BLASTX 7.6.2
Query= UN50301 /QuerySize=988
(987 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:179... 327 8e-090
TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:179... 327 8e-090
TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR ... 228 4e-060
TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:258... 148 9e-036
TAIR9_protein||AT5G22950.1 | Symbols: VPS24.1 | VPS24.1 | chr5:7... 76 3e-014
>TAIR9_protein||AT5G44560.1 | Symbols: VPS2.2 | VPS2.2 | chr5:17946081-17948222
FORWARD
Length = 223
Score = 327 bits (837), Expect = 8e-090
Identities = 176/186 (94%), Positives = 181/186 (97%), Gaps = 1/186 (0%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
+EKRLVAEIKKTAKTGNEAATKILARQLVR RQQITNLQGSRAQIRGVTTHTQALYASTS
Sbjct: 38 EEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTS 97
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE
Sbjct: 98 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 157
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSN-SSESSEVDELEKRLA 845
ET+DLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPP +TA +N +SESSEVDELEKRLA
Sbjct: 158 ETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESSEVDELEKRLA 217
Query: 846 SLRRI* 863
SLRRI*
Sbjct: 218 SLRRI* 223
Score = 71 bits (172), Expect = 1e-012
Identities = 34/38 (89%), Positives = 38/38 (100%)
Frame = +3
Query: 126 MNIFRKKTTPKDALRTSKREMSVATRGIEREISSLQME 239
MNIF+KKTTPKDALRTSKREM+VATRGIEREI+SLQ+E
Sbjct: 1 MNIFKKKTTPKDALRTSKREMAVATRGIEREITSLQLE 38
>TAIR9_protein||AT5G44560.2 | Symbols: VPS2.2 | VPS2.2 | chr5:17946516-17948222
FORWARD
Length = 203
Score = 327 bits (837), Expect = 8e-090
Identities = 176/186 (94%), Positives = 181/186 (97%), Gaps = 1/186 (0%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
+EKRLVAEIKKTAKTGNEAATKILARQLVR RQQITNLQGSRAQIRGVTTHTQALYASTS
Sbjct: 18 EEKRLVAEIKKTAKTGNEAATKILARQLVRLRQQITNLQGSRAQIRGVTTHTQALYASTS 77
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE
Sbjct: 78 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 137
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSN-SSESSEVDELEKRLA 845
ET+DLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPP +TA +N +SESSEVDELEKRLA
Sbjct: 138 ETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNKNSESSEVDELEKRLA 197
Query: 846 SLRRI* 863
SLRRI*
Sbjct: 198 SLRRI* 203
>TAIR9_protein||AT1G03950.1 | Symbols: VPS2.3 | VPS2.3 (VACUOLAR PROTEIN
SORTING-ASSOCIATED PROTEIN 2.3) | chr1:1011388-1013212 REVERSE
Length = 211
Score = 228 bits (581), Expect = 4e-060
Identities = 112/158 (70%), Positives = 139/158 (87%)
Frame = +3
Query: 297 SSHNQEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALY 476
S ++EK+LV EIK+TAK+GNE ATKILARQL+R RQQI NLQGSRAQ+RG+ THTQA++
Sbjct: 34 SLQSEEKKLVLEIKRTAKSGNEGATKILARQLIRLRQQIANLQGSRAQMRGIATHTQAMH 93
Query: 477 ASTSISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKD 656
A TS+++GM+GATKAM AM+K M P KQAKV+++FQKQSAQ+DMT EMMS++ID+ LD D
Sbjct: 94 AHTSVAAGMQGATKAMAAMSKNMDPAKQAKVMREFQKQSAQMDMTTEMMSDSIDDALDND 153
Query: 657 EAEEETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTA 770
EAE+ET+DLTNQVLDEIG+ +ASQLSSAPKG+I K A
Sbjct: 154 EAEDETEDLTNQVLDEIGIDIASQLSSAPKGKIGGKKA 191
Score = 55 bits (131), Expect = 6e-008
Identities = 27/41 (65%), Positives = 31/41 (75%)
Frame = +3
Query: 126 MNIFRKKTTPKDALRTSKREMSVATRGIEREISSLQMEVNK 248
MNIF KK P++ LR SKREM+ ATRGIE+EI SLQ E K
Sbjct: 1 MNIFTKKPNPREVLRESKREMTQATRGIEKEIGSLQSEEKK 41
>TAIR9_protein||AT2G06530.1 | Symbols: VPS2.1 | VPS2.1 | chr2:2588740-2590285
REVERSE
Length = 226
Score = 148 bits (371), Expect = 9e-036
Identities = 76/187 (40%), Positives = 121/187 (64%), Gaps = 2/187 (1%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
QEK+L+ EIKKTAK G A K++A+ L+R R QI ++Q++GV+ Q L ++ +
Sbjct: 40 QEKKLINEIKKTAKQGQMGAVKVMAKDLIRTRHQIEKFYKLKSQLQGVSLRIQTLKSTQA 99
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
+ MKG TKAM MN+QM K++++F++Q+ +++M E+M +AID+ L+ DE EE
Sbjct: 100 MGEAMKGVTKAMGQMNRQMNLPSLQKIMQEFERQNEKMEMVSEVMGDAIDDALEGDEEEE 159
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNSSE-SSEVD-ELEKRL 842
ET+DL +QVLDEIG+ + +L +AP G +A A A + +E S +D +L+ RL
Sbjct: 160 ETEDLVSQVLDEIGIDINQELVNAPSGAVAVPAAKNKVVQAEATGAEDSGGIDSDLQARL 219
Query: 843 ASLRRI* 863
+LR++*
Sbjct: 220 DNLRKM* 226
>TAIR9_protein||AT5G22950.1 | Symbols: VPS24.1 | VPS24.1 | chr5:7681380-7682720
FORWARD
Length = 230
Score = 76 bits (185), Expect = 3e-014
Identities = 46/187 (24%), Positives = 91/187 (48%), Gaps = 5/187 (2%)
Frame = +3
Query: 309 QEKRLVAEIKKTAKTGNEAATKILARQLVRWRQQITNLQGSRAQIRGVTTHTQALYASTS 488
+E+ + IK+ AK + + K LA+++V R+ + L ++AQ+ ++ H A
Sbjct: 42 EERNVQKAIKEAAKRNDMVSAKALAKEIVSSRRTVNRLYENKAQMNSISMHLGESVAIAR 101
Query: 489 ISSGMKGATKAMVAMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSEAIDETLDKDEAEE 668
+ + + M +N M + A +++F K+ + + E ++EAID LD ++ EE
Sbjct: 102 TVGHLSKSAEVMKLVNNLMKAPQMAATMQEFSKEMTKAGVIEEFVNEAIDNALDSEDMEE 161
Query: 669 ETDDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPTTTANSNS-----SESSEVDELE 833
E D+ ++VL I A++L A + A +T+ + + E++E+
Sbjct: 162 EIDEEVDKVLTAIAGETAAELPVAVRKERIKVPAQKASTSREEEAVAEGVDDEEELEEIR 221
Query: 834 KRLASLR 854
RLA +R
Sbjct: 222 ARLAKVR 228
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,823,492,993
Number of Sequences: 33410
Number of Extensions: 23823492993
Number of Successful Extensions: 745539594
Number of sequences better than 0.0: 0
|
