Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN50309


BLASTX 7.6.2

Query= UN50309 /QuerySize=1204
        (1203 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G41160.1 | Symbols:  | ubiquitin-associated (U...    418   6e-117
TAIR9_protein||AT3G56740.1 | Symbols:  | ubiquitin-associated (U...    390   1e-108

>TAIR9_protein||AT2G41160.1 | Symbols:  | ubiquitin-associated (UBA)/TS-N
        domain-containing protein | chr2:17156314-17158687 REVERSE

          Length = 288

 Score =  418 bits (1072), Expect = 6e-117
 Identities = 210/250 (84%), Positives = 228/250 (91%)
 Frame = -3

Query: 991 LTSSDIFEKFKIWKLIKSNFAFSSTPELFFGVYLLYYFRVFERQIGSNKHSVFILFSGFV 812
           L+  DIFEKF+IWKLI S FAFSST +L  G+YLLY+FRVFERQIGSNK+SVFI FSGFV
Sbjct:  39 LSYQDIFEKFRIWKLIISAFAFSSTTQLLSGLYLLYFFRVFERQIGSNKYSVFIFFSGFV 98

Query: 811 SLILQTIVLSLFKDPTANLLTSGPYALIFASFVPFYLDIPVTKRFNVFGAHFSDKSFIYL 632
           SLIL+TI+LSL KDPTANLLTSGPYAL+FASFVPF+LDIPVTKRF V G HFSDKSFIYL
Sbjct:  99 SLILETILLSLTKDPTANLLTSGPYALVFASFVPFFLDIPVTKRFGVLGVHFSDKSFIYL 158

Query: 631 AGVQLLLSSWKRSMLPGICGIIAGSLYRLNIFGIRKAKIPEFIASFFSRMSLPSSSSHSQ 452
           AGVQLLLSSWKRS+  GICGIIAGSLYRLNIFGIRKAK PEF+AS FSR SLPS SSHSQ
Sbjct: 159 AGVQLLLSSWKRSIFTGICGIIAGSLYRLNIFGIRKAKFPEFMASLFSRFSLPSLSSHSQ 218

Query: 451 APTRTSPSLGRQAVRSYQAPVPSSIEPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT 272
            P RTSP+LGRQAVR+Y+AP+PS+ EPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT
Sbjct: 219 PPRRTSPNLGRQAVRAYRAPMPSTTEPSEEAIATLVSMGFDQNAARQALVHARNDVNAAT 278

Query: 271 NILLESHSH* 242
           NILLE+HSH*
Sbjct: 279 NILLEAHSH* 288


 Score =  67 bits (163), Expect = 2e-011
 Identities = 34/42 (80%), Positives = 36/42 (85%), Gaps = 4/42 (9%)
 Frame = -2

Query: 1103 MNGGPSGFNNAPVTRAFVITSALFTVFFGIRGGGGGGSYKLG 978
            MNGGPSGFNNAPVT+AFVI +ALFTVFFGIR    GGS KLG
Sbjct:    1 MNGGPSGFNNAPVTKAFVIATALFTVFFGIR----GGSSKLG 38

>TAIR9_protein||AT3G56740.1 | Symbols:  | ubiquitin-associated (UBA)/TS-N
        domain-containing protein | chr3:21015631-21017883 FORWARD

          Length = 294

 Score =  390 bits (1000), Expect = 1e-108
 Identities = 200/256 (78%), Positives = 221/256 (86%), Gaps = 6/256 (2%)
 Frame = -3

Query: 991 LTSSDIFEKFKIWKLIKSNFAFSSTPELFFGVYLLYYFRVFERQIGSNKHSVFILFSGFV 812
           L+  DIFEKF+IWKLI S FAFSSTPEL FG+YLLYYFRVFERQIGSNK+SVFILFSG V
Sbjct:  39 LSYQDIFEKFRIWKLIMSTFAFSSTPELMFGLYLLYYFRVFERQIGSNKYSVFILFSGTV 98

Query: 811 SLILQTIVLSLFKDPTANLLTSGPYALIFASFVPFYLDIPVTKRFNVFGAHFSDKSFIYL 632
           SL+L+ I+LSL KD TANLLTSGPY LIFASF+PFYLDIPV+ RF VFG +FSDKSFIYL
Sbjct:  99 SLLLEVILLSLLKDTTANLLTSGPYGLIFASFIPFYLDIPVSTRFRVFGVNFSDKSFIYL 158

Query: 631 AGVQLLLSSWKRSMLPGICGIIAGSLYRLNIFGIRKAKIPEFIASFFSRMSLPS-SSSHS 455
           AGVQLLLSSWKRS+ PGICGIIAGSLYRLNI GIRKAK PEF+ASFFSR+S PS  +S  
Sbjct: 159 AGVQLLLSSWKRSIFPGICGIIAGSLYRLNILGIRKAKFPEFVASFFSRLSFPSFGNSPP 218

Query: 454 QAPTRT-----SPSLGRQAVRSYQAPVPSSIEPSEEAIATLVSMGFDQNAARQALVHARN 290
            AP+R      SP+ GR+A RS  AP+PSS+EPSEEAI TLVSMGFD+NAARQALVHARN
Sbjct: 219 PAPSRNIVGTISPNTGRRAERSQPAPLPSSVEPSEEAITTLVSMGFDRNAARQALVHARN 278

Query: 289 DVNAATNILLESHSH* 242
           DVNAATNILLE+ SH*
Sbjct: 279 DVNAATNILLEAQSH* 294


 Score =  64 bits (154), Expect = 2e-010
 Identities = 29/32 (90%), Positives = 32/32 (100%)
 Frame = -2

Query: 1103 MNGGPSGFNNAPVTRAFVITSALFTVFFGIRG 1008
            MNGGPSGF+NAPVT+AFVITSALFTVFFGI+G
Sbjct:    1 MNGGPSGFHNAPVTKAFVITSALFTVFFGIQG 32

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,823,492,993
Number of Sequences: 33410
Number of Extensions: 23823492993
Number of Successful Extensions: 745539594
Number of sequences better than 0.0: 0