BLASTX 7.6.2
Query= UN50450 /QuerySize=945
(944 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 375 8e-102
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 354 2e-095
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 354 2e-095
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 351 1e-094
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 351 1e-094
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 351 1e-094
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 349 4e-094
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 337 2e-090
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 329 7e-088
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 326 3e-087
gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vini... 326 4e-087
gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vini... 324 1e-086
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 322 5e-086
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 322 8e-086
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 320 2e-085
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 318 9e-085
gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 ... 314 2e-083
gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein... 314 2e-083
gi|224133740|ref|XP_002321649.1| predicted protein [Populus tric... 310 2e-082
gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Me... 310 3e-082
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 375 bits (961), Expect = 8e-102
Identities = 192/222 (86%), Positives = 202/222 (90%), Gaps = 5/222 (2%)
Frame = +3
Query: 102 EDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQAL 281
E+G SVAVEE++ + + EGDVSE G +F EP EEAKLFVGNLAYDVDSQAL
Sbjct: 89 EEGGEGSVAVEENE-DSFESQDAEGDVSE----GAEFPEPSEEAKLFVGNLAYDVDSQAL 143
Query: 282 AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKA 461
AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKA
Sbjct: 144 AMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKA 203
Query: 462 APKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRG 641
AP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQVFSEHGKVVEA+VVYDRETGRSRG
Sbjct: 204 APRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRG 263
Query: 642 FGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRRGF 767
FGFVTMSNE LNDA+AALDGQNMEGRAIRVNVAEERPRRGF
Sbjct: 264 FGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 305
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 354 bits (906), Expect = 2e-095
Identities = 183/229 (79%), Positives = 202/229 (88%), Gaps = 7/229 (3%)
Frame = +3
Query: 102 EDGSSSSVAVEESD-----PEEATFSEEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYD 263
E+G SVAVEE++ + + E EGDVSEG +F EP EEAKLFVGNLAYD
Sbjct: 86 EEGGEGSVAVEETENSLESQDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYD 145
Query: 264 VDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRL 443
V+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRL
Sbjct: 146 VNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRL 205
Query: 444 LTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRE 623
LTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRE
Sbjct: 206 LTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRE 265
Query: 624 TGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 767
TGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 266 TGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 314
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 354 bits (906), Expect = 2e-095
Identities = 183/229 (79%), Positives = 202/229 (88%), Gaps = 7/229 (3%)
Frame = +3
Query: 102 EDGSSSSVAVEESD-----PEEATFSEEEGDVSEGG-GGGGDFQEPPEEAKLFVGNLAYD 263
E+G SVAVEE++ + + E EGDVSEG +F EP EEAKLFVGNLAYD
Sbjct: 76 EEGGEGSVAVEETENSLESQDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYD 135
Query: 264 VDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRL 443
V+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRL
Sbjct: 136 VNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRL 195
Query: 444 LTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRE 623
LTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VVYDRE
Sbjct: 196 LTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRE 255
Query: 624 TGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 767
TGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 256 TGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 304
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 351 bits (899), Expect = 1e-094
Identities = 184/237 (77%), Positives = 201/237 (84%), Gaps = 10/237 (4%)
Frame = +3
Query: 87 LAMSEEDGSSSSVAVEESDPEEATFS--------EEEGDVSEGG-GGGGDFQEPPEEAKL 239
+A+ E + S S V E D E S E EGDVSEG +F EP EEAKL
Sbjct: 93 VAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKL 152
Query: 240 FVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFN 419
FVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFN
Sbjct: 153 FVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFN 212
Query: 420 RYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVE 599
RYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVE
Sbjct: 213 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 272
Query: 600 AKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 767
A+VVYDRETGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 273 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 351 bits (899), Expect = 1e-094
Identities = 184/237 (77%), Positives = 201/237 (84%), Gaps = 10/237 (4%)
Frame = +3
Query: 87 LAMSEEDGSSSSVAVEESDPEEATFS--------EEEGDVSEGG-GGGGDFQEPPEEAKL 239
+A+ E + S S V E D E S E EGDVSEG +F EP EEAKL
Sbjct: 79 VAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKL 138
Query: 240 FVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFN 419
FVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFN
Sbjct: 139 FVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFN 198
Query: 420 RYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVE 599
RYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVE
Sbjct: 199 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 258
Query: 600 AKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 767
A+VVYDRETGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 259 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 315
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 351 bits (899), Expect = 1e-094
Identities = 184/237 (77%), Positives = 201/237 (84%), Gaps = 10/237 (4%)
Frame = +3
Query: 87 LAMSEEDGSSSSVAVEESDPEEATFS--------EEEGDVSEGG-GGGGDFQEPPEEAKL 239
+A+ E + S S V E D E S E EGDVSEG +F EP EEAKL
Sbjct: 74 VAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKL 133
Query: 240 FVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFN 419
FVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFN
Sbjct: 134 FVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFN 193
Query: 420 RYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVE 599
RYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVE
Sbjct: 194 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 253
Query: 600 AKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 767
A+VVYDRETGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 254 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 310
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 349 bits (895), Expect = 4e-094
Identities = 182/234 (77%), Positives = 198/234 (84%), Gaps = 9/234 (3%)
Frame = +3
Query: 87 LAMSEEDGSSSSVAVEESDPEEATFS--------EEEGDVSEGG-GGGGDFQEPPEEAKL 239
+A+ E + S S V E D E S E EGDVSEG +F EP EEAKL
Sbjct: 93 VAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKL 152
Query: 240 FVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFN 419
FVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFN
Sbjct: 153 FVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFN 212
Query: 420 RYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVE 599
RYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVE
Sbjct: 213 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 272
Query: 600 AKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRR 761
A+VVYDRETGRSRGFGFVTMS+ LN+A++ALDGQN+EGRAIRVNVAEERP R
Sbjct: 273 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 337 bits (862), Expect = 2e-090
Identities = 170/221 (76%), Positives = 190/221 (85%), Gaps = 2/221 (0%)
Frame = +3
Query: 111 SSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 284
S +S EE + E+ + V E GG F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSDWPEEEEGEDGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 285 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 464
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEA+ AVEKFNRY++NGRLLTVN AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAA 190
Query: 465 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 644
P+GSRPERQPR Y+ AFR+YVGNLPWDVD+ RL+QVFSEHGKVV+A+VVYDRETGRSRGF
Sbjct: 191 PRGSRPERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGF 250
Query: 645 GFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRRGF 767
GFVTMSNE +NDA+AALDGQN+EGRAI+VNVAEERPRRGF
Sbjct: 251 GFVTMSNENEVNDAIAALDGQNLEGRAIKVNVAEERPRRGF 291
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 329 bits (841), Expect = 7e-088
Identities = 164/225 (72%), Positives = 190/225 (84%), Gaps = 7/225 (3%)
Frame = +3
Query: 93 MSEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDS 272
+S+ D S AV+ EEE +V EG F+EPPE+AK+FVGNL YDVDS
Sbjct: 102 VSDWDSEGESAAVDGQ-------GEEEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDS 154
Query: 273 QALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTV 452
Q LAMLFEQAGTVEIAEVIYNRETD SRGFGFV+MSTVEEAE AVE F+R+DL+GRLLTV
Sbjct: 155 QKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTV 214
Query: 453 NKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGR 632
NKAAP+GSRPER PRV+EP +R+YVGNLPWDVD+ RLEQ+FSEHGKVV+A+VVYDR+TGR
Sbjct: 215 NKAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGR 274
Query: 633 SRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRRGF 767
SRGFGFVTMS ET LNDA+AALDG++++GRAIRVNVAE+RPRR F
Sbjct: 275 SRGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRRNF 319
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 326 bits (835), Expect = 3e-087
Identities = 161/218 (73%), Positives = 181/218 (83%)
Frame = +3
Query: 111 SSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAML 290
S +E S EEA E D E G + EPPEEAKLFVGNL YD+DS+ LA L
Sbjct: 93 SEGGEEIEASGSEEAWEGEVGEDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQL 152
Query: 291 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPK 470
F++AG VEIAEVIYNRETDQSRGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+
Sbjct: 153 FDEAGVVEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPR 212
Query: 471 GSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGF 650
GSRPER P+ +EP+FR+YVGNLPW VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGF
Sbjct: 213 GSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGF 272
Query: 651 VTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRRG 764
VTMS+ET LNDA+AALDGQ+++GRAIRVNVAEERPRRG
Sbjct: 273 VTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRG 310
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 326 bits (834), Expect = 4e-087
Identities = 167/241 (69%), Positives = 197/241 (81%), Gaps = 7/241 (2%)
Frame = +3
Query: 51 MASSIVT--SSLRPLAMSEEDGSSSSVAVEESDPEEATFSEEEGDVSEG--GGGGGDFQE 218
++SS+VT + A EED ++V +EE E+ T+ EE +G G + E
Sbjct: 66 LSSSVVTFVAQTSDWAQQEED---NTVIIEEEQEEKVTWENEEAISDDGVVDDGEDSYSE 122
Query: 219 PPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAE 398
PPEEAK+FVGNL YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE
Sbjct: 123 PPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAE 182
Query: 399 TAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFS 578
AV+ F+RY+L+GRLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFS
Sbjct: 183 KAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFS 242
Query: 579 EHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPR 758
EHGKVVEA+VV+DRETGRSRGFGFVTMS++T L DA+AA DGQ ++GR IRVNVAEERPR
Sbjct: 243 EHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPR 302
Query: 759 R 761
R
Sbjct: 303 R 303
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 324 bits (830), Expect = 1e-086
Identities = 157/200 (78%), Positives = 176/200 (88%)
Frame = +3
Query: 165 EEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRET 344
EEE D E G + EPPEEAKLFVGNL YD+DS+ LA LF++AG VEIAEVIYNRET
Sbjct: 71 EEEKDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRET 130
Query: 345 DQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVY 524
DQSRGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+GSRPER P+ +EP+FR+Y
Sbjct: 131 DQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIY 190
Query: 525 VGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDG 704
VGNLPW VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGFVTMS+ET LNDA+AALDG
Sbjct: 191 VGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDG 250
Query: 705 QNMEGRAIRVNVAEERPRRG 764
Q+++GRAIRVNVAEERPRRG
Sbjct: 251 QSLDGRAIRVNVAEERPRRG 270
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 322 bits (825), Expect = 5e-086
Identities = 168/253 (66%), Positives = 193/253 (76%), Gaps = 5/253 (1%)
Frame = +3
Query: 18 SASFSSLTILA-----MASSIVTSSLRPLAMSEEDGSSSSVAVEESDPEEATFSEEEGDV 182
S S SLT L A S++ +S+ +G E+++ E GD
Sbjct: 45 SPSSRSLTTLVAQTSDWAQQEEDSNVAEATLSDWEGEGEGEGEEQTESGAEDGEESGGDG 104
Query: 183 SEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGF 362
GG + PPEEAKLFVGNL YDVD QALA LF+QAGTVE+AEVIYNRETDQSRGF
Sbjct: 105 FVEGGEEDSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGF 164
Query: 363 GFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPW 542
GFVTMSTVEEAE AVE FNRYD+NGRLLTVNKAAP+G+R +R PR +EPAFR+YVGNLPW
Sbjct: 165 GFVTMSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPW 224
Query: 543 DVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGR 722
VD RLEQVFSEHGKVVEA+VVYDRETGRSRGFGFVTMS +T L+DA+AALDGQ+++GR
Sbjct: 225 QVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGR 284
Query: 723 AIRVNVAEERPRR 761
AIRVNVAE+RPRR
Sbjct: 285 AIRVNVAEDRPRR 297
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 322 bits (823), Expect = 8e-086
Identities = 169/251 (67%), Positives = 199/251 (79%), Gaps = 3/251 (1%)
Frame = +3
Query: 9 FLLSASFSSLTILAMASSIVTSSLRPLAMSEEDGSSSSVAVEESDPEEATFSEEEGDVSE 188
F LS+ +LT+ + ++ SS +S+ + E+ + + +E SE
Sbjct: 42 FSLSSRPVNLTLSLKSKTLRNSSPVVTFVSQTSNWAEEEEGEDGSIGGTSVTVDESFESE 101
Query: 189 GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 368
G G F EPPEEAKLFVGNL YDVDSQALAMLFEQAGTVEI+EVIYNR+TDQSRGFGF
Sbjct: 102 DGVG---FPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGF 158
Query: 369 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDV 548
VTMSTVEEAE AVEKFN +++NGR LTVN+AAP+GSRPERQPRVY+ AFR+YVGNLPWDV
Sbjct: 159 VTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDV 218
Query: 549 DSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAI 728
DSGRLE++FSEHGKVV+A+VV DRETGRSRGFGFV MSNE +N A+AALDGQN+EGRAI
Sbjct: 219 DSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAI 278
Query: 729 RVNVAEERPRR 761
+VNVAEER RR
Sbjct: 279 KVNVAEERTRR 289
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 320 bits (820), Expect = 2e-085
Identities = 163/223 (73%), Positives = 183/223 (82%), Gaps = 1/223 (0%)
Frame = +3
Query: 99 EEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 278
E + V E++ E+A +E E G G F EPPEEAK+FVGNL YDVDS+
Sbjct: 106 ESNDFEGKVPEWEAEGEDAAATEAIRGEGESGDEEG-FVEPPEEAKIFVGNLPYDVDSEK 164
Query: 279 LAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNK 458
LAMLFEQAGTVEIAEVIYNRETD SRGFGFVTMSTVEE+E AVE +RYDL+GR LTVNK
Sbjct: 165 LAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVNK 224
Query: 459 AAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSR 638
AAP+GSRPER PRV EP +R+YVGNLPWDVDSGRLEQ+FSEHGKVV A+VV+DRET RSR
Sbjct: 225 AAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSR 284
Query: 639 GFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRRGF 767
GFGFVTMS E+ LNDA+AALDGQN++GR IRVNVAEERPRR F
Sbjct: 285 GFGFVTMSTESELNDAIAALDGQNLDGRPIRVNVAEERPRRTF 327
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 318 bits (814), Expect = 9e-085
Identities = 161/246 (65%), Positives = 196/246 (79%), Gaps = 4/246 (1%)
Frame = +3
Query: 33 SLTILAMASSIVTSSLRPLAMSEEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGD- 209
SL ++S++VT + SE D ++ +EE +E ++ E VS+ G G+
Sbjct: 47 SLQKQTLSSTVVTYVAQ---TSEWDQEGTNAVLEEGSDQEPSWGNTEAQVSDFGSDEGEG 103
Query: 210 FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVE 389
FQEPPE+AKLFVGNL +DVDS+ LA +FE AG VEIAEVIYNRETD+SRGFGFVTMSTVE
Sbjct: 104 FQEPPEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETDRSRGFGFVTMSTVE 163
Query: 390 EAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQ 569
EAE AVE ++++++NGR LTVNKAAP+GSRPER PR YEP+FRVYVGNLPWDVD RLEQ
Sbjct: 164 EAEKAVELYHKFEVNGRFLTVNKAAPRGSRPERAPREYEPSFRVYVGNLPWDVDDARLEQ 223
Query: 570 VFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEE 749
VFSEHGKV+ A+VV DRETGRSRGF FVTM++E+ +N+A+ ALDGQ +EGRAIRVNVAEE
Sbjct: 224 VFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIGALDGQTLEGRAIRVNVAEE 283
Query: 750 RPRRGF 767
RPRR F
Sbjct: 284 RPRRSF 289
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis
vinifera]
Length = 1122
Score = 314 bits (803), Expect = 2e-083
Identities = 159/221 (71%), Positives = 184/221 (83%), Gaps = 1/221 (0%)
Frame = +3
Query: 99 EEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 278
E +G + + ES+ E A +E D G + EPPEEAK+FVGNL YDVDS+
Sbjct: 900 EVEGPDAQASDWESEGEGAV-TEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSER 958
Query: 279 LAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNK 458
LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNK
Sbjct: 959 LARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNK 1018
Query: 459 AAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSR 638
AAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFSEHGKVVEA+VV+DRETGRSR
Sbjct: 1019 AAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSR 1078
Query: 639 GFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRR 761
GFGFVTMS++T L DA+AA DGQ ++GR IRVNVAEERPRR
Sbjct: 1079 GFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 1119
>gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 327
Score = 314 bits (803), Expect = 2e-083
Identities = 159/221 (71%), Positives = 184/221 (83%), Gaps = 1/221 (0%)
Frame = +3
Query: 99 EEDGSSSSVAVEESDPEEATFSEEEGDVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQA 278
E +G + + ES+ E A +E D G + EPPEEAK+FVGNL YDVDS+
Sbjct: 105 EVEGPDAQASDWESEGEGAV-TEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSER 163
Query: 279 LAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNK 458
LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNK
Sbjct: 164 LARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNK 223
Query: 459 AAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSR 638
AAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFSEHGKVVEA+VV+DRETGRSR
Sbjct: 224 AAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSR 283
Query: 639 GFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRR 761
GFGFVTMS++T L DA+AA DGQ ++GR IRVNVAEERPRR
Sbjct: 284 GFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 324
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 310 bits (793), Expect = 2e-082
Identities = 159/229 (69%), Positives = 188/229 (82%), Gaps = 5/229 (2%)
Frame = +3
Query: 90 AMSEEDGSSSSVAVE----ESDPEEATFSEEEGDVSEGGGGGGD-FQEPPEEAKLFVGNL 254
A EE+ +++ E E++ E+A SE E EG G + F EPPEEAK++VGNL
Sbjct: 64 AQQEEENNTTITLTEVSDWEAEGEDAAASETEAVRGEGERGDEEGFVEPPEEAKIYVGNL 123
Query: 255 AYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLN 434
YDV S+ LAMLF+QAGTVEI+EVIYN ETD SRGFGFVTMSTVEE++ A+E FNRY+L+
Sbjct: 124 PYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRGFGFVTMSTVEESDKAIEMFNRYNLD 183
Query: 435 GRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVY 614
GRLLTVNKAAP+GSRPER PRV EP++R+YVGNLPW VDSGRLE+VFSEHGKVV A+VV
Sbjct: 184 GRLLTVNKAAPRGSRPERPPRVSEPSYRIYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVS 243
Query: 615 DRETGRSRGFGFVTMSNETGLNDAVAALDGQNMEGRAIRVNVAEERPRR 761
D ETGRSRGFGFVTMS+E+ LNDA+AALDGQ ++GRAIRVNVA ERPRR
Sbjct: 244 DWETGRSRGFGFVTMSSESELNDAIAALDGQELDGRAIRVNVAAERPRR 292
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum
crystallinum]
Length = 306
Score = 310 bits (792), Expect = 3e-082
Identities = 161/257 (62%), Positives = 195/257 (75%), Gaps = 8/257 (3%)
Frame = +3
Query: 6 PFLLSASFSSLTILAMASSIVTSSLRPLAMSEEDGSSSSVAVE---ESDPEEATFSEEEG 176
PF S + ++ +A S S L E+ ++ + +S+P+ + E+
Sbjct: 55 PFSPQKSSTIVSYVAQTSDWDQESSNALLDDEQQVGGATWGTQNFGDSEPQVSGVGNEDE 114
Query: 177 DVSEGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSR 356
+ SE G F EPPEEAKLFVGNL YDVDS+ LA +F+ AG VEIAEVIYNRETD+SR
Sbjct: 115 EESEQG-----FSEPPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSR 169
Query: 357 GFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNL 536
GFGFVTMSTVEEAE AVE N +D+NGRLLTVNKAAP+GSRPER PR +EP+ RVYVGNL
Sbjct: 170 GFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCRVYVGNL 229
Query: 537 PWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETGLNDAVAALDGQNME 716
PWDVD+ RLEQVFSEHGKV+ A+VV DRETGRSRGFGFV+M++E+ +NDA+AALDGQ ++
Sbjct: 230 PWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLD 289
Query: 717 GRAIRVNVAEERPRRGF 767
GRAIRVNVAEERPRR F
Sbjct: 290 GRAIRVNVAEERPRRAF 306
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,156,835,029
Number of Sequences: 15229318
Number of Extensions: 5408156835029
Number of Successful Extensions: 1269931805
Number of sequences better than 0.0: 0
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