BLASTX 7.6.2
Query= UN50301 /QuerySize=988
(987 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0WTY4|VPS2B_ARATH Vacuolar protein sorting-associated protei... 327 1e-088
sp|Q941D5|VPS2C_ARATH Vacuolar protein sorting-associated protei... 228 5e-059
sp|Q9SKI2|VPS2A_ARATH Vacuolar protein sorting-associated protei... 147 1e-034
sp|Q6NXD2|CHM2B_DANRE Charged multivesicular body protein 2b OS=... 132 4e-030
sp|O43633|CHM2A_HUMAN Charged multivesicular body protein 2a OS=... 128 8e-029
sp|Q9DB34|CHM2A_MOUSE Charged multivesicular body protein 2a OS=... 128 8e-029
sp|Q7ZW25|CHM2A_DANRE Charged multivesicular body protein 2a OS=... 127 1e-028
sp|Q54DB1|CM2A2_DICDI Charged multivesicular body protein 2a hom... 127 1e-028
sp|Q66IV6|CH2BB_XENLA Charged multivesicular body protein 2b-B O... 127 2e-028
sp|Q6IP52|CHM2A_XENLA Charged multivesicular body protein 2a OS=... 127 2e-028
sp|Q7SYR0|CH2BA_XENLA Charged multivesicular body protein 2b-A O... 125 5e-028
sp|Q6DFS6|CHM2A_XENTR Charged multivesicular body protein 2a OS=... 125 5e-028
sp|Q6NVL7|CHM2B_XENTR Charged multivesicular body protein 2b OS=... 124 1e-027
sp|Q5F3A2|CHM2B_CHICK Charged multivesicular body protein 2b OS=... 123 3e-027
sp|Q9UQN3|CHM2B_HUMAN Charged multivesicular body protein 2b OS=... 121 8e-027
sp|Q5RAV2|CHM2B_PONAB Charged multivesicular body protein 2b OS=... 121 8e-027
sp|Q5ZHN1|CHM2A_CHICK Charged multivesicular body protein 2a OS=... 121 1e-026
sp|Q3SX42|CHM2B_BOVIN Charged multivesicular body protein 2b OS=... 121 1e-026
sp|Q8BJF9|CHM2B_MOUSE Charged multivesicular body protein 2b OS=... 120 2e-026
sp|P36108|DID4_YEAST DOA4-independent degradation protein 4 OS=S... 114 2e-024
>sp|Q0WTY4|VPS2B_ARATH Vacuolar protein sorting-associated protein 2 homolog 2
OS=Arabidopsis thaliana GN=VPS2.2 PE=2 SV=2
Length = 222
Score = 327 bits (836), Expect = 1e-088
Identities = 176/185 (95%), Positives = 181/185 (97%), Gaps = 1/185 (0%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
+EKRLVAEIKKTAKTGNEAATKILARQLVR RQQITNLQGSRAQIRGVTTHTQALYASTS
Sbjct: 38 EEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTS 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE
Sbjct: 98 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSN-SSESSEVDELEKRLA 845
ET+DLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPP +TA +N +SESSEVDELEKRLA
Sbjct: 158 ETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESSEVDELEKRLA 217
Query: 846 SLRRI 860
SLRRI
Sbjct: 218 SLRRI 222
>sp|Q941D5|VPS2C_ARATH Vacuolar protein sorting-associated protein 2 homolog 3
OS=Arabidopsis thaliana GN=VPS2.3 PE=2 SV=1
Length = 210
Score = 228 bits (581), Expect = 5e-059
Identities = 112/158 (70%), Positives = 139/158 (87%)
Frame = +3
Query: 297 SSHNQEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALY 476
S ++EK+LV EIK+TAK+GNE ATKILARQL+R RQQI NLQGSRAQ+RG+ THTQA++
Sbjct: 34 SLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMH 93
Query: 477 ASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKD 656
A TS+++GM+GATKAM AM+K M P KQAKV+++FQKQSAQ+DMT EMMS++ID+ LD D
Sbjct: 94 AHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDND 153
Query: 657 EAEEETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTA 770
EAE+ET+DLTNQVLDEIG+ +ASQLSSAPKG+I K A
Sbjct: 154 EAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKA 191
>sp|Q9SKI2|VPS2A_ARATH Vacuolar protein sorting-associated protein 2 homolog 1
OS=Arabidopsis thaliana GN=VPS2.1 PE=2 SV=2
Length = 225
Score = 147 bits (370), Expect = 1e-034
Identities = 76/186 (40%), Positives = 121/186 (65%), Gaps = 2/186 (1%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L+ EIKKTAK G A K++A+ L+R R QI ++Q++GV+ Q L ++ +
Sbjct: 40 QEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQA 99
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
+ MKG TKAM MN+QM K++++F++Q+ +++M E+M +AID+ L+ DE EE
Sbjct: 100 MGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEE 159
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE-SSEVD-ELEKRL 842
ET+DL +QVLDEIG+ + +L +AP G +A A A + +E S +D +L+ RL
Sbjct: 160 ETEDLVSQVLDEIGIDINQELVNAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARL 219
Query: 843 ASLRRI 860
+LR++
Sbjct: 220 DNLRKM 225
>sp|Q6NXD2|CHM2B_DANRE Charged multivesicular body protein 2b OS=Danio rerio
GN=chmp2b PE=2 SV=1
Length = 214
Score = 132 bits (331), Expect = 4e-030
Identities = 69/170 (40%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AKTGN A K+LA+QLV+ R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLEMEIKKMAKTGNRDACKVLAKQLVQVRKQKTRTYAVSSKVTSMSTQTKLMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M TK M A+NK+M P K + +++FQK++A++DMT EMM++ +DE + EE
Sbjct: 98 MAGAMATTTKTMQAVNKKMDPKKTMQTLQNFQKETAKMDMTEEMMNDTLDEIFEDSGDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSE 818
E+ D+ NQVLDEIG+ ++ +++ AP A KT + T A+ S E E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAHAPSA--ARKTPSAATAKADGISDEDIE 205
>sp|O43633|CHM2A_HUMAN Charged multivesicular body protein 2a OS=Homo sapiens
GN=CHMP2A PE=1 SV=1
Length = 222
Score = 128 bits (320), Expect = 8e-029
Identities = 69/183 (37%), Positives = 114/183 (62%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++A+IKK AK G A +I+A+ LVR R+ + RA I+ V+ Q L ++ S
Sbjct: 39 QEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F++Q+ +DM EMM++AID+ + +E EE
Sbjct: 99 MAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVDELEKRLAS 848
E+D + +QVLDE+G+ + +LS+ P + AA + S+ + +LE+RL +
Sbjct: 159 ESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEAAASALADADADLEERLKN 218
Query: 849 LRR 857
LRR
Sbjct: 219 LRR 221
>sp|Q9DB34|CHM2A_MOUSE Charged multivesicular body protein 2a OS=Mus musculus
GN=Chmp2a PE=1 SV=1
Length = 222
Score = 128 bits (320), Expect = 8e-029
Identities = 69/183 (37%), Positives = 114/183 (62%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++A+IKK AK G A +I+A+ LVR R+ + RA I+ V+ Q L ++ S
Sbjct: 39 QEKKIIADIKKMAKQGQMDAVRIMAKDLVRTRRYVRKFVLMRANIQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F++Q+ +DM EMM++AID+ + +E EE
Sbjct: 99 MAQAMKGVTKAMGTMNRQLKLPQIQKIMMEFERQAEIMDMKEEMMNDAIDDAMGDEEDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVDELEKRLAS 848
E+D + +QVLDE+G+ + +LS+ P + AA + S+ + +LE+RL +
Sbjct: 159 ESDAVVSQVLDELGLSLTDELSNLPSTGGSLSVAAGGKKAEATASALADADADLEERLKN 218
Query: 849 LRR 857
LRR
Sbjct: 219 LRR 221
>sp|Q7ZW25|CHM2A_DANRE Charged multivesicular body protein 2a OS=Danio rerio
GN=chmp2a PE=2 SV=1
Length = 220
Score = 127 bits (319), Expect = 1e-028
Identities = 72/187 (38%), Positives = 117/187 (62%), Gaps = 12/187 (6%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++A+IKK AK G A KI+A+ LVR R+ + RA I+ V+ Q L ++ S
Sbjct: 39 QEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F++QS +DM EMM++AID+ + ++ EE
Sbjct: 99 MAQAMKGVTKAMATMNRQLKLPQIQKIMMEFERQSEIMDMKEEMMNDAIDDAMGDEDDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPK-----GRIATKTAAPPTTTANSNSSESSEVDELE 833
E+D + +QVLDE+G+ ++ +LS+ P A K A P T A++++ +LE
Sbjct: 159 ESDAVVSQVLDELGLTLSDELSNLPATGGSLSVAAGKKAEPQPTLADADA-------DLE 211
Query: 834 KRLASLR 854
+RL +LR
Sbjct: 212 ERLNNLR 218
>sp|Q54DB1|CM2A2_DICDI Charged multivesicular body protein 2a homolog 2
OS=Dictyostelium discoideum GN=chmp2a2 PE=3 SV=1
Length = 198
Score = 127 bits (318), Expect = 1e-028
Identities = 60/146 (41%), Positives = 99/146 (67%)
Frame = +3
Query: 306 NQEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYAST 485
NQEK+++ +IKK AK G + KI+A+ LVR R I + Q++ V+ Q L ++
Sbjct: 37 NQEKKIILDIKKMAKQGQMNSAKIMAKDLVRTRYHIQKFYEMKTQLQAVSLRIQTLQSTQ 96
Query: 486 SISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAE 665
+++ MKG TKAM+ MN+QM + K++ +F++QS ++DM EMM++ +D+ +++D E
Sbjct: 97 AMAEAMKGVTKAMITMNRQMNLPQFTKIMMEFEQQSDKMDMKEEMMNDTMDQVMEQDGEE 156
Query: 666 EETDDLTNQVLDEIGVGVASQLSSAP 743
E++ ++ NQVLDEIG+ +ASQL AP
Sbjct: 157 EQSQEILNQVLDEIGIDLASQLVDAP 182
>sp|Q66IV6|CH2BB_XENLA Charged multivesicular body protein 2b-B OS=Xenopus
laevis GN=chmp2b-b PE=2 SV=1
Length = 214
Score = 127 bits (317), Expect = 2e-028
Identities = 62/172 (36%), Positives = 107/172 (62%), Gaps = 4/172 (2%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AKTGN+ A ++LA+QLV+ R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLEMEIKKMAKTGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D E EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTDEMINDTLDDIFDASEDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVD 824
E+ D+ NQVLDEIG+ ++ +++ AP + P T+ A S E++
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAP----SAAKGLPSTSAAKSKGISDEEIE 205
>sp|Q6IP52|CHM2A_XENLA Charged multivesicular body protein 2a OS=Xenopus laevis
GN=chmp2a PE=2 SV=1
Length = 220
Score = 127 bits (317), Expect = 2e-028
Identities = 71/184 (38%), Positives = 115/184 (62%), Gaps = 6/184 (3%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++A+IKK AK G A KI+A+ LVR R+ + RA I+ V+ Q L ++ S
Sbjct: 39 QEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F+KQS +DM EMM++AID+ + ++ EE
Sbjct: 99 MAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPK--GRIATKTAAPPTTTANSNSSESSEVDELEKRL 842
E+D + +QVLDE+G+ + +LS+ P G ++ A TA +++ +LE+RL
Sbjct: 159 ESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEATAALADADA----DLEERL 214
Query: 843 ASLR 854
+LR
Sbjct: 215 NNLR 218
>sp|Q7SYR0|CH2BA_XENLA Charged multivesicular body protein 2b-A OS=Xenopus
laevis GN=chmp2b-a PE=2 SV=1
Length = 214
Score = 125 bits (313), Expect = 5e-028
Identities = 63/177 (35%), Positives = 112/177 (63%), Gaps = 7/177 (3%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A K+LA+QLV+ R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLEMEIKKMAKAGNKDACKVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D E EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASEDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVDELEKR 839
E+ D+ NQVLDEIG+ ++ +++ AP +AA +A+++ S +E+E++
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAP-------SAAKGLPSASASKSTGISDEEIERQ 207
>sp|Q6DFS6|CHM2A_XENTR Charged multivesicular body protein 2a OS=Xenopus
tropicalis GN=chmp2a PE=2 SV=1
Length = 220
Score = 125 bits (313), Expect = 5e-028
Identities = 71/187 (37%), Positives = 116/187 (62%), Gaps = 12/187 (6%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++A+IKK AK G A KI+A+ LVR R+ + RA I+ V+ Q L ++ S
Sbjct: 39 QEKKIIADIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFIMMRANIQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F+KQS +DM EMM++AID+ + ++ EE
Sbjct: 99 MAQAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQSEIMDMKEEMMNDAIDDAMGDEDDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPK--GRIA---TKTAAPPTTTANSNSSESSEVDELE 833
E+D + +QVLDE+G+ + +LS+ P G ++ K P A++++ +LE
Sbjct: 159 ESDAVVSQVLDELGLTLTDELSNLPSTGGSLSVAGAKKGEPSAALADADA-------DLE 211
Query: 834 KRLASLR 854
+RL +LR
Sbjct: 212 ERLNNLR 218
>sp|Q6NVL7|CHM2B_XENTR Charged multivesicular body protein 2b OS=Xenopus
tropicalis GN=chmp2b PE=2 SV=1
Length = 214
Score = 124 bits (310), Expect = 1e-027
Identities = 63/177 (35%), Positives = 113/177 (63%), Gaps = 7/177 (3%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A ++LA+QLV+ R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLEMEIKKMAKAGNKDACRVLAKQLVQLRKQKTRTYAVSSKVTSMSTQTKVMSSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVDELEKR 839
E+ D+ NQVLDEIG+ ++ +++ AP + P+T+A+ +S S E E+E++
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAP-----SAAKGLPSTSASKSSGISDE--EIERQ 207
>sp|Q5F3A2|CHM2B_CHICK Charged multivesicular body protein 2b OS=Gallus gallus
GN=CHMP2B PE=2 SV=1
Length = 214
Score = 123 bits (307), Expect = 3e-027
Identities = 61/170 (35%), Positives = 108/170 (63%), Gaps = 2/170 (1%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QE++L EIKK AKTGN+ A K+LA+QLV+ R+Q +++ ++T T+ + +
Sbjct: 38 QERQLELEIKKMAKTGNKEACKVLAKQLVQLRKQKNRTYAVSSKVTSMSTQTKVMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDASDEEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSE 818
E+ D+ NQVLDEIG+ ++ +++ AP +A+ T+ A++ S E E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAPSAARGLPSAS--TSKASTISDEEIE 205
>sp|Q9UQN3|CHM2B_HUMAN Charged multivesicular body protein 2b OS=Homo sapiens
GN=CHMP2B PE=1 SV=1
Length = 213
Score = 121 bits (303), Expect = 8e-027
Identities = 59/167 (35%), Positives = 103/167 (61%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A K+LA+QLV R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE 809
E+ D+ NQVLDEIG+ ++ +++ AP + +A+ T + E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIE 204
>sp|Q5RAV2|CHM2B_PONAB Charged multivesicular body protein 2b OS=Pongo abelii
GN=CHMP2B PE=2 SV=1
Length = 213
Score = 121 bits (303), Expect = 8e-027
Identities = 59/167 (35%), Positives = 103/167 (61%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A K+LA+QLV R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLELEIKKMAKIGNKEACKVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE 809
E+ D+ NQVLDEIG+ ++ +++ AP + +A+ T + E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIE 204
>sp|Q5ZHN1|CHM2A_CHICK Charged multivesicular body protein 2a OS=Gallus gallus
GN=CHMP2A PE=2 SV=1
Length = 220
Score = 121 bits (302), Expect = 1e-026
Identities = 65/182 (35%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+++ +IKK AK G A KI+A+ LVR R+ + RA ++ V+ Q L ++ S
Sbjct: 39 QEKKIIIDIKKMAKQGQMDAVKIMAKDLVRTRRYVKKFITMRANVQAVSLKIQTLKSNNS 98
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ MKG TKAM MN+Q+ + K++ +F+KQ+ +DM E+M++AID+ + ++ EE
Sbjct: 99 MALAMKGVTKAMATMNRQLKLPQIQKIMMEFEKQAGIMDMKEELMNDAIDDAMGDEDDEE 158
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSESSEVDELEKRLAS 848
E+D + +QVLDE+G+ + +L++ P AA A + ++ + +LE+RL +
Sbjct: 159 ESDAVVSQVLDELGLNLTDELATLPPP--GGSLAAGEGRAAEAAAALADADADLEERLKN 216
Query: 849 LR 854
LR
Sbjct: 217 LR 218
>sp|Q3SX42|CHM2B_BOVIN Charged multivesicular body protein 2b OS=Bos taurus
GN=CHMP2B PE=2 SV=1
Length = 213
Score = 121 bits (301), Expect = 1e-026
Identities = 58/167 (34%), Positives = 104/167 (62%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A ++LA+QLV R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE 809
E+ D+ NQVLDEIG+ ++ +++ AP + +A+ +T + E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKSTISDEEIE 204
>sp|Q8BJF9|CHM2B_MOUSE Charged multivesicular body protein 2b OS=Mus musculus
GN=Chmp2b PE=2 SV=1
Length = 213
Score = 120 bits (300), Expect = 2e-026
Identities = 58/167 (34%), Positives = 103/167 (61%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L EIKK AK GN+ A ++LA+QLV R+Q T +++ ++T T+ + +
Sbjct: 38 QEKQLELEIKKMAKIGNKEACRVLAKQLVHLRKQKTRTFAVSSKVTSMSTQTKVMNSQMK 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
++ M K M A+NK+M P K + +++FQK++ +++MT EM+++ +D+ D + EE
Sbjct: 98 MAGAMSTTAKTMQAVNKKMDPQKTLQTMQNFQKENMKMEMTEEMINDTLDDIFDGSDDEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE 809
E+ D+ NQVLDEIG+ ++ +++ AP + +A+ T + E
Sbjct: 158 ESQDIVNQVLDEIGIEISGKMAKAPSAARSLPSASTSKATISDEEIE 204
>sp|P36108|DID4_YEAST DOA4-independent degradation protein 4 OS=Saccharomyces
cerevisiae GN=DID4 PE=1 SV=2
Length = 232
Score = 114 bits (283), Expect = 2e-024
Identities = 65/189 (34%), Positives = 106/189 (56%), Gaps = 6/189 (3%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
Q+K+LV+EIKK+AK G AA K+ A+ LVR R I +AQ++ ++ QA+ +S
Sbjct: 42 QDKKLVSEIKKSAKNGQVAAAKVQAKDLVRTRNYIQKFDNMKAQLQAISLRIQAVRSSDQ 101
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETL-DKDEAE 665
++ M AT + MN+ M + ++ +F+KQS + E M EAID + D+ + +
Sbjct: 102 MTRSMSEATGLLAGMNRTMNLPQLQRISMEFEKQSDLMGQRQEFMDEAIDNVMGDEVDED 161
Query: 666 EETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAP-----PTTTANSNSSESSEVDEL 830
EE D++ N+VLDEIGV + SQL S P+ ++ A P + + D+L
Sbjct: 162 EEADEIVNKVLDEIGVDLNSQLQSTPQNLVSNAPIAETAMGIPEPIGAGSEFHGNPDDDL 221
Query: 831 EKRLASLRR 857
+ RL +L++
Sbjct: 222 QARLNTLKK 230
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,161,879,332
Number of Sequences: 518415
Number of Extensions: 187161879332
Number of Successful Extensions: 1147171164
Number of sequences better than 0.0: 0
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