BLASTX 7.6.2
Query= UN50451 /QuerySize=1109
(1108 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 468 1e-129
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 401 1e-109
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 399 5e-109
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 356 7e-096
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 354 2e-095
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 354 2e-095
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 352 6e-095
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 340 3e-091
gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vini... 340 4e-091
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 336 4e-090
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 334 2e-089
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 333 5e-089
gi|224133740|ref|XP_002321649.1| predicted protein [Populus tric... 332 6e-089
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 330 4e-088
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 327 3e-087
gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Me... 326 6e-087
gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vini... 323 4e-086
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 323 5e-086
gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 ... 319 5e-085
gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein... 319 9e-085
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 468 bits (1202), Expect = 1e-129
Identities = 250/313 (79%), Positives = 269/313 (85%), Gaps = 20/313 (6%)
Frame = -1
Query: 1072 MASSIITSSLRPLAMSESSSSTIFSHPSV-STIHSSKTRC---SFFPKRTNLPLSF---- 917
MASSI+TSSL+PLAM++SSSSTIFSHPS+ STI SS+ RC S NLPLSF
Sbjct: 1 MASSIVTSSLKPLAMADSSSSTIFSHPSISSTISSSRIRCSNVSLLTGHINLPLSFSRFS 60
Query: 916 ----SLKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEEATFSEGEGDVSEG 749
SLK+KTHLKKSPFV+ VA+T DW+ E+G SVAVEE+E + + EGDVSE
Sbjct: 61 RFSLSLKSKTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEENE-DSFESQDAEGDVSE- 116
Query: 748 GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 569
G +F EP EEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF
Sbjct: 117 ----GAEFPEPSEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 172
Query: 568 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDV 389
VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDV
Sbjct: 173 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDV 232
Query: 388 DSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 209
D+GRLEQVFSEHGKVVEA+VVYDRETGRSRGFGFVTMSNE ELNDA+AALDGQNMEGRAI
Sbjct: 233 DNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDAIAALDGQNMEGRAI 292
Query: 208 RVNVAEERPRRGF 170
RVNVAEERPRRGF
Sbjct: 293 RVNVAEERPRRGF 305
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 401 bits (1029), Expect = 1e-109
Identities = 225/314 (71%), Positives = 248/314 (78%), Gaps = 14/314 (4%)
Frame = -1
Query: 1093 SLTILPLMASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNLPLSFS 914
SL L + SS T P S SSS I S SVS + F + +S S
Sbjct: 9 SLKPLAMADSSSSTIFSHPSISSTISSSRIRS-SSVSLLTGRINLPLSFSR-----VSLS 62
Query: 913 LKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEP--EEATFSEG---EGDVSEG 749
LKTKTHLKKSPFV+ VA+T DW+ E+G SVAVEE+E E SEG EGDVSEG
Sbjct: 63 LKTKTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEETENSLESQDVSEGDESEGDVSEG 120
Query: 748 GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 569
+F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF
Sbjct: 121 AVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 180
Query: 568 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDV 389
VTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDV
Sbjct: 181 VTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDV 240
Query: 388 DSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 209
D+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAI
Sbjct: 241 DNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAI 300
Query: 208 RVNVAEER-PRRGF 170
RVNVAEER PRRG+
Sbjct: 301 RVNVAEERPPRRGY 314
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 399 bits (1024), Expect = 5e-109
Identities = 208/258 (80%), Positives = 228/258 (88%), Gaps = 8/258 (3%)
Frame = -1
Query: 925 LSFSLKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEP--EEATFSEG---EGD 761
+S SLKTKTHLKKSPFV+ VA+T DW+ E+G SVAVEE+E E SEG EGD
Sbjct: 49 VSLSLKTKTHLKKSPFVSFVAQTSDWA--EEGGEGSVAVEETENSLESQDVSEGDESEGD 106
Query: 760 VSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSR 581
VSEG +F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSR
Sbjct: 107 VSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSR 166
Query: 580 GFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNL 401
GFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNL
Sbjct: 167 GFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNL 226
Query: 400 PWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNME 221
PWDVD+GRLEQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+E
Sbjct: 227 PWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLE 286
Query: 220 GRAIRVNVAEER-PRRGF 170
GRAIRVNVAEER PRRG+
Sbjct: 287 GRAIRVNVAEERPPRRGY 304
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 356 bits (911), Expect = 7e-096
Identities = 184/233 (78%), Positives = 200/233 (85%), Gaps = 9/233 (3%)
Frame = -1
Query: 841 EEDGSSSSVAVEESEPEEATFSEG--------EGDVSEGGGGGGGDFQEPPEEAKLFVGN 686
E + S S V E + E SEG EGDVSEG +F EP EEAKLFVGN
Sbjct: 78 ETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGN 137
Query: 685 LAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDL 506
LAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+V+EAETAVEKFNRYDL
Sbjct: 138 LAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDL 197
Query: 505 NGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVV 326
NGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRLEQ+FSEHGKVVEA+VV
Sbjct: 198 NGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVV 257
Query: 325 YDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEER-PRRGF 170
YDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 258 YDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 310
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 354 bits (907), Expect = 2e-095
Identities = 199/309 (64%), Positives = 229/309 (74%), Gaps = 10/309 (3%)
Frame = -1
Query: 1087 TILPLMASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNLPLSFSLK 908
+I ++SS I SS L + FS S+S + + S F +SF +
Sbjct: 28 SISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHLKKSPF-------VSFVAQ 80
Query: 907 TKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVE--ESEPEEATFSEGEGDVSEGGGGGG 734
T ++ ++ E + S E S E SE + + E EGDVSEG
Sbjct: 81 TSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSER 140
Query: 733 GDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMST 554
+F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+
Sbjct: 141 AEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 200
Query: 553 VEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRL 374
V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRL
Sbjct: 201 VDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRL 260
Query: 373 EQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVA 194
EQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAIRVNVA
Sbjct: 261 EQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
Query: 193 EER-PRRGF 170
EER PRRG+
Sbjct: 321 EERPPRRGY 329
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 354 bits (907), Expect = 2e-095
Identities = 199/309 (64%), Positives = 229/309 (74%), Gaps = 10/309 (3%)
Frame = -1
Query: 1087 TILPLMASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNLPLSFSLK 908
+I ++SS I SS L + FS S+S + + S F +SF +
Sbjct: 14 SISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHLKKSPF-------VSFVAQ 66
Query: 907 TKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVE--ESEPEEATFSEGEGDVSEGGGGGG 734
T ++ ++ E + S E S E SE + + E EGDVSEG
Sbjct: 67 TSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSER 126
Query: 733 GDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMST 554
+F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+
Sbjct: 127 AEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 186
Query: 553 VEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRL 374
V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRL
Sbjct: 187 VDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRL 246
Query: 373 EQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVA 194
EQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAIRVNVA
Sbjct: 247 EQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 306
Query: 193 EER-PRRGF 170
EER PRRG+
Sbjct: 307 EERPPRRGY 315
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 352 bits (903), Expect = 6e-095
Identities = 197/306 (64%), Positives = 226/306 (73%), Gaps = 9/306 (2%)
Frame = -1
Query: 1087 TILPLMASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNLPLSFSLK 908
+I ++SS I SS L + FS S+S + + S F +SF +
Sbjct: 28 SISSTISSSRIRSSSVSLLTGRINLPLSFSRVSLSLKTKTHLKKSPF-------VSFVAQ 80
Query: 907 TKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVE--ESEPEEATFSEGEGDVSEGGGGGG 734
T ++ ++ E + S E S E SE + + E EGDVSEG
Sbjct: 81 TSDWAEEGGEGSVAVEETENSLESQDVSEGDESEGDASEGDVSEGDESEGDVSEGAVSER 140
Query: 733 GDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMST 554
+F EP EEAKLFVGNLAYDV+SQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMS+
Sbjct: 141 AEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSS 200
Query: 553 VEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRL 374
V+EAETAVEKFNRYDLNGRLLTVNKAAP+GSRPER PRVYEPAFRVYVGNLPWDVD+GRL
Sbjct: 201 VDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRL 260
Query: 373 EQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVA 194
EQ+FSEHGKVVEA+VVYDRETGRSRGFGFVTMS+ ELN+A++ALDGQN+EGRAIRVNVA
Sbjct: 261 EQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVA 320
Query: 193 EERPRR 176
EERP R
Sbjct: 321 EERPPR 326
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 340 bits (871), Expect = 3e-091
Identities = 172/221 (77%), Positives = 191/221 (86%), Gaps = 1/221 (0%)
Frame = -1
Query: 829 SSSSVAVEESEPEEATFSEGEGDVSEG-GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 653
S +S EE E E+ + V E GG F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSDWPEEEEGEDGSIGGTSVTVDESFDTEDGGKFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 652 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 473
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEA+ AVEKFNRY++NGRLLTVN AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAA 190
Query: 472 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 293
P+GSRPERQPR Y+ AFR+YVGNLPWDVD+ RL+QVFSEHGKVV+A+VVYDRETGRSRGF
Sbjct: 191 PRGSRPERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSRGF 250
Query: 292 GFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEERPRRGF 170
GFVTMSNE E+NDA+AALDGQN+EGRAI+VNVAEERPRRGF
Sbjct: 251 GFVTMSNENEVNDAIAALDGQNLEGRAIKVNVAEERPRRGF 291
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 340 bits (870), Expect = 4e-091
Identities = 175/251 (69%), Positives = 208/251 (82%), Gaps = 7/251 (2%)
Frame = -1
Query: 922 SFSLKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEEATFSEGEGDVSEGG- 746
S LK+KT S VT VA+T DW+ +E+ ++V +EE + E+ T+ E E +S+ G
Sbjct: 58 SLFLKSKT--LSSSVVTFVAQTSDWAQQEE--DNTVIIEEEQEEKVTW-ENEEAISDDGV 112
Query: 745 -GGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGF 569
G + EPPEEAK+FVGNL YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGF
Sbjct: 113 VDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGF 172
Query: 568 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDV 389
V+MSTVEEAE AV+ F+RY+L+GRLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDV
Sbjct: 173 VSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDV 232
Query: 388 DSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAI 209
DS RLEQVFSEHGKVVEA+VV+DRETGRSRGFGFVTMS++TEL DA+AA DGQ ++GR I
Sbjct: 233 DSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTI 292
Query: 208 RVNVAEERPRR 176
RVNVAEERPRR
Sbjct: 293 RVNVAEERPRR 303
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 336 bits (861), Expect = 4e-090
Identities = 187/320 (58%), Positives = 231/320 (72%), Gaps = 18/320 (5%)
Frame = -1
Query: 1108 DSLLLSLTILPLMASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNL 929
DS LLSL SI TS L++S S I H + S S K++ F + +
Sbjct: 11 DSCLLSL-------PSIFTSKPPYLSLSVPSRPPIKLHITQS-YSSLKSKTHF---SSLV 59
Query: 928 PLSFSLKTKTHLKKSPFVTLVAET---PDWSGEEDGSSSSVAVEESEPE-EATFSEGEGD 761
PL +++ +AE+ +W G+E + + V + + E E+ +G+G+
Sbjct: 60 PLVAQTSDWAQQEENDATVTLAESEQEQEWEGQESETETEARVSDWDSEGESAAVDGQGE 119
Query: 760 VSE---GGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETD 590
E G F+EPPE+AK+FVGNL YDVDSQ LAMLFEQAGTVEIAEVIYNRETD
Sbjct: 120 EEEEVFEGSEPEEAFEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYNRETD 179
Query: 589 QSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYV 410
SRGFGFV+MSTVEEAE AVE F+R+DL+GRLLTVNKAAP+GSRPER PRV+EP +R+YV
Sbjct: 180 TSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGYRIYV 239
Query: 409 GNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQ 230
GNLPWDVD+ RLEQ+FSEHGKVV+A+VVYDR+TGRSRGFGFVTMS ETELNDA+AALDG+
Sbjct: 240 GNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAALDGR 299
Query: 229 NMEGRAIRVNVAEERPRRGF 170
+++GRAIRVNVAE+RPRR F
Sbjct: 300 SLDGRAIRVNVAEQRPRRNF 319
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 334 bits (856), Expect = 2e-089
Identities = 175/254 (68%), Positives = 200/254 (78%), Gaps = 6/254 (2%)
Frame = -1
Query: 916 SLKTKTH-LKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEEATFSE--GEGDVSEGG 746
SLKTKT PFV ++ EE+ + E E EA+ SE EG+V E G
Sbjct: 57 SLKTKTSPTTLVPFVAQTSDWAQQEEEEEKGGLTWDSEGGEEIEASGSEEAWEGEVGEDG 116
Query: 745 ---GGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGF 575
G + EPPEEAKLFVGNL YD+DS+ LA LF++AG VEIAEVIYNRETDQSRGF
Sbjct: 117 EESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSRGF 176
Query: 574 GFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPW 395
GF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+GSRPER P+ +EP+FR+YVGNLPW
Sbjct: 177 GFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNLPW 236
Query: 394 DVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGR 215
VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGFVTMS+ETELNDA+AALDGQ+++GR
Sbjct: 237 QVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLDGR 296
Query: 214 AIRVNVAEERPRRG 173
AIRVNVAEERPRRG
Sbjct: 297 AIRVNVAEERPRRG 310
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 333 bits (852), Expect = 5e-089
Identities = 169/266 (63%), Positives = 203/266 (76%), Gaps = 12/266 (4%)
Frame = -1
Query: 943 KRTNLPLSFSLKT--------KTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEE 788
K T +PLS SL + + S VT VA+T +W D ++ +EE +E
Sbjct: 28 KPTKIPLSLSLSSPQLSSFSLQKQTLSSTVVTYVAQTSEW----DQEGTNAVLEEGSDQE 83
Query: 787 ATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVI 608
++ E VS+ G G FQEPPE+AKLFVGNL +DVDS+ LA +FE AG VEIAEVI
Sbjct: 84 PSWGNTEAQVSDFGSDEGEGFQEPPEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVI 143
Query: 607 YNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEP 428
YNRETD+SRGFGFVTMSTVEEAE AVE ++++++NGR LTVNKAAP+GSRPER PR YEP
Sbjct: 144 YNRETDRSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVNKAAPRGSRPERAPREYEP 203
Query: 427 AFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAV 248
+FRVYVGNLPWDVD RLEQVFSEHGKV+ A+VV DRETGRSRGF FVTM++E+E+N+A+
Sbjct: 204 SFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAI 263
Query: 247 AALDGQNMEGRAIRVNVAEERPRRGF 170
ALDGQ +EGRAIRVNVAEERPRR F
Sbjct: 264 GALDGQTLEGRAIRVNVAEERPRRSF 289
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 332 bits (851), Expect = 6e-089
Identities = 170/254 (66%), Positives = 206/254 (81%), Gaps = 7/254 (2%)
Frame = -1
Query: 922 SFSLKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVE-----ESEPEEATFSEGEGDV 758
+ S+K KTHL S + VA+T DW+ +E+ +++++ + E+E E+A SE E
Sbjct: 41 TLSVKPKTHL--SLTIPFVAQTSDWAQQEEENNTTITLTEVSDWEAEGEDAAASETEAVR 98
Query: 757 SEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRG 578
EG G F EPPEEAK++VGNL YDV S+ LAMLF+QAGTVEI+EVIYN ETD SRG
Sbjct: 99 GEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNTETDTSRG 158
Query: 577 FGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLP 398
FGFVTMSTVEE++ A+E FNRY+L+GRLLTVNKAAP+GSRPER PRV EP++R+YVGNLP
Sbjct: 159 FGFVTMSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPERPPRVSEPSYRIYVGNLP 218
Query: 397 WDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEG 218
W VDSGRLE+VFSEHGKVV A+VV D ETGRSRGFGFVTMS+E+ELNDA+AALDGQ ++G
Sbjct: 219 WGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAALDGQELDG 278
Query: 217 RAIRVNVAEERPRR 176
RAIRVNVA ERPRR
Sbjct: 279 RAIRVNVAAERPRR 292
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 330 bits (844), Expect = 4e-088
Identities = 168/230 (73%), Positives = 188/230 (81%), Gaps = 5/230 (2%)
Frame = -1
Query: 865 AETPDWSGEEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGN 686
A DW GE +G ES E+ S G+G V GG + PPEEAKLFVGN
Sbjct: 73 ATLSDWEGEGEGEGEEQT--ESGAEDGEESGGDGFVE---GGEEDSYPLPPEEAKLFVGN 127
Query: 685 LAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDL 506
L YDVD QALA LF+QAGTVE+AEVIYNRETDQSRGFGFVTMSTVEEAE AVE FNRYD+
Sbjct: 128 LPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSRGFGFVTMSTVEEAEKAVEMFNRYDI 187
Query: 505 NGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVV 326
NGRLLTVNKAAP+G+R +R PR +EPAFR+YVGNLPW VD RLEQVFSEHGKVVEA+VV
Sbjct: 188 NGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVV 247
Query: 325 YDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEERPRR 176
YDRETGRSRGFGFVTMS +TEL+DA+AALDGQ+++GRAIRVNVAE+RPRR
Sbjct: 248 YDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRR 297
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 327 bits (836), Expect = 3e-087
Identities = 167/229 (72%), Positives = 186/229 (81%), Gaps = 3/229 (1%)
Frame = -1
Query: 853 DWSGEEDGSSSSVAVE-ESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAY 677
+W EE E E+E E+A +E EG G F EPPEEAK+FVGNL Y
Sbjct: 101 NWVNEESNDFEGKVPEWEAEGEDAAATEAIR--GEGESGDEEGFVEPPEEAKIFVGNLPY 158
Query: 676 DVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGR 497
DVDS+ LAMLFEQAGTVEIAEVIYNRETD SRGFGFVTMSTVEE+E AVE +RYDL+GR
Sbjct: 159 DVDSEKLAMLFEQAGTVEIAEVIYNRETDTSRGFGFVTMSTVEESEKAVEMLHRYDLDGR 218
Query: 496 LLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDR 317
LTVNKAAP+GSRPER PRV EP +R+YVGNLPWDVDSGRLEQ+FSEHGKVV A+VV+DR
Sbjct: 219 FLTVNKAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDR 278
Query: 316 ETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEERPRRGF 170
ET RSRGFGFVTMS E+ELNDA+AALDGQN++GR IRVNVAEERPRR F
Sbjct: 279 ETNRSRGFGFVTMSTESELNDAIAALDGQNLDGRPIRVNVAEERPRRTF 327
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum
crystallinum]
Length = 306
Score = 326 bits (834), Expect = 6e-087
Identities = 174/307 (56%), Positives = 213/307 (69%), Gaps = 7/307 (2%)
Frame = -1
Query: 1072 MASSIITSSLRPLAMSESSSSTIFSHPSVSTIHSSKTRCSFFPKRTNLPLSFSLKTKTHL 893
M+S+ L+ L++S + +T PS+ S P + NL +S +
Sbjct: 1 MSSATANPCLKTLSLSHNCFTTSLYTPSIFNPKSHNFSIPLKPTKLNLSISV-FSPFSPQ 59
Query: 892 KKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEEATFSEGEGDVSEGGGGGGGD----- 728
K S V+ VA+T DW E + + T + G+ + G G +
Sbjct: 60 KSSTIVSYVAQTSDWDQESSNALLDDEQQVGGATWGTQNFGDSEPQVSGVGNEDEEESEQ 119
Query: 727 -FQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTV 551
F EPPEEAKLFVGNL YDVDS+ LA +F+ AG VEIAEVIYNRETD+SRGFGFVTMSTV
Sbjct: 120 GFSEPPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNRETDRSRGFGFVTMSTV 179
Query: 550 EEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLE 371
EEAE AVE N +D+NGRLLTVNKAAP+GSRPER PR +EP+ RVYVGNLPWDVD+ RLE
Sbjct: 180 EEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCRVYVGNLPWDVDNARLE 239
Query: 370 QVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVAE 191
QVFSEHGKV+ A+VV DRETGRSRGFGFV+M++E+E+NDA+AALDGQ ++GRAIRVNVAE
Sbjct: 240 QVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAE 299
Query: 190 ERPRRGF 170
ERPRR F
Sbjct: 300 ERPRRAF 306
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 323 bits (827), Expect = 4e-086
Identities = 159/212 (75%), Positives = 180/212 (84%), Gaps = 10/212 (4%)
Frame = -1
Query: 808 EESEPEEATFSEGEGDVSEGGGGGGGDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGT 629
EE E ++ SEG D + EPPEEAKLFVGNL YD+DS+ LA LF++AG
Sbjct: 69 EEEEEKDGEESEGSEDT----------YSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGV 118
Query: 628 VEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPER 449
VEIAEVIYNRETDQSRGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAP+GSRPER
Sbjct: 119 VEIAEVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPER 178
Query: 448 QPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNE 269
P+ +EP+FR+YVGNLPW VD RLEQVFSEHGKVV+A+VVYDR+T RSRGFGFVTMS+E
Sbjct: 179 PPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSE 238
Query: 268 TELNDAVAALDGQNMEGRAIRVNVAEERPRRG 173
TELNDA+AALDGQ+++GRAIRVNVAEERPRRG
Sbjct: 239 TELNDAIAALDGQSLDGRAIRVNVAEERPRRG 270
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 323 bits (826), Expect = 5e-086
Identities = 165/219 (75%), Positives = 185/219 (84%), Gaps = 1/219 (0%)
Frame = -1
Query: 829 SSSSVAVEESEPEEATFSEGEGDVSEG-GGGGGGDFQEPPEEAKLFVGNLAYDVDSQALA 653
S +S EE E E+ + V E G F EPPEEAKLFVGNL YDVDSQALA
Sbjct: 71 SQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQALA 130
Query: 652 MLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAA 473
MLFEQAGTVEI+EVIYNR+TDQSRGFGFVTMSTVEEAE AVEKFN +++NGR LTVN+AA
Sbjct: 131 MLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRAA 190
Query: 472 PKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGF 293
P+GSRPERQPRVY+ AFR+YVGNLPWDVDSGRLE++FSEHGKVV+A+VV DRETGRSRGF
Sbjct: 191 PRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGF 250
Query: 292 GFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEERPRR 176
GFV MSNE E+N A+AALDGQN+EGRAI+VNVAEER RR
Sbjct: 251 GFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis
vinifera]
Length = 1122
Score = 319 bits (817), Expect = 5e-085
Identities = 168/260 (64%), Positives = 202/260 (77%), Gaps = 10/260 (3%)
Frame = -1
Query: 934 NLPLSFSLKTKTHLKKSPFVTLVAETPDWSGEEDGSSSSVAVEESEPEEATF-SEGEGDV 758
N ++F +T ++ T++ E EE + + VE + + + + SEGEG V
Sbjct: 863 NAEVTFVAQTSDWAQQEEDNTVIIEEEQ---EEKVTWENEEVEGPDAQASDWESEGEGAV 919
Query: 757 SEGGGGGG------GDFQEPPEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEVIYNRE 596
+E G + EPPEEAK+FVGNL YDVDS+ LA LFEQAG VEIAEVIYNRE
Sbjct: 920 TEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRE 979
Query: 595 TDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPKGSRPERQPRVYEPAFRV 416
TD+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNKAAP+GS+PER PRV+EPAFR+
Sbjct: 980 TDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRM 1039
Query: 415 YVGNLPWDVDSGRLEQVFSEHGKVVEAKVVYDRETGRSRGFGFVTMSNETELNDAVAALD 236
YVGNLPWDVDS RLEQVFSEHGKVVEA+VV+DRETGRSRGFGFVTMS++TEL DA+AA D
Sbjct: 1040 YVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATD 1099
Query: 235 GQNMEGRAIRVNVAEERPRR 176
GQ ++GR IRVNVAEERPRR
Sbjct: 1100 GQTLDGRTIRVNVAEERPRR 1119
>gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 327
Score = 319 bits (815), Expect = 9e-085
Identities = 164/232 (70%), Positives = 189/232 (81%), Gaps = 7/232 (3%)
Frame = -1
Query: 862 ETPDWSGEE-DGSSSSVAVEESEPEEATFSEGEGDVSEGG--GGGGGDFQEPPEEAKLFV 692
E W EE +G + + ESE E A +S+ G G + EPPEEAK+FV
Sbjct: 97 EKVTWENEEVEGPDAQASDWESEGEGAVTEA----ISDDGVVDDGEDSYSEPPEEAKVFV 152
Query: 691 GNLAYDVDSQALAMLFEQAGTVEIAEVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRY 512
GNL YDVDS+ LA LFEQAG VEIAEVIYNRETD+SRGFGFV+MSTVEEAE AV+ F+RY
Sbjct: 153 GNLPYDVDSERLARLFEQAGVVEIAEVIYNRETDRSRGFGFVSMSTVEEAEKAVDMFHRY 212
Query: 511 DLNGRLLTVNKAAPKGSRPERQPRVYEPAFRVYVGNLPWDVDSGRLEQVFSEHGKVVEAK 332
+L+GRLLTVNKAAP+GS+PER PRV+EPAFR+YVGNLPWDVDS RLEQVFSEHGKVVEA+
Sbjct: 213 ELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEAR 272
Query: 331 VVYDRETGRSRGFGFVTMSNETELNDAVAALDGQNMEGRAIRVNVAEERPRR 176
VV+DRETGRSRGFGFVTMS++TEL DA+AA DGQ ++GR IRVNVAEERPRR
Sbjct: 273 VVFDRETGRSRGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 324
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,156,835,029
Number of Sequences: 15229318
Number of Extensions: 5408156835029
Number of Successful Extensions: 1269931805
Number of sequences better than 0.0: 0
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