BLASTX 7.6.2
Query= UN50454 /QuerySize=448
(447 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 208 3e-052
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 194 3e-048
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 192 1e-047
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 192 1e-047
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 192 1e-047
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 192 1e-047
gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thal... 192 1e-047
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 192 1e-047
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 190 4e-047
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 188 2e-046
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 184 4e-045
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 183 7e-045
gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vini... 183 7e-045
gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 ... 181 2e-044
gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein... 181 2e-044
gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vini... 181 2e-044
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 179 1e-043
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 179 1e-043
gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Me... 179 1e-043
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 178 3e-043
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 208 bits (527), Expect = 3e-052
Identities = 101/104 (97%), Positives = 102/104 (98%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS
Sbjct: 202 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 261
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
RGFGFVTMSNE ELNDAIAALDGQNMEGRAIRVNVAEERPRRGF
Sbjct: 262 RGFGFVTMSNENELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 305
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 194 bits (492), Expect = 3e-048
Identities = 92/103 (89%), Positives = 99/103 (96%)
Frame = +1
Query: 4 AAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSR 183
AAPRGSRPERQPR Y+ AFR+YVGNLPWDVDN RL+QVFSEHGKVV+ARVVYDRETGRSR
Sbjct: 189 AAPRGSRPERQPRQYDAAFRIYVGNLPWDVDNDRLQQVFSEHGKVVDARVVYDRETGRSR 248
Query: 184 GFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
GFGFVTMSNE E+NDAIAALDGQN+EGRAI+VNVAEERPRRGF
Sbjct: 249 GFGFVTMSNENEVNDAIAALDGQNLEGRAIKVNVAEERPRRGF 291
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 210 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 269
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 270 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 314
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 200 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 259
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 260 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 304
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 225 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 284
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 285 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 211 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 270
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 271 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 315
>gi|475720|gb|AAA18380.1| RNA-binding protein 3 [Arabidopsis thaliana]
Length = 162
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 58 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 117
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 118 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 162
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 192 bits (486), Expect = 1e-047
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 206 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 265
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 266 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 310
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 190 bits (482), Expect = 4e-047
Identities = 92/102 (90%), Positives = 98/102 (96%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 225 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 284
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEERP R
Sbjct: 285 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPR 326
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 188 bits (477), Expect = 2e-046
Identities = 87/104 (83%), Positives = 99/104 (95%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRV+EP +R+YVGNLPWDVDN RLEQ+FSEHGKVV+ARVVYDR+TGRS
Sbjct: 216 KAAPRGSRPERPPRVFEPGYRIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRS 275
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
RGFGFVTMS ETELNDAIAALDG++++GRAIRVNVAE+RPRR F
Sbjct: 276 RGFGFVTMSTETELNDAIAALDGRSLDGRAIRVNVAEQRPRRNF 319
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 184 bits (465), Expect = 4e-045
Identities = 87/104 (83%), Positives = 96/104 (92%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRV EP +R+YVGNLPWDVD+GRLEQ+FSEHGKVV ARVV+DRET RS
Sbjct: 224 KAAPRGSRPERPPRVSEPGYRIYVGNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRS 283
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
RGFGFVTMS E+ELNDAIAALDGQN++GR IRVNVAEERPRR F
Sbjct: 284 RGFGFVTMSTESELNDAIAALDGQNLDGRPIRVNVAEERPRRTF 327
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 183 bits (463), Expect = 7e-045
Identities = 86/103 (83%), Positives = 98/103 (95%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER P+ +EP+FR+YVGNLPW VD+ RLEQVFSEHGKVV+ARVVYDR+T RS
Sbjct: 208 KAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRS 267
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRG 309
RGFGFVTMS+ETELNDAIAALDGQ+++GRAIRVNVAEERPRRG
Sbjct: 268 RGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRG 310
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 183 bits (463), Expect = 7e-045
Identities = 86/103 (83%), Positives = 98/103 (95%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER P+ +EP+FR+YVGNLPW VD+ RLEQVFSEHGKVV+ARVVYDR+T RS
Sbjct: 168 KAAPRGSRPERPPQAFEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRS 227
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRG 309
RGFGFVTMS+ETELNDAIAALDGQ+++GRAIRVNVAEERPRRG
Sbjct: 228 RGFGFVTMSSETELNDAIAALDGQSLDGRAIRVNVAEERPRRG 270
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis
vinifera]
Length = 1122
Score = 181 bits (459), Expect = 2e-044
Identities = 86/102 (84%), Positives = 96/102 (94%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGS+PER PRV+EPAFR+YVGNLPWDVD+ RLEQVFSEHGKVVEARVV+DRETGRS
Sbjct: 1018 KAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRS 1077
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS++TEL DAIAA DGQ ++GR IRVNVAEERPRR
Sbjct: 1078 RGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 1119
>gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 327
Score = 181 bits (459), Expect = 2e-044
Identities = 86/102 (84%), Positives = 96/102 (94%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGS+PER PRV+EPAFR+YVGNLPWDVD+ RLEQVFSEHGKVVEARVV+DRETGRS
Sbjct: 223 KAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRS 282
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS++TEL DAIAA DGQ ++GR IRVNVAEERPRR
Sbjct: 283 RGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 324
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 181 bits (459), Expect = 2e-044
Identities = 86/102 (84%), Positives = 96/102 (94%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGS+PER PRV+EPAFR+YVGNLPWDVD+ RLEQVFSEHGKVVEARVV+DRETGRS
Sbjct: 202 KAAPRGSQPERPPRVFEPAFRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRS 261
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS++TEL DAIAA DGQ ++GR IRVNVAEERPRR
Sbjct: 262 RGFGFVTMSSQTELEDAIAATDGQTLDGRTIRVNVAEERPRR 303
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 179 bits (452), Expect = 1e-043
Identities = 86/101 (85%), Positives = 95/101 (94%)
Frame = +1
Query: 4 AAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSR 183
AAPRGSRPERQPRVY+ AFR+YVGNLPWDVD+GRLE++FSEHGKVV+ARVV DRETGRSR
Sbjct: 189 AAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSR 248
Query: 184 GFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
GFGFV MSNE E+N AIAALDGQN+EGRAI+VNVAEER RR
Sbjct: 249 GFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 179 bits (452), Expect = 1e-043
Identities = 85/104 (81%), Positives = 95/104 (91%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PR YEP+FRVYVGNLPWDVD+ RLEQVFSEHGKV+ ARVV DRETGRS
Sbjct: 186 KAAPRGSRPERAPREYEPSFRVYVGNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRS 245
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
RGF FVTM++E+E+N+AI ALDGQ +EGRAIRVNVAEERPRR F
Sbjct: 246 RGFAFVTMASESEMNEAIGALDGQTLEGRAIRVNVAEERPRRSF 289
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum
crystallinum]
Length = 306
Score = 179 bits (452), Expect = 1e-043
Identities = 85/104 (81%), Positives = 96/104 (92%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PR +EP+ RVYVGNLPWDVDN RLEQVFSEHGKV+ ARVV DRETGRS
Sbjct: 203 KAAPRGSRPERPPREFEPSCRVYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRS 262
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
RGFGFV+M++E+E+NDAIAALDGQ ++GRAIRVNVAEERPRR F
Sbjct: 263 RGFGFVSMASESEMNDAIAALDGQTLDGRAIRVNVAEERPRRAF 306
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 178 bits (449), Expect = 3e-043
Identities = 84/102 (82%), Positives = 96/102 (94%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRG+R +R PR +EPAFR+YVGNLPW VD+ RLEQVFSEHGKVVEARVVYDRETGRS
Sbjct: 196 KAAPRGARVDRPPRAFEPAFRMYVGNLPWQVDDARLEQVFSEHGKVVEARVVYDRETGRS 255
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS +TEL+DAIAALDGQ+++GRAIRVNVAE+RPRR
Sbjct: 256 RGFGFVTMSTQTELDDAIAALDGQSLDGRAIRVNVAEDRPRR 297
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,408,156,835,029
Number of Sequences: 15229318
Number of Extensions: 5408156835029
Number of Successful Extensions: 1269931805
Number of sequences better than 0.0: 0
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