BLASTX 7.6.2
Query= UN50402 /QuerySize=899
(898 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54210.1 | Symbols: | ribosomal protein L17 f... 382 3e-106
TAIR9_protein||AT5G09770.1 | Symbols: | ribosomal protein L17 f... 107 1e-023
TAIR9_protein||AT5G64650.1 | Symbols: | ribosomal protein L17 f... 105 6e-023
>TAIR9_protein||AT3G54210.1 | Symbols: | ribosomal protein L17 family protein |
chr3:20067672-20068385 REVERSE
Length = 212
Score = 382 bits (979), Expect = 3e-106
Identities = 193/213 (90%), Positives = 202/213 (94%), Gaps = 3/213 (1%)
Frame = +2
Query: 38 MAIP--MATATPTDSVSRVWSMSSLRSSLPSAVTCRLPSSSPRRPVTLRLPISTPTSLPS 211
MAIP MA ATPTDSVSRVWSMSSL+S+LPS + RLPSSS RRPVTLRLPIS+P SLPS
Sbjct: 1 MAIPMSMAMATPTDSVSRVWSMSSLKSALPSTASLRLPSSSSRRPVTLRLPISSP-SLPS 59
Query: 212 FSGLSPVNPLISTGLPGWKSFEDGFKIIDGGGRVYAMRHGRRVPKLNRPPDQRKALLRGL 391
FSGLSPVNPL+S GLP W+SFE+GFKI+DGGGR+YAMRHGRRVPKLNRPPDQRKALLRGL
Sbjct: 60 FSGLSPVNPLLSIGLPDWQSFENGFKIVDGGGRIYAMRHGRRVPKLNRPPDQRKALLRGL 119
Query: 392 TTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP 571
TTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP
Sbjct: 120 TTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALGYIYEKQIVHALFAEVP 179
Query: 572 DRYGERNGGYTRIIRTLPRRGDNAPMAYIELV* 670
DRYGERNGGYTRIIRTLPRRGDNAPMAYIELV*
Sbjct: 180 DRYGERNGGYTRIIRTLPRRGDNAPMAYIELV* 212
>TAIR9_protein||AT5G09770.1 | Symbols: | ribosomal protein L17 family protein |
chr5:3035267-3036518 REVERSE
Length = 161
Score = 107 bits (266), Expect = 1e-023
Identities = 51/108 (47%), Positives = 72/108 (66%)
Frame = +2
Query: 344 KLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALG 523
KL RP R ++LR + +QL+KH RI+TT +A +R+ D MI L K+GSL R+A G
Sbjct: 6 KLGRPAGHRMSMLRTMVSQLVKHERIETTVTKAKEVRRLADNMIQLGKEGSLSAARRAAG 65
Query: 524 YIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 667
++ ++H +F E+ RY +R GGYTR++RT R GD APMAYIE +
Sbjct: 66 FVRGDDVLHKIFTELAHRYKDRAGGYTRLLRTRIRVGDAAPMAYIEFI 113
>TAIR9_protein||AT5G64650.1 | Symbols: | ribosomal protein L17 family protein |
chr5:25839542-25840775 REVERSE
Length = 161
Score = 105 bits (260), Expect = 6e-023
Identities = 50/108 (46%), Positives = 72/108 (66%)
Frame = +2
Query: 344 KLNRPPDQRKALLRGLTTQLLKHGRIKTTRARASAMRKFVDKMITLAKDGSLHKRRQALG 523
KL RP R ++LR + +QL++H RI+TT +A +R+ D MI L K+GSL R+A G
Sbjct: 6 KLGRPAGHRMSMLRTMVSQLVQHERIETTVTKAKEVRRLADNMIQLGKEGSLAAARRAAG 65
Query: 524 YIYEKQIVHALFAEVPDRYGERNGGYTRIIRTLPRRGDNAPMAYIELV 667
++ ++H +F E+ RY +R GGYTR++RT R GD APMAYIE +
Sbjct: 66 FVRGDDVLHKIFTELAHRYKDRAGGYTRMLRTRIRVGDAAPMAYIEFI 113
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,912,720,294
Number of Sequences: 33410
Number of Extensions: 23912720294
Number of Successful Extensions: 750803576
Number of sequences better than 0.0: 0
|