BLASTX 7.6.2
Query= UN50309 /QuerySize=1204
(1203 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G41160.1 | Symbols: | ubiquitin-associated (U... 418 6e-117
TAIR9_protein||AT3G56740.1 | Symbols: | ubiquitin-associated (U... 390 1e-108
>TAIR9_protein||AT2G41160.1 | Symbols: | ubiquitin-associated (UBA)/TS-N
domain-containing protein | chr2:17156314-17158687 REVERSE
Length = 288
Score = 418 bits (1072), Expect = 6e-117
Identities = 210/250 (84%), Positives = 228/250 (91%)
Frame = -3
Query: 991 LTSSDIFEKFKIWKLIKSNFAFSSTPELFFGVYLLYYFRVFERQIGSNKHSVFILFSGFV 812
L+ DIFEKF+IWKLI S FAFSST +L G+YLLY+FRVFERQIGSNK+SVFI FSGFV
Sbjct: 39 LSYQDIFEKFRIWKLIISAFAFSSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFV 98
Query: 811 SLILQTIVLSLFKDPTANLLTSGPYALIFASFVPFYLDIPVTKRFNVFGAHFSDKSFIYL 632
SLIL+TI+LSL KDPTANLLTSGPYAL+FASFVPF+LDIPVTKRF V G HFSDKSFIYL
Sbjct: 99 SLILETILLSLTKDPTANLLTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYL 158
Query: 631 AGVQLLLSSWKRSMLPGICGIIAGSLYRLNIFGIRKAKIPEFIASFFSRMSLPSSSSHSQ 452
AGVQLLLSSWKRS+ GICGIIAGSLYRLNIFGIRKAK PEF+AS FSR SLPS SSHSQ
Sbjct: 159 AGVQLLLSSWKRSIFTGICGIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQ 218
Query: 451 APTRTSPSLGRQAVRSYQAPVPSSIEPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT 272
P RTSP+LGRQAVR+Y+AP+PS+ EPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT
Sbjct: 219 PPRRTSPNLGRQAVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT 278
Query: 271 NILLESHSH* 242
NILLE+HSH*
Sbjct: 279 NILLEAHSH* 288
Score = 67 bits (163), Expect = 2e-011
Identities = 34/42 (80%), Positives = 36/42 (85%), Gaps = 4/42 (9%)
Frame = -2
Query: 1103 MNGGPSGFNNAPVTRAFVITSALFTVFFGIRGGGGGGSYKLG 978
MNGGPSGFNNAPVT+AFVI +ALFTVFFGIR GGS KLG
Sbjct: 1 MNGGPSGFNNAPVTKAFVIATALFTVFFGIR----GGSSKLG 38
>TAIR9_protein||AT3G56740.1 | Symbols: | ubiquitin-associated (UBA)/TS-N
domain-containing protein | chr3:21015631-21017883 FORWARD
Length = 294
Score = 390 bits (1000), Expect = 1e-108
Identities = 200/256 (78%), Positives = 221/256 (86%), Gaps = 6/256 (2%)
Frame = -3
Query: 991 LTSSDIFEKFKIWKLIKSNFAFSSTPELFFGVYLLYYFRVFERQIGSNKHSVFILFSGFV 812
L+ DIFEKF+IWKLI S FAFSSTPEL FG+YLLYYFRVFERQIGSNK+SVFILFSG V
Sbjct: 39 LSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTV 98
Query: 811 SLILQTIVLSLFKDPTANLLTSGPYALIFASFVPFYLDIPVTKRFNVFGAHFSDKSFIYL 632
SL+L+ I+LSL KD TANLLTSGPY LIFASF+PFYLDIPV+ RF VFG +FSDKSFIYL
Sbjct: 99 SLLLEVILLSLLKDTTANLLTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYL 158
Query: 631 AGVQLLLSSWKRSMLPGICGIIAGSLYRLNIFGIRKAKIPEFIASFFSRMSLPS-SSSHS 455
AGVQLLLSSWKRS+ PGICGIIAGSLYRLNI GIRKAK PEF+ASFFSR+S PS +S
Sbjct: 159 AGVQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPP 218
Query: 454 QAPTRT-----SPSLGRQAVRSYQAPVPSSIEPSEEAIATLVSMGFDQNAARQALVHARN 290
AP+R SP+ GR+A RS AP+PSS+EPSEEAI TLVSMGFD+NAARQALVHARN
Sbjct: 219 PAPSRNIVGTISPNTGRRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARN 278
Query: 289 DVNAATNILLESHSH* 242
DVNAATNILLE+ SH*
Sbjct: 279 DVNAATNILLEAQSH* 294
Score = 64 bits (154), Expect = 2e-010
Identities = 29/32 (90%), Positives = 32/32 (100%)
Frame = -2
Query: 1103 MNGGPSGFNNAPVTRAFVITSALFTVFFGIRG 1008
MNGGPSGF+NAPVT+AFVITSALFTVFFGI+G
Sbjct: 1 MNGGPSGFHNAPVTKAFVITSALFTVFFGIQG 32
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,823,492,993
Number of Sequences: 33410
Number of Extensions: 23823492993
Number of Successful Extensions: 745539594
Number of sequences better than 0.0: 0
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