BLASTX 7.6.2
Query= UN50454 /QuerySize=448
(447 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 192 8e-050
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 179 1e-045
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 107 3e-024
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 107 4e-024
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 107 4e-024
TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 91 2e-019
TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYC... 91 2e-019
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 91 3e-019
TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP... 91 3e-019
TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD,... 91 3e-019
TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 88 2e-018
TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR... 86 1e-017
TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 86 1e-017
TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-... 86 1e-017
TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine... 86 1e-017
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 84 2e-017
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 84 2e-017
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 84 2e-017
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 192 bits (487), Expect = 8e-050
Identities = 94/106 (88%), Positives = 101/106 (95%), Gaps = 1/106 (0%)
Frame = +1
Query: 1 EAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRS 180
+AAPRGSRPER PRVYEPAFRVYVGNLPWDVDNGRLEQ+FSEHGKVVEARVVYDRETGRS
Sbjct: 225 KAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRS 284
Query: 181 RGFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEER-PRRGF* 315
RGFGFVTMS+ ELN+AI+ALDGQN+EGRAIRVNVAEER PRRG+*
Sbjct: 285 RGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEERPPRRGY* 330
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 179 bits (452), Expect = 1e-045
Identities = 86/101 (85%), Positives = 95/101 (94%)
Frame = +1
Query: 4 AAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSR 183
AAPRGSRPERQPRVY+ AFR+YVGNLPWDVD+GRLE++FSEHGKVV+ARVV DRETGRSR
Sbjct: 189 AAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSR 248
Query: 184 GFGFVTMSNETELNDAIAALDGQNMEGRAIRVNVAEERPRR 306
GFGFV MSNE E+N AIAALDGQN+EGRAI+VNVAEER RR
Sbjct: 249 GFGFVQMSNENEVNVAIAALDGQNLEGRAIKVNVAEERTRR 289
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 107 bits (267), Expect = 3e-024
Identities = 51/82 (62%), Positives = 65/82 (79%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
RVYVGNL W VD+ LE +FSE GKVVEARV+YDR++GRS+GFGFVT + E+ +AI +
Sbjct: 205 RVYVGNLSWGVDDMALESLFSEQGKVVEARVIYDRDSGRSKGFGFVTYDSSQEVQNAIKS 264
Query: 241 LDGQNMEGRAIRVNVAEERPRR 306
LDG +++GR IRV+ AE RP R
Sbjct: 265 LDGADLDGRQIRVSEAEARPPR 286
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 107 bits (266), Expect = 4e-024
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
R+YVGNL W VD+ LE +F+E GKVVEARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 241 LDGQNMEGRAIRVNVAEERPRRG 309
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 84 bits (205), Expect = 4e-017
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +1
Query: 46 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELN 225
+ P +++VGNL ++VD+ +L Q+F G V V+YD+ TGRSRGFGFVTMS E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 226 DAIAALDGQNMEGRAIRVNVAEERPRR 306
A +G EGR +RVN P+R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 107 bits (266), Expect = 4e-024
Identities = 50/83 (60%), Positives = 67/83 (80%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
R+YVGNL W VD+ LE +F+E GKVVEARV+YDR++GRS+GFGFVT+S+ E+ AI +
Sbjct: 258 RLYVGNLSWGVDDMALENLFNEQGKVVEARVIYDRDSGRSKGFGFVTLSSSQEVQKAINS 317
Query: 241 LDGQNMEGRAIRVNVAEERPRRG 309
L+G +++GR IRV+ AE RP RG
Sbjct: 318 LNGADLDGRQIRVSEAEARPPRG 340
Score = 84 bits (205), Expect = 4e-017
Identities = 39/87 (44%), Positives = 54/87 (62%)
Frame = +1
Query: 46 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELN 225
+ P +++VGNL ++VD+ +L Q+F G V V+YD+ TGRSRGFGFVTMS E+
Sbjct: 95 FSPDLKLFVGNLSFNVDSAQLAQLFESAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVE 154
Query: 226 DAIAALDGQNMEGRAIRVNVAEERPRR 306
A +G EGR +RVN P+R
Sbjct: 155 AAAQQFNGYEFEGRPLRVNAGPPPPKR 181
>TAIR9_protein||AT3G23830.1 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 91 bits (225), Expect = 2e-019
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
+++VG L W D+ L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 241 LDGQNMEGRAIRVNVAEER---PRRGF 312
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT3G23830.2 | Symbols: GR-RBP4, GRP4 | GRP4 (GLYCINE-RICH
RNA-BINDING PROTEIN 4); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr3:8606762-8607677 REVERSE
Length = 137
Score = 91 bits (225), Expect = 2e-019
Identities = 45/87 (51%), Positives = 59/87 (67%), Gaps = 3/87 (3%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
+++VG L W D+ L+Q F+ G+V EA V+ DRETGRSRGFGFV+ S E N+AI
Sbjct: 36 KLFVGGLSWGTDDSSLKQAFTSFGEVTEATVIADRETGRSRGFGFVSFSCEDSANNAIKE 95
Query: 241 LDGQNMEGRAIRVNVAEER---PRRGF 312
+DG+ + GR IRVN+A ER PR F
Sbjct: 96 MDGKELNGRQIRVNLATERSSAPRSSF 122
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 91 bits (224), Expect = 3e-019
Identities = 44/90 (48%), Positives = 62/90 (68%)
Frame = +1
Query: 22 RPERQPRVYEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVT 201
+P ++P E +++VGNL W V + L F E G VV ARVV+D +TGRSRG+GFV
Sbjct: 165 KPNKEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVC 224
Query: 202 MSNETELNDAIAALDGQNMEGRAIRVNVAE 291
S++ E+ A+ +LDG +EGRAIRVN+A+
Sbjct: 225 YSSKAEMETALESLDGFELEGRAIRVNLAQ 254
>TAIR9_protein||AT2G21660.1 | Symbols: ATGRP7, CCR2, GR-RBP7, GRP7 | CCR2 (COLD,
CIRCADIAN RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 177
Score = 91 bits (223), Expect = 3e-019
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEERPRRG 309
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT2G21660.2 | Symbols: ATGRP7, CCR2 | CCR2 (COLD, CIRCADIAN
RHYTHM, AND RNA BINDING 2); RNA binding / double-stranded DNA binding /
single-stranded DNA binding | chr2:9265477-9266316 REVERSE
Length = 160
Score = 91 bits (223), Expect = 3e-019
Identities = 39/84 (46%), Positives = 60/84 (71%)
Frame = +1
Query: 58 FRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIA 237
+R +VG L W D+ LE F+++G V++++++ DRETGRSRGFGFVT +E + DAI
Sbjct: 8 YRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIE 67
Query: 238 ALDGQNMEGRAIRVNVAEERPRRG 309
++GQ+++GR+I VN A+ R G
Sbjct: 68 GMNGQDLDGRSITVNEAQSRGSGG 91
>TAIR9_protein||AT4G13850.4 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 130
Score = 88 bits (216), Expect = 2e-018
Identities = 39/84 (46%), Positives = 56/84 (66%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 241 LDGQNMEGRAIRVNVAEERPRRGF 312
+DG+ + GR IRVN A +RP G+
Sbjct: 96 MDGKELNGRHIRVNPANDRPSGGY 119
>TAIR9_protein||AT4G13850.1 | Symbols: ATGRP2, GR-RBP2, GRP2 | GR-RBP2
(GLYCINE-RICH RNA-BINDING PROTEIN 2); ATP binding / RNA binding /
double-stranded DNA binding / single-stranded DNA binding |
chr4:8021314-8022065 FORWARD
Length = 159
Score = 86 bits (210), Expect = 1e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 241 LDGQNMEGRAIRVNVAEERP 300
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.2 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 154
Score = 86 bits (210), Expect = 1e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 241 LDGQNMEGRAIRVNVAEERP 300
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT4G13850.3 | Symbols: ATGRP2 | GR-RBP2 (GLYCINE-RICH
RNA-BINDING PROTEIN 2); ATP binding / RNA binding / double-stranded DNA
binding / single-stranded DNA binding | chr4:8021314-8022065 FORWARD
Length = 145
Score = 86 bits (210), Expect = 1e-017
Identities = 38/80 (47%), Positives = 54/80 (67%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G L W D+ L F+ G VV+A+V+ DRETGRSRGFGFV ++E AI+
Sbjct: 36 KLFIGGLSWGTDDASLRDAFAHFGDVVDAKVIVDRETGRSRGFGFVNFNDEGAATAAISE 95
Query: 241 LDGQNMEGRAIRVNVAEERP 300
+DG+ + GR IRVN A +RP
Sbjct: 96 MDGKELNGRHIRVNPANDRP 115
>TAIR9_protein||AT5G61030.1 | Symbols: GR-RBP3 | GR-RBP3 (glycine-rich
RNA-binding protein 3); ATP binding / RNA binding |
chr5:24560870-24562152 FORWARD
Length = 310
Score = 86 bits (210), Expect = 1e-017
Identities = 36/83 (43%), Positives = 59/83 (71%)
Frame = +1
Query: 61 RVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 240
++++G + + +D L + F+++G+VV+ RV+ DRETGRSRGFGFVT ++ + AI A
Sbjct: 41 KLFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQA 100
Query: 241 LDGQNMEGRAIRVNVAEERPRRG 309
LDG+++ GR ++VN A +R G
Sbjct: 101 LDGRDLHGRVVKVNYANDRTSGG 123
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 84 bits (207), Expect = 2e-017
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEERPRRG 309
AI ++G+ ++GR I VN A+ R G
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRGSGG 89
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 84 bits (207), Expect = 2e-017
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEERPRRG 309
AI ++G+ ++GR I VN A+ R G
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRGSGG 89
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 84 bits (207), Expect = 2e-017
Identities = 37/87 (42%), Positives = 59/87 (67%)
Frame = +1
Query: 49 EPAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNETELND 228
E +R +VG L W ++ L++ FS+ G V++++++ DRE+GRSRGFGFVT +E + D
Sbjct: 3 EVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRD 62
Query: 229 AIAALDGQNMEGRAIRVNVAEERPRRG 309
AI ++G+ ++GR I VN A+ R G
Sbjct: 63 AIEEMNGKELDGRVITVNEAQSRGSGG 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 23,912,720,294
Number of Sequences: 33410
Number of Extensions: 23912720294
Number of Successful Extensions: 750803576
Number of sequences better than 0.0: 0
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