RRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRN+PLDCRPE
Sbjct: 2 RRYSPPYYSPXRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 1033 ELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVV 854
ELR PFERFGPVRDVYIPRDYYSG+PRGFAFVEFVDAYDAGEAQRSMNRR F GREITVV
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFSGREITVV 121
Query: 853 VASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSY 674
VASESRKRPEEMRVKTRTRSREPSGSR RSHGRSRSRSISRSRSPRRPSDSRSR RSRSY
Sbjct: 122 VASESRKRPEEMRVKTRTRSREPSGSRDRSHGRSRSRSISRSRSPRRPSDSRSRYRSRSY 181
Query: 673 SPAPRRRGADYSASPRRRQEERPRSP------LRSPPRGEGDAKYSRRSYSPGYEGAATA 512
SPAPRRRG R SP +P R R PGYE
Sbjct: 182 SPAPRRRGGPPRGEEDENYSRRSYSPGYEGAAAAAPDRDRNGDNEIRE--KPGYE----- 234
Query: 511 AEDRDTNG 488
AEDR G
Sbjct: 235 AEDRRRGG 242
>gi|7076789|emb|CAB75904.1| putative RNA binding protein [Arabidopsis thaliana]
Length = 309
Score = 362 bits (928), Expect = 9e-098
Identities = 190/259 (73%), Positives = 197/259 (76%), Gaps = 13/259 (5%)
Frame = -2
Query: 1210 RRYSPPYYSPPRRGYGGRGRS-PPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPE 1034
RRYSPPYYSPPRRGYGGRGRS PPPPPRRGYGGGGGGGGR+GSSHGSLLVRN+PLDCRPE
Sbjct: 2 RRYSPPYYSPPRRGYGGRGRSPPPPPPRRGYGGGGGGGGRRGSSHGSLLVRNIPLDCRPE 61
Query: 1033 ELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVV 854
ELR PFERFGPVRDVYIPRDYYSG+PRGFAFVEFVDAYDAGEAQRSMNRR F GREITVV
Sbjct: 62 ELREPFERFGPVRDVYIPRDYYSGQPRGFAFVEFVDAYDAGEAQRSMNRRSFAGREITVV 121
Query: 853 VASESRKRPEEMRVKTRTRSREPSGSRGRSHGR-----------SRSRSISRSRSPRRPS 707
VASESRKRPEEMRVKTRTRSREPSGSR RSH + + + S
Sbjct: 122 VASESRKRPEEMRVKTRTRSREPSGSRDRSHAKFTQILAQLDWDALVYTQLEKALVYTCS 181
Query: 706 DSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYE 527
RSR RS S S +PRR S R PR PPRGE D YSRRSYSPGYE
Sbjct: 182 HGRSRSRSISRSRSPRRPSDSRSRYRSRSYSPAPRR-RGGPPRGEEDENYSRRSYSPGYE 240
Query: 526 GAATAAEDRDTNGDNETRE 470
GAA AA DRD NGDNE RE
Sbjct: 241 GAAAAAPDRDRNGDNEIRE 259
>gi|255584869|ref|XP_002533150.1| serine/arginine rich splicing factor, putative
[Ricinus communis]
Length = 265
Score = 302 bits (772), Expect = 1e-079
Identities = 158/225 (70%), Positives = 174/225 (77%), Gaps = 9/225 (4%)
Frame = -2
Query: 1204 YSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELR 1025
YSPPYYSPPRRGYGGRGRS PPRRG+GGGGG G RK +HGSLLVRN+PLDCRPEELR
Sbjct: 4 YSPPYYSPPRRGYGGRGRS---PPRRGHGGGGGYGRRKEQNHGSLLVRNIPLDCRPEELR 60
Query: 1024 VPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVAS 845
PFERFG VRDVYIP+DYY+GEPRGFAFV+FVD YDA EAQ MN ++F GREI+VVVA+
Sbjct: 61 APFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDTYDAMEAQHRMNGQIFAGREISVVVAA 120
Query: 844 ESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPA 665
E+RKRPEEMR R+R PSG GRS RSRS S S SPR SRSR RSRS+SPA
Sbjct: 121 ETRKRPEEMR--QRSRIGRPSGYGGRSSYYGRSRSRSLSHSPRHHLGSRSRYRSRSFSPA 178
Query: 664 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGY 530
PRRR DYSASP RR + RSP PP +GD + RSYSPGY
Sbjct: 179 PRRR--DYSASPGRRHADHARSPSGLPPGRDGD--HIHRSYSPGY 219
>gi|296086246|emb|CBI31687.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 296 bits (756), Expect = 8e-078
Identities = 160/234 (68%), Positives = 179/234 (76%), Gaps = 15/234 (6%)
Frame = -2
Query: 1210 RRYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEE 1031
RRYSPPYYS PRRGYGGR RS PPRRGY GG G RK +HGSLLVRN+PL+CRPE+
Sbjct: 79 RRYSPPYYSAPRRGYGGRERS---PPRRGY---GGYGRRKEQNHGSLLVRNIPLNCRPED 132
Query: 1030 LRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVV 851
LRVPFERFG VRDVY+P+DYY+GEPRGFAFV+FVD Y+A EAQ MN ++F GREI+VVV
Sbjct: 133 LRVPFERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISVVV 192
Query: 850 ASESRKRPEEMRVKTRTRSREPS---GSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSR 680
A+E+RKRPEEMR TR R R PS G R +G SRSRS+SRSRSP R R RSR
Sbjct: 193 AAETRKRPEEMR--TRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRLLSGSRRYRSR 250
Query: 679 SYSPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAA 518
SYSP PRRRG DYS SPRRR E PRSP PP +GD + RRSYSPGY+ AA
Sbjct: 251 SYSPVPRRRG-DYSVSPRRR-VEHPRSPRDHPPERDGD--HIRRSYSPGYDDAA 300
>gi|225449547|ref|XP_002283722.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 276
Score = 285 bits (728), Expect = 1e-074
Identities = 155/229 (67%), Positives = 174/229 (75%), Gaps = 15/229 (6%)
Frame = -2
Query: 1195 PYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPF 1016
PYYS PRRGYGGR RS PPRRGY GG G RK +HGSLLVRN+PL+CRPE+LRVPF
Sbjct: 7 PYYSAPRRGYGGRERS---PPRRGY---GGYGRRKEQNHGSLLVRNIPLNCRPEDLRVPF 60
Query: 1015 ERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESR 836
ERFG VRDVY+P+DYY+GEPRGFAFV+FVD Y+A EAQ MN ++F GREI+VVVA+E+R
Sbjct: 61 ERFGLVRDVYLPKDYYTGEPRGFAFVQFVDPYEASEAQYHMNGQIFAGREISVVVAAETR 120
Query: 835 KRPEEMRVKTRTRSREPS---GSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPA 665
KRPEEMR TR R R PS G R +G SRSRS+SRSRSP R R RSRSYSP
Sbjct: 121 KRPEEMR--TRARVRGPSSYGGRRSSYYGGSRSRSVSRSRSPPRLLSGSRRYRSRSYSPV 178
Query: 664 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAA 518
PRRRG DYS SPRRR E PRSP PP +GD + RRSYSPGY+ AA
Sbjct: 179 PRRRG-DYSVSPRRR-VEHPRSPRDHPPERDGD--HIRRSYSPGYDDAA 223
>gi|242072089|ref|XP_002451321.1| hypothetical protein SORBIDRAFT_05g027700
[Sorghum bicolor]
Length = 270
Score = 279 bits (712), Expect = 1e-072
Identities = 159/247 (64%), Positives = 179/247 (72%), Gaps = 26/247 (10%)
Frame = -2
Query: 1195 PYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHG--SLLVRNVPLDCRPEELRV 1022
P YSPPRRGYGGRGRS PPPRRGYGGGGG G HG SLLVRN+PL CRPEELRV
Sbjct: 6 PAYSPPRRGYGGRGRS--PPPRRGYGGGGGRG-----DHGSVSLLVRNIPLRCRPEELRV 58
Query: 1021 PFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASE 842
PFERFGPVRDVY+PRDY++GEPRGF FVEFVDAYDA EAQ MNR++F GREITVV+A++
Sbjct: 59 PFERFGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAAD 118
Query: 841 SRKRPEEMRVKTRTRSREPSGSRGR---SHGRSRSRSISRSRSPRRPSDSRSRRRSRSYS 671
+RKRPE+MR RT R SG GR HGRSRSRS SRSRSPR R R RS+SYS
Sbjct: 119 TRKRPEDMR--RRTGPRGYSGHEGRRPYRHGRSRSRSYSRSRSPR----PRGRGRSQSYS 172
Query: 670 PAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTN 491
PAP+RR DYSASP R +EE PRS + P + D K RRSY+P AE N
Sbjct: 173 PAPKRRD-DYSASPPRSKEENPRSS-KQPKENDRDKK--RRSYTPDDRNDRRGAE----N 224
Query: 490 GDNETRE 470
G +E ++
Sbjct: 225 GHDERKK 231
>gi|194700364|gb|ACF84266.1| unknown [Zea mays]
Length = 267
Score = 265 bits (676), Expect = 1e-068
Identities = 148/221 (66%), Positives = 165/221 (74%), Gaps = 21/221 (9%)
Frame = -2
Query: 1189 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFER 1010
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRN+PL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 1009 FGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKR 830
FGPVRDVY+PRDY++GEPRGF FVEFVDAYDA EAQ MNR++F GREITVV+A+++RKR
Sbjct: 61 FGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAADTRKR 120
Query: 829 PEEMRVKTRTRSREPSGSRGR---SHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPR 659
PE+MR RT R SG GR HGRSRSRS SRSRSPR R R RS+SYSPAP+
Sbjct: 121 PEDMR--RRTGPRGYSGHEGRRPNRHGRSRSRSYSRSRSPR----PRGRGRSQSYSPAPK 174
Query: 658 RRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSP 536
RR DYSASP R +EE PRS + P D RRSY+P
Sbjct: 175 RRD-DYSASPPRAKEEHPRSS-KQPKENNRD---RRRSYTP 210
>gi|194706612|gb|ACF87390.1| unknown [Zea mays]
Length = 269
Score = 259 bits (661), Expect = 8e-067
Identities = 146/223 (65%), Positives = 163/223 (73%), Gaps = 23/223 (10%)
Frame = -2
Query: 1189 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFER 1010
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRN+PL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 1009 FGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKR 830
FGPVRDVY+PRDY++GEPRGF FVEFVDAYDA EAQ MNR++F GREITVV+A+++RKR
Sbjct: 61 FGPVRDVYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAADTRKR 120
Query: 829 PEEMRVKTRTRSREPSGSRGR-----SHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPA 665
PE+MR RT R SG GR GRSRSRS SRSRSPR R R RS+SYSP
Sbjct: 121 PEDMR--RRTGPRGYSGHEGRRPNRHGAGRSRSRSYSRSRSPR----PRGRGRSQSYSPV 174
Query: 664 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSP 536
P+RR DYSASP R +EE PRS + P D RRSY+P
Sbjct: 175 PKRRD-DYSASPPRAKEEHPRSS-KQPKENNRD---RRRSYTP 212
>gi|226492712|ref|NP_001150206.1| LOC100283836 [Zea mays]
Length = 258
Score = 259 bits (661), Expect = 8e-067
Identities = 157/237 (66%), Positives = 168/237 (70%), Gaps = 21/237 (8%)
Frame = -2
Query: 1186 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFERF 1007
SPPRRGYGGRGRS PPPPRRGY GGRK S GSLLVRN+PL R E+LRVPFERF
Sbjct: 10 SPPRRGYGGRGRS-PPPPRRGY------GGRKEGS-GSLLVRNIPLSVRAEDLRVPFERF 61
Query: 1006 GPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRP 827
GPVRDVYIP+DYYSGEPRGFAFVEFVD YDA EAQ MNR+VF GREI VV+A+ESRKRP
Sbjct: 62 GPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRP 121
Query: 826 EEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGA 647
EEMR +RTR R SG GR RS SRSRSPR R R RSRSYSPAP RRG
Sbjct: 122 EEMR--SRTRVRGYSGHEGR---RSSYYGRSRSRSPR----YRGRPRSRSYSPAP-RRGN 171
Query: 646 DYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSP-GYEGAATAAEDRDTNGDNE 479
DYSASP RRQE SP R PP+ E D RRSYSP + A E R D++
Sbjct: 172 DYSASP-RRQEAHRSSPPRRPPK-EHDEDKKRRSYSPASRDDADNVYEKRSPPADSD 226
>gi|195625068|gb|ACG34364.1| SR repressor protein [Zea mays]
Length = 269
Score = 259 bits (660), Expect = 1e-066
Identities = 146/223 (65%), Positives = 163/223 (73%), Gaps = 23/223 (10%)
Frame = -2
Query: 1189 YSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFER 1010
YSPPRRG+GGRGRS PPPRRGYGGG G G SLLVRN+PL CRPEELRVPFER
Sbjct: 8 YSPPRRGHGGRGRS--PPPRRGYGGGRGDHGSV-----SLLVRNIPLRCRPEELRVPFER 60
Query: 1009 FGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKR 830
FGPVRD Y+PRDY++GEPRGF FVEFVDAYDA EAQ MNR++F GREITVV+A+++RKR
Sbjct: 61 FGPVRDFYLPRDYHTGEPRGFGFVEFVDAYDASEAQYHMNRQMFAGREITVVLAADTRKR 120
Query: 829 PEEMRVKTRTRSREPSGSRGR-----SHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPA 665
PE+MR RT R SG GR GRSRSRS SRSRSPR R R RS+SYSPA
Sbjct: 121 PEDMR--RRTGPRGYSGHEGRRPNRHGAGRSRSRSYSRSRSPR----PRGRGRSQSYSPA 174
Query: 664 PRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSP 536
P+RR DYSASP R +EE PRS + P D RRSY+P
Sbjct: 175 PKRRD-DYSASPPRAKEEHPRSS-KQPKENNRD---RRRSYTP 212
>gi|194699092|gb|ACF83630.1| unknown [Zea mays]
Length = 258
Score = 258 bits (659), Expect = 1e-066
Identities = 154/237 (64%), Positives = 167/237 (70%), Gaps = 21/237 (8%)
Frame = -2
Query: 1186 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFERF 1007
SPPRRGYGGRGRS PPPPRRGY GGRK S GSLLVRN+PL R E+LRVPFERF
Sbjct: 10 SPPRRGYGGRGRS-PPPPRRGY------GGRKEGS-GSLLVRNIPLSVRAEDLRVPFERF 61
Query: 1006 GPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRP 827
GPVRDVYIP+DYYSGEPRGFAFVEFVD YDA EAQ MNR+VF GREI VV+A+ESRKRP
Sbjct: 62 GPVRDVYIPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREIAVVLAAESRKRP 121
Query: 826 EEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGA 647
EEMR +RTR R SG GR RS SRSRSPR R R RSRSYSPAP RRG
Sbjct: 122 EEMR--SRTRVRGYSGHEGR---RSSYYGRSRSRSPR----YRGRPRSRSYSPAP-RRGN 171
Query: 646 DYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSP-GYEGAATAAEDRDTNGDNE 479
DYSASPRR++ R P R P + D K RRSYSP + A E R D++
Sbjct: 172 DYSASPRRQEAHRSSPPRRLPKEHDEDKK--RRSYSPASRDDADNVYEKRSPPADSD 226
>gi|218187112|gb|EEC69539.1| hypothetical protein OsI_38819 [Oryza sativa Indica
Group]
Length = 263
Score = 258 bits (659), Expect = 1e-066
Identities = 152/241 (63%), Positives = 169/241 (70%), Gaps = 29/241 (12%)
Frame = -2
Query: 1186 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFERF 1007
SPPRRGYGGRGRS PPRRGY GGR+ GSLLVRN+PL CR E+LRVPFERF
Sbjct: 10 SPPRRGYGGRGRS---PPRRGY------GGRREQGSGSLLVRNIPLSCRGEDLRVPFERF 60
Query: 1006 GPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRP 827
GPVRDVY+P+DYYSGEPRGFAFVEFVD YDA EAQ MNR+VF GREITVV+A+ESRKRP
Sbjct: 61 GPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRP 120
Query: 826 EEMRVKTRTRSREPSGSRGRS---HGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRR 656
EEMR +R R R SG+ GR +GRSR SRSRSPR R R RSRSYSPAPRR
Sbjct: 121 EEMR--SRARVRGYSGNEGRRSSYYGRSR----SRSRSPR----YRGRPRSRSYSPAPRR 170
Query: 655 RGADYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNGDNET 476
R DYSASP R+ +SP R P E D + RRSYSP A+ + RD + E
Sbjct: 171 RD-DYSASPPRKDTHPTKSPRRQPK--EHDEEKKRRSYSP----ASRDGDPRDADNGYEK 223
Query: 475 R 473
R
Sbjct: 224 R 224
>gi|115489208|ref|NP_001067091.1| Os12g0572400 [Oryza sativa Japonica Group]
Length = 263
Score = 257 bits (654), Expect = 5e-066
Identities = 148/238 (62%), Positives = 164/238 (68%), Gaps = 23/238 (9%)
Frame = -2
Query: 1186 SPPRRGYGGRGRSPPPPPRRGYGGGGGGGGRKGSSHGSLLVRNVPLDCRPEELRVPFERF 1007
SPPRRGYGGRGRS PPRRGY GGR+ GSLLVRN+PL CR E+LRVPFERF
Sbjct: 10 SPPRRGYGGRGRS---PPRRGY------GGRREQGSGSLLVRNIPLSCRGEDLRVPFERF 60
Query: 1006 GPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRP 827
GPVRDVY+P+DYYSGEPRGFAFVEFVD YDA EAQ MNR+VF GREITVV+A+ESRKRP
Sbjct: 61 GPVRDVYLPKDYYSGEPRGFAFVEFVDPYDASEAQYHMNRQVFFGREITVVLAAESRKRP 120
Query: 826 EEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGA 647
EEMR +R R R SG+ GR RS RSRS R R R RSRSYSPAPRRR
Sbjct: 121 EEMR--SRARVRGYSGNEGR-----RSSYYGRSRSRSRSPHYRGRPRSRSYSPAPRRRD- 172
Query: 646 DYSASPRRRQEERPRSPLRSPPRGEGDAKYSRRSYSPGYEGAATAAEDRDTNGDNETR 473
DYSASP R+ +SP R P E D + RRSYSP A+ + RD + E R
Sbjct: 173 DYSASPPRKDTHPTKSPRRQPK--EHDEEKKRRSYSP----ASRDGDPRDADNGYEKR 224
>gi|224098431|ref|XP_002311171.1| predicted protein [Populus trichocarpa]
Length = 272
Score = 247 bits (628), Expect = 5e-063
Identities = 138/214 (64%), Positives = 155/214 (72%), Gaps = 10/214 (4%)
Frame = -2
Query: 1207 RYSPPYYSPPRRGYGGRGRSPPPPPRRGYGGGGGGGGR-KGSSHGSLLVRNVPLDCRPEE 1031
RYSPP+YS PRRG+GGRGRS PPRRG GGGGG GR K GSLLVRN+P DCRPEE
Sbjct: 3 RYSPPHYSSPRRGHGGRGRS---PPRRGRGGGGGRYGRSKDQDSGSLLVRNIPRDCRPEE 59
Query: 1030 LRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVV 851
LR FERFG VRDVYIP+DY++GEPRGF FV+FV+ DA EAQ MN +VF GR++ VVV
Sbjct: 60 LRGMFERFGVVRDVYIPKDYHTGEPRGFGFVQFVEPSDAMEAQHHMNGQVFAGRQMFVVV 119
Query: 850 ASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYS 671
A+E+RKRPEEMR RTR R P+ GRS RSRS S SRSPR SRS R RSYS
Sbjct: 120 AAETRKRPEEMR--HRTRVRGPADHGGRSSYSRRSRSRSFSRSPRHYHVSRS--RYRSYS 175
Query: 670 PAPRRRGADYSASPRRRQEERPRSPLRSPPRGEG 569
PAP+RR DYS SP RR + RSP PP +G
Sbjct: 176 PAPQRR--DYSPSPERRYADHLRSPRGPPPERDG 207
>gi|218190416|gb|EEC72843.1| hypothetical protein OsI_06591 [Oryza sativa Indica
Group]
Length = 289
Score = 246 bits (626), Expect = 9e-063
Identities = 145/245 (59%), Positives = 161/245 (65%), Gaps = 34/245 (13%)
Frame = -2
Query: 1189 YSPPRRGYGGRGRSPPPPPRRGYGGGG------GGGGRKGSSHGSLLVRNVPLDCRPEEL 1028
YSPP R PPRRGYGG G G GGRK GSLLVRN+PL CR E+L
Sbjct: 28 YSPPYRS----------PPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDL 77
Query: 1027 RVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVA 848
RVPFERFGPVRDVY+P+DYY+GEPRGFAFVEFVD YDA EAQ MNR+V GREITVV+A
Sbjct: 78 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 137
Query: 847 SESRKRPEEMRVKTRTRS-REPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYS 671
+ESRKRPEEMR + R R + G R +GRSRSR SRSRSPR R R RSRSYS
Sbjct: 138 AESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSR--SRSRSPR----YRGRPRSRSYS 191
Query: 670 PAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAK---YS-------RRSYSPGYEGA 521
PAPRRR DYSASP+R+ R +SP R P E D K YS RR GYE
Sbjct: 192 PAPRRRD-DYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPANKDGDRRDADNGYEKR 250
Query: 520 ATAAE 506
+ A+
Sbjct: 251 SPPAD 255
>gi|222622536|gb|EEE56668.1| hypothetical protein OsJ_06104 [Oryza sativa
Japonica Group]
Length = 304
Score = 246 bits (626), Expect = 9e-063
Identities = 145/245 (59%), Positives = 161/245 (65%), Gaps = 34/245 (13%)
Frame = -2
Query: 1189 YSPPRRGYGGRGRSPPPPPRRGYGGGG------GGGGRKGSSHGSLLVRNVPLDCRPEEL 1028
YSPP R PPRRGYGG G G GGRK GSLLVRN+PL CR E+L
Sbjct: 43 YSPPYRS----------PPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDL 92
Query: 1027 RVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVA 848
RVPFERFGPVRDVY+P+DYY+GEPRGFAFVEFVD YDA EAQ MNR+V GREITVV+A
Sbjct: 93 RVPFERFGPVRDVYLPKDYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLA 152
Query: 847 SESRKRPEEMRVKTRTRS-REPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYS 671
+ESRKRPEEMR + R R + G R +GRSRSR SRSRSPR R R RSRSYS
Sbjct: 153 AESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSR--SRSRSPR----YRGRPRSRSYS 206
Query: 670 PAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAK---YS-------RRSYSPGYEGA 521
PAPRRR DYSASP+R+ R +SP R P E D K YS RR GYE
Sbjct: 207 PAPRRRD-DYSASPQRKDTHRAKSPRRQPKEHEVDKKRRSYSPANKDGDRRDADNGYEKR 265
Query: 520 ATAAE 506
+ A+
Sbjct: 266 SPPAD 270
>gi|115445337|ref|NP_001046448.1| Os02g0252100 [Oryza sativa Japonica Group]
Length = 265
Score = 243 bits (619), Expect = 6e-062
Identities = 140/228 (61%), Positives = 156/228 (68%), Gaps = 24/228 (10%)
Frame = -2
Query: 1138 PPRRGYGGGG------GGGGRKGSSHGSLLVRNVPLDCRPEELRVPFERFGPVRDVYIPR 977
PPRRGYGG G G GGRK GSLLVRN+PL CR E+LRVPFERFGPVRDVY+P+
Sbjct: 11 PPRRGYGGRGRSPPRRGYGGRKEQGSGSLLVRNIPLSCRAEDLRVPFERFGPVRDVYLPK 70
Query: 976 DYYSGEPRGFAFVEFVDAYDAGEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTR 797
DYY+GEPRGFAFVEFVD YDA EAQ MNR+V GREITVV+A+ESRKRPEEMR + R R
Sbjct: 71 DYYTGEPRGFAFVEFVDPYDASEAQYHMNRQVVFGREITVVLAAESRKRPEEMRSRARVR 130
Query: 796 S-REPSGSRGRSHGRSRSRSISRSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRR 620
+ G R +GRSRSR SRSRSPR R R RSRSYSPAPRRR DYSASP+R+
Sbjct: 131 GYSDHEGRRSSHYGRSRSR--SRSRSPR----YRGRPRSRSYSPAPRRRD-DYSASPQRK 183
Query: 619 QEERPRSPLRSPPRGEGDAK---YS-------RRSYSPGYEGAATAAE 506
R +SP R P E D K YS RR GYE + A+
Sbjct: 184 DTHRAKSPRRQPKEHEVDKKRRSYSPANKDGDRRDADNGYEKRSPPAD 231
>gi|224112763|ref|XP_002316285.1| predicted protein [Populus trichocarpa]
Length = 232
Score = 237 bits (604), Expect = 3e-060
Identities = 123/188 (65%), Positives = 143/188 (76%), Gaps = 6/188 (3%)
Frame = -2
Query: 1093 KGSSHGSLLVRNVPLDCRPEELRVPFERFGPVRDVYIPRDYYSGEPRGFAFVEFVDAYDA 914
K + GSLLVRN+PLDCRP+ELR PFERFG VRDVYIP+DYY+GEPRGFAFV+FVD Y+A
Sbjct: 1 KDQNSGSLLVRNIPLDCRPDELRGPFERFGVVRDVYIPKDYYTGEPRGFAFVQFVDPYEA 60
Query: 913 GEAQRSMNRRVFGGREITVVVASESRKRPEEMRVKTRTRSREPSGSRGRSHGRSRSRSIS 734
EAQ MN ++F GR+I+VV+A+E+RKRPEEMR + R R G R ++GRSRSRS+
Sbjct: 61 MEAQHRMNGQIFAGRQISVVLAAETRKRPEEMRHRARVRGPSSHGGRSSNYGRSRSRSL- 119
Query: 733 RSRSPRRPSDSRSRRRSRSYSPAPRRRGADYSASPRRRQEERPRSPLRSPPRGEGDAKYS 554
SRSPR SRSR RSRSYSPAPRRR DYSASP RR P SP PP +GD +S
Sbjct: 120 -SRSPRHYPSSRSRYRSRSYSPAPRRR--DYSASPDRRHAGHPGSPRGPPPERDGD--HS 174
Query: 553 RRSYSPGY 530
RRSYSP Y
Sbjct: 175 RRSYSPAY 182
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,364,320,421,267
Number of Sequences: 15229318
Number of Extensions: 5364320421267
Number of Successful Extensions: 1243777444
Number of sequences better than 0.0: 0
|
