BLASTX 7.6.2
Query= UN50454 /QuerySize=448
(447 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=... 192 1e-048
sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=... 169 7e-042
sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=... 167 3e-041
sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=... 160 4e-039
sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic O... 116 9e-026
sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=... 115 2e-025
sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=... 112 1e-024
sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic O... 112 1e-024
sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic ... 107 2e-023
sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=... 107 3e-023
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=S... 92 1e-018
sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabi... 91 3e-018
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=S... 90 4e-018
sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus ... 89 9e-018
sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorgh... 89 1e-017
sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Bra... 88 2e-017
sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=H... 87 3e-017
sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-ind... 87 5e-017
sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitocho... 86 1e-016
sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabi... 84 2e-016
>sp|Q04836|ROC3_ARATH 31 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP31 PE=1 SV=1
Length = 329
Score = 192 bits (486), Expect = 1e-048
Identities = 94/105 (89%), Positives = 101/105 (96%), Gaps = 1/105 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 225 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 284
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF 312
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 285 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY 329
>sp|P19682|ROC3_NICSY 28 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 276
Score = 169 bits (427), Expect = 7e-042
Identities = 76/102 (74%), Positives = 92/102 (90%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PR ++P +R+YVGN+PWD+D+ RLEQVFSEHGKVV ARVV+DRE+GRS
Sbjct: 172 KAAPRGSRPERAPRTFQPTYRIYVGNIPWDIDDARLEQVFSEHGKVVSARVVFDRESGRS 231
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTMS+E E+++AIA LDGQ ++GR IRVN AEERPRR
Sbjct: 232 RGFGFVTMSSEAEMSEAIANLDGQTLDGRTIRVNAAEERPRR 273
>sp|P28644|ROC1_SPIOL 28 kDa ribonucleoprotein, chloroplastic OS=Spinacia
oleracea PE=1 SV=1
Length = 233
Score = 167 bits (421), Expect = 3e-041
Identities = 84/105 (80%), Positives = 94/105 (89%), Gaps = 2/105 (1%)
Frame = +1
Query: 1 EAAPRGSRPERQPR-VYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGR 177
+AAPRGS PER PR +EP+ RVYVGNLPWDVD RLEQ+FSEHGKVV ARVV DRETGR
Sbjct: 130 KAAPRGS-PERAPRGDFEPSCRVYVGNLPWDVDTSRLEQLFSEHGKVVSARVVSDRETGR 188
Query: 178 SRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
SRGFGFVTMS+E+E+NDAIAALDGQ ++GRA+RVNVAEERPRR F
Sbjct: 189 SRGFGFVTMSSESEVNDAIAALDGQTLDGRAVRVNVAEERPRRAF 233
>sp|P19683|ROC4_NICSY 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
sylvestris PE=1 SV=1
Length = 315
Score = 160 bits (403), Expect = 4e-039
Identities = 73/102 (71%), Positives = 90/102 (88%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AA RG RPER PR +E ++R+YVGN+PW +D+ RLEQ+FSEHGKVV ARVVYDRETGRS
Sbjct: 211 KAARRGERPERPPRTFEQSYRIYVGNIPWGIDDARLEQLFSEHGKVVSARVVYDRETGRS 270
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
RGFGFVTM++E E++DAIA LDGQ+++GR IRVNVAE+R RR
Sbjct: 271 RGFGFVTMASEAEMSDAIANLDGQSLDGRTIRVNVAEDRSRR 312
>sp|Q08937|ROC2_NICSY 29 kDa ribonucleoprotein B, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 291
Score = 116 bits (288), Expect = 9e-026
Identities = 56/94 (59%), Positives = 75/94 (79%)
Frame = +1
Query: 31 RQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSN 210
R R + + RVYVGNL W VD+ L+++FSE G VV+A+VVYDR++GRSRGFGFVT S+
Sbjct: 198 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 257
Query: 211 ETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
E+NDAI +L+G +++GR+IRV+ AEERPRR F
Sbjct: 258 SKEVNDAIDSLNGVDLDGRSIRVSAAEERPRRQF 291
>sp|P49314|ROC2_NICPL 31 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 292
Score = 115 bits (286), Expect = 2e-025
Identities = 56/94 (59%), Positives = 75/94 (79%)
Frame = +1
Query: 31 RQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSN 210
R R + + RVYVGNL W VD+ L+++FSE G VV+A+VVYDR++GRSRGFGFVT S+
Sbjct: 199 RGGRSVDSSNRVYVGNLSWGVDDLALKELFSEQGNVVDAKVVYDRDSGRSRGFGFVTYSS 258
Query: 211 ETELNDAIAALDGQNMEGRAIRVNVAEERPRRGF 312
E+NDAI +L+G +++GR+IRV+ AEERPRR F
Sbjct: 259 AKEVNDAIDSLNGIDLDGRSIRVSAAEERPRRQF 292
>sp|P49313|ROC1_NICPL 30 kDa ribonucleoprotein, chloroplastic OS=Nicotiana
plumbaginifolia PE=2 SV=1
Length = 279
Score = 112 bits (278), Expect = 1e-024
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +1
Query: 46 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELN 225
++ + RVYVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGFVT S+ E+N
Sbjct: 190 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 249
Query: 226 DAIAALDGQNMEGRAIRVNVAEERPRR 306
+AI +LDG ++ GRAIRV+ AE RP R
Sbjct: 250 NAIESLDGVDLNGRAIRVSPAEARPPR 276
>sp|Q08935|ROC1_NICSY 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana
sylvestris PE=2 SV=1
Length = 273
Score = 112 bits (278), Expect = 1e-024
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +1
Query: 46 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELN 225
++ + RVYVGNL W VD LE +FSE GKVV+A+VVYDR++GRSRGFGFVT S+ E+N
Sbjct: 184 FDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTYSSAEEVN 243
Query: 226 DAIAALDGQNMEGRAIRVNVAEERPRR 306
+AI +LDG ++ GRAIRV+ AE RP R
Sbjct: 244 NAIESLDGVDLNGRAIRVSPAEARPPR 270
>sp|Q9ZUU4|ROC1_ARATH Ribonucleoprotein At2g37220, chloroplastic OS=Arabidopsis
thaliana GN=At2g37220 PE=1 SV=1
Length = 289
Score = 107 bits (267), Expect = 2e-023
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
RVYVGNL W VD+ LE +FSE GKVVEARV+YDR++GRS+GFGFVT + E+ +AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 241 LDGQNMEGRAIRVNVAEERPRR 306
LDG +++GR IRV+ AE RP R
Sbjct: 265 LDGADLDGRQIRVSEAEARPPR 286
>sp|Q43349|ROC2_ARATH 29 kDa ribonucleoprotein, chloroplastic OS=Arabidopsis
thaliana GN=RBP29 PE=1 SV=2
Length = 342
Score = 107 bits (266), Expect = 3e-023
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
R+YVGNL W VD+ LE +F+E GKVVEARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 241 LDGQNMEGRAIRVNVAEERPRRG 309
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A OS=Sinapis alba
PE=2 SV=1
Length = 166
Score = 92 bits (227), Expect = 1e-018
Identities = 40/84 (47%), Positives = 61/84 (72%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D+ LE FS++G+V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEERPRRG 309
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding protein 7 OS=Arabidopsis thaliana
GN=GRP7 PE=1 SV=1
Length = 176
Score = 91 bits (223), Expect = 3e-018
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEERPRRG 309
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A OS=Sinapis alba
PE=2 SV=1
Length = 169
Score = 90 bits (222), Expect = 4e-018
Identities = 39/80 (48%), Positives = 58/80 (72%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D LE FS+ G++V+++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEER 297
++GQ+++GR+I VN A+ R
Sbjct: 68 GMNGQDLDGRSITVNEAQSR 87
>sp|Q03878|GRP1_DAUCA Glycine-rich RNA-binding protein OS=Daucus carota PE=2
SV=1
Length = 157
Score = 89 bits (219), Expect = 9e-018
Identities = 40/87 (45%), Positives = 58/87 (66%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W ++ LEQ FS+ G + +++++ DRETGRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDESLEQAFSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEERPRRG 309
AI ++GQ ++GR I VN A+ R G
Sbjct: 63 AIEGMNGQELDGRNITVNEAQSRGSGG 89
>sp|Q99070|GRP2_SORBI Glycine-rich RNA-binding protein 2 OS=Sorghum bicolor
GN=GRP2 PE=2 SV=1
Length = 168
Score = 89 bits (218), Expect = 1e-017
Identities = 40/80 (50%), Positives = 58/80 (72%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W +N LEQ F+ G+V++++V+ DRETGRSRGFGFVT S+E + DAI
Sbjct: 8 YRCFVGGLAWATNNETLEQAFANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEER 297
++G+ ++GR I VN A+ R
Sbjct: 68 NMNGKELDGRNITVNQAQSR 87
>sp|Q05966|GRP10_BRANA Glycine-rich RNA-binding protein 10 OS=Brassica napus
GN=GRP10 PE=2 SV=1
Length = 169
Score = 88 bits (217), Expect = 2e-017
Identities = 38/83 (45%), Positives = 58/83 (69%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W + LE+ FS+ G+V++++++ DRETGRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATGDAELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEER 297
AI ++G+ ++GR I VN A+ R
Sbjct: 63 AIDEMNGKELDGRTITVNEAQSR 85
>sp|Q43472|GRP_HORVU Glycine-rich RNA-binding protein blt801 OS=Hordeum vulgare
GN=blt801 PE=1 SV=1
Length = 161
Score = 87 bits (215), Expect = 3e-017
Identities = 38/84 (45%), Positives = 60/84 (71%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D+ L+ FS++G V++++++ DRETGRSRGFGFVT +++ + AI
Sbjct: 6 YRCFVGGLRWATDDQSLQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIE 65
Query: 238 ALDGQNMEGRAIRVNVAEERPRRG 309
A++GQ+++GR I VN A+ R G
Sbjct: 66 AMNGQDLDGRNITVNEAQSRRSDG 89
>sp|P10979|GRPA_MAIZE Glycine-rich RNA-binding, abscisic acid-inducible protein
OS=Zea mays GN=RAB15 PE=1 SV=1
Length = 157
Score = 87 bits (213), Expect = 5e-017
Identities = 38/80 (47%), Positives = 57/80 (71%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W N LE F+ +G++++++V+ DRETGRSRGFGFVT S+E + DAI
Sbjct: 8 YRCFVGGLAWATSNESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEER 297
++G+ ++GR I VN A+ R
Sbjct: 68 NMNGKELDGRNITVNQAQSR 87
>sp|Q9SVM8|GRP2_ARATH Glycine-rich RNA-binding protein 2, mitochondrial
OS=Arabidopsis thaliana GN=GRP2 PE=1 SV=1
Length = 158
Score = 86 bits (210), Expect = 1e-016
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 241 LDGQNMEGRAIRVNVAEERP 300
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>sp|Q03251|GRP8_ARATH Glycine-rich RNA-binding protein 8 OS=Arabidopsis thaliana
GN=GRP8 PE=1 SV=1
Length = 169
Score = 84 bits (207), Expect = 2e-016
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEERPRRG 309
AI ++G+ ++GR I VN A+ R G
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRGSGG 89
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 187,698,552,422
Number of Sequences: 518415
Number of Extensions: 187698552422
Number of Successful Extensions: 1153387334
Number of sequences better than 0.0: 0
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